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Tan0003136 (gene) of Snake gourd v1 genome

Gene IDTan0003136
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionAWPM-19-like family protein
Genome locationLG06:75712943..75714615
RNA-Seq ExpressionTan0003136
SyntenyTan0003136
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR008390 - AWPM-19-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147191.1 membrane protein PM19L [Cucumis sativus]2.7e-9195Show/hide
Query:  MAQTMGRNMAAPLLFLNLIMYLILIGFASWCLNRYINGTTYHPSMGGNGATPFFLTFAMLTAVLGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVL
        MAQTMGRNMAAPLLFLNLIMYLIL+GFASWCLNR+INGTTYHPSMGGNGATPFFLTFAMLTAVLG+ASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVL
Subjt:  MAQTMGRNMAAPLLFLNLIMYLILIGFASWCLNRYINGTTYHPSMGGNGATPFFLTFAMLTAVLGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVL

Query:  AFGLACKQISIGGHRGWRLRVVEAFIIILTFTQLFYLLLLHAGIFSRRYGPGYWDTDYGMGGGPAAAGEPPKGPAGTRVV
        AFGLACKQI+IGGHRGWRLRVVEAFIIILTFTQL YLLLLHAGIFSRRYGPGYWDTDYGMGGG AA GEPPKG  GTRVV
Subjt:  AFGLACKQISIGGHRGWRLRVVEAFIIILTFTQLFYLLLLHAGIFSRRYGPGYWDTDYGMGGGPAAAGEPPKGPAGTRVV

XP_008460698.1 PREDICTED: uncharacterized protein LOC103499466 [Cucumis melo]9.4e-9295.56Show/hide
Query:  MAQTMGRNMAAPLLFLNLIMYLILIGFASWCLNRYINGTTYHPSMGGNGATPFFLTFAMLTAVLGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVL
        MAQTMGRNMAAPLLFLNLIMYLIL+GFASWCLNR+INGTTYHPSMGGNGATPFFLTFAMLTAVLG+ASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVL
Subjt:  MAQTMGRNMAAPLLFLNLIMYLILIGFASWCLNRYINGTTYHPSMGGNGATPFFLTFAMLTAVLGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVL

Query:  AFGLACKQISIGGHRGWRLRVVEAFIIILTFTQLFYLLLLHAGIFSRRYGPGYWDTDYGMGGGPAAAGEPPKGPAGTRVV
        AFGLACKQI+IGGHRGWRLRVVEAFIIILTFTQL YLLLLHAGIFSRRYGPGYWDTDYGMGGG AA GEPPKG AGTRVV
Subjt:  AFGLACKQISIGGHRGWRLRVVEAFIIILTFTQLFYLLLLHAGIFSRRYGPGYWDTDYGMGGGPAAAGEPPKGPAGTRVV

XP_022959288.1 uncharacterized protein LOC111460317 [Cucurbita moschata]1.4e-9094.44Show/hide
Query:  MAQTMGRNMAAPLLFLNLIMYLILIGFASWCLNRYINGTTYHPSMGGNGATPFFLTFAMLTAVLGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVL
        MAQTMGRNMAAPLLFLNLIMY IL+GFASWC+NRYINGTTYHPSMGGNGATPFFLTFAMLTAV+GVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVL
Subjt:  MAQTMGRNMAAPLLFLNLIMYLILIGFASWCLNRYINGTTYHPSMGGNGATPFFLTFAMLTAVLGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVL

Query:  AFGLACKQISIGGHRGWRLRVVEAFIIILTFTQLFYLLLLHAGIFSRRYGPGYWDTDYGMGGGPAAAGEPPKGPAGTRVV
        AFGLACKQISIGGHRGWRLRVVEAFIIILT TQL YLLLLHAGIFSRRYGPGYWDTDYGMGGG A  GEPPKG AGTRVV
Subjt:  AFGLACKQISIGGHRGWRLRVVEAFIIILTFTQLFYLLLLHAGIFSRRYGPGYWDTDYGMGGGPAAAGEPPKGPAGTRVV

XP_023549469.1 membrane protein PM19L [Cucurbita pepo subsp. pepo]1.4e-9094.44Show/hide
Query:  MAQTMGRNMAAPLLFLNLIMYLILIGFASWCLNRYINGTTYHPSMGGNGATPFFLTFAMLTAVLGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVL
        MAQTMGRNMAAPLLFLNLIMY IL+GFASWC+NRYINGTTYHPSMGGNGATPFFLTFAMLTAV+GVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVL
Subjt:  MAQTMGRNMAAPLLFLNLIMYLILIGFASWCLNRYINGTTYHPSMGGNGATPFFLTFAMLTAVLGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVL

Query:  AFGLACKQISIGGHRGWRLRVVEAFIIILTFTQLFYLLLLHAGIFSRRYGPGYWDTDYGMGGGPAAAGEPPKGPAGTRVV
        AFGLACKQISIGGHRGWRLRVVEAFIIILT TQL YLLLLHAGIFSRRYGPGYWDTDYGMGGG A  GEPPKG AGTRVV
Subjt:  AFGLACKQISIGGHRGWRLRVVEAFIIILTFTQLFYLLLLHAGIFSRRYGPGYWDTDYGMGGGPAAAGEPPKGPAGTRVV

XP_038874443.1 membrane protein PM19L [Benincasa hispida]2.5e-9296.67Show/hide
Query:  MAQTMGRNMAAPLLFLNLIMYLILIGFASWCLNRYINGTTYHPSMGGNGATPFFLTFAMLTAVLGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVL
        MAQTMGRNMAAPLLF+NLIMYLILIGFASWCLNRYINGTTYHPSMGGNGATPFFLTFAMLTAVLGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVL
Subjt:  MAQTMGRNMAAPLLFLNLIMYLILIGFASWCLNRYINGTTYHPSMGGNGATPFFLTFAMLTAVLGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVL

Query:  AFGLACKQISIGGHRGWRLRVVEAFIIILTFTQLFYLLLLHAGIFSRRYGPGYWDTDYGMGGGPAAAGEPPKGPAGTRVV
        AFGLACKQI+IGGHRGWRLRVVEAFIIILTFTQL YLLLLHAGIFSRRYGPGYWDTDYGMGGG AA GEPPKG AGTRVV
Subjt:  AFGLACKQISIGGHRGWRLRVVEAFIIILTFTQLFYLLLLHAGIFSRRYGPGYWDTDYGMGGGPAAAGEPPKGPAGTRVV

TrEMBL top hitse value%identityAlignment
A0A0A0LI45 Uncharacterized protein1.3e-9195Show/hide
Query:  MAQTMGRNMAAPLLFLNLIMYLILIGFASWCLNRYINGTTYHPSMGGNGATPFFLTFAMLTAVLGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVL
        MAQTMGRNMAAPLLFLNLIMYLIL+GFASWCLNR+INGTTYHPSMGGNGATPFFLTFAMLTAVLG+ASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVL
Subjt:  MAQTMGRNMAAPLLFLNLIMYLILIGFASWCLNRYINGTTYHPSMGGNGATPFFLTFAMLTAVLGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVL

Query:  AFGLACKQISIGGHRGWRLRVVEAFIIILTFTQLFYLLLLHAGIFSRRYGPGYWDTDYGMGGGPAAAGEPPKGPAGTRVV
        AFGLACKQI+IGGHRGWRLRVVEAFIIILTFTQL YLLLLHAGIFSRRYGPGYWDTDYGMGGG AA GEPPKG  GTRVV
Subjt:  AFGLACKQISIGGHRGWRLRVVEAFIIILTFTQLFYLLLLHAGIFSRRYGPGYWDTDYGMGGGPAAAGEPPKGPAGTRVV

A0A1S3CDH8 uncharacterized protein LOC1034994664.6e-9295.56Show/hide
Query:  MAQTMGRNMAAPLLFLNLIMYLILIGFASWCLNRYINGTTYHPSMGGNGATPFFLTFAMLTAVLGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVL
        MAQTMGRNMAAPLLFLNLIMYLIL+GFASWCLNR+INGTTYHPSMGGNGATPFFLTFAMLTAVLG+ASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVL
Subjt:  MAQTMGRNMAAPLLFLNLIMYLILIGFASWCLNRYINGTTYHPSMGGNGATPFFLTFAMLTAVLGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVL

Query:  AFGLACKQISIGGHRGWRLRVVEAFIIILTFTQLFYLLLLHAGIFSRRYGPGYWDTDYGMGGGPAAAGEPPKGPAGTRVV
        AFGLACKQI+IGGHRGWRLRVVEAFIIILTFTQL YLLLLHAGIFSRRYGPGYWDTDYGMGGG AA GEPPKG AGTRVV
Subjt:  AFGLACKQISIGGHRGWRLRVVEAFIIILTFTQLFYLLLLHAGIFSRRYGPGYWDTDYGMGGGPAAAGEPPKGPAGTRVV

A0A6J1CDE2 uncharacterized protein LOC1110097057.1e-8591.11Show/hide
Query:  MAQTMGRNMAAPLLFLNLIMYLILIGFASWCLNRYINGTTYHPSMGGNGATPFFLTFAMLTAVLGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVL
        MAQTMGRNMAAPLLFLNLIMY ILIGFASWCLNRYINGTTYHPSMGGNGATPFFLTFAMLTAVLGVASKLAGLYHIRAWRSDSLAGAGS S++TWAVTVL
Subjt:  MAQTMGRNMAAPLLFLNLIMYLILIGFASWCLNRYINGTTYHPSMGGNGATPFFLTFAMLTAVLGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVL

Query:  AFGLACKQISIGGHRGWRLRVVEAFIIILTFTQLFYLLLLHAGIFSRRYGPGYWDTDYGMGGGPAAAGEPPKGPAGTRVV
        AFGLACK+ISIGGHRGWRLRVVEAFIIIL  TQL Y+LLLHAGIFSR YGPGY +TDYGMGGG  AAGE PKG AGTRVV
Subjt:  AFGLACKQISIGGHRGWRLRVVEAFIIILTFTQLFYLLLLHAGIFSRRYGPGYWDTDYGMGGGPAAAGEPPKGPAGTRVV

A0A6J1H5I7 uncharacterized protein LOC1114603176.6e-9194.44Show/hide
Query:  MAQTMGRNMAAPLLFLNLIMYLILIGFASWCLNRYINGTTYHPSMGGNGATPFFLTFAMLTAVLGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVL
        MAQTMGRNMAAPLLFLNLIMY IL+GFASWC+NRYINGTTYHPSMGGNGATPFFLTFAMLTAV+GVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVL
Subjt:  MAQTMGRNMAAPLLFLNLIMYLILIGFASWCLNRYINGTTYHPSMGGNGATPFFLTFAMLTAVLGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVL

Query:  AFGLACKQISIGGHRGWRLRVVEAFIIILTFTQLFYLLLLHAGIFSRRYGPGYWDTDYGMGGGPAAAGEPPKGPAGTRVV
        AFGLACKQISIGGHRGWRLRVVEAFIIILT TQL YLLLLHAGIFSRRYGPGYWDTDYGMGGG A  GEPPKG AGTRVV
Subjt:  AFGLACKQISIGGHRGWRLRVVEAFIIILTFTQLFYLLLLHAGIFSRRYGPGYWDTDYGMGGGPAAAGEPPKGPAGTRVV

A0A6J1KYX7 uncharacterized protein LOC1114988581.2e-8792.78Show/hide
Query:  MAQTMGRNMAAPLLFLNLIMYLILIGFASWCLNRYINGTTYHPSMGGNGATPFFLTFAMLTAVLGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVL
        MAQTMGRNMAAPLLFLNLIMY IL+GFASWC+NRYINGTTYHPSMGG+  TPFFLTFAMLTAV+GVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVL
Subjt:  MAQTMGRNMAAPLLFLNLIMYLILIGFASWCLNRYINGTTYHPSMGGNGATPFFLTFAMLTAVLGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVL

Query:  AFGLACKQISIGGHRGWRLRVVEAFIIILTFTQLFYLLLLHAGIFSRRYGPGYWDTDYGMGGGPAAAGEPPKGPAGTRVV
        AFGLACKQISIGGHRGWRLRVVEAFIIILT TQL YLLLLHAGIFSRRYGPGYWDTDYGMGGG A  GEPPKG AGTRVV
Subjt:  AFGLACKQISIGGHRGWRLRVVEAFIIILTFTQLFYLLLLHAGIFSRRYGPGYWDTDYGMGGGPAAAGEPPKGPAGTRVV

SwissProt top hitse value%identityAlignment
Q6L4D2 Membrane protein PM19L6.0e-4958.29Show/hide
Query:  MGRNMAAPLLFLNLIMYLILIGFASWCLNRYINGTTYHPSMGGNGATPFFLTFAMLTAVLGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGL
        +GR M APLL LNLIMYLI+IGFASW LN YING T HP + GNGAT +FL FA+L  V+G ASKLAG++H+R+W + SLA   +++L+ WA+T LAFGL
Subjt:  MGRNMAAPLLFLNLIMYLILIGFASWCLNRYINGTTYHPSMGGNGATPFFLTFAMLTAVLGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGL

Query:  ACKQISIGGHRGWRLRVVEAFIIILTFTQLFYLLLLHAGIFSRRYGPGYWDTDYGMGGGPAAAGEPPKGPAGTRV
        ACK+I IGG+RGWRLRV+EAF+IIL FTQL Y+ +LH G+FS  +  G      G  GG   A    K  A  RV
Subjt:  ACKQISIGGHRGWRLRVVEAFIIILTFTQLFYLLLLHAGIFSRRYGPGYWDTDYGMGGGPAAAGEPPKGPAGTRV

Arabidopsis top hitse value%identityAlignment
AT1G04560.1 AWPM-19-like family protein4.2e-6667.2Show/hide
Query:  MAQTMGRNMAAPLLFLNLIMYLILIGFASWCLNRYINGTTYHPSMGGNGATPFFLTFAMLTAVLGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVL
        MA T+GRN+AAPLLFLNL+MYLI++GFASWCLN+YING T HPS GGNGATPFFLTF++L AV+GVASKLAG  HIR WR+DSLA AG++S++ WA+T L
Subjt:  MAQTMGRNMAAPLLFLNLIMYLILIGFASWCLNRYINGTTYHPSMGGNGATPFFLTFAMLTAVLGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVL

Query:  AFGLACKQISIGGHRGWRLRVVEAFIIILTFTQLFYLLLLHAGIFSRRYGPGYWDTDY------GMGGGPAAAGEPPKGPAGTRVV
        A GLACKQI+IGG RGWRL+++EAFIIILTFTQL YL+L+HAG  S +YGPGY D DY      G G  P   GE   G   T  V
Subjt:  AFGLACKQISIGGHRGWRLRVVEAFIIILTFTQLFYLLLLHAGIFSRRYGPGYWDTDY------GMGGGPAAAGEPPKGPAGTRVV

AT1G29520.1 AWPM-19-like family protein5.8e-2340.91Show/hide
Query:  MAQTMGRNMAAPLLFLNLIMYLILIGFASWCLNRYI-NGTTYHPSMG------------GNGATPFFLTFAMLTAVLGVASKLAGLYHIRAWRSDSLAGA
        MA    + +A+ LL LN  MY+I++G   W +NR I +G    P++             GN AT FF+ FA+L  V+G AS ++GL HIR+W   SL  A
Subjt:  MAQTMGRNMAAPLLFLNLIMYLILIGFASWCLNRYI-NGTTYHPSMG------------GNGATPFFLTFAMLTAVLGVASKLAGLYHIRAWRSDSLAGA

Query:  GSTSLLTWAVTVLAFGLACKQISIGGHRGWRLRVVEAFIIILTFTQLFYLLLLH
         + + + W +TVLA G A K+I + G R  +LR +EAF+IIL+ TQL Y+  +H
Subjt:  GSTSLLTWAVTVLAFGLACKQISIGGHRGWRLRVVEAFIIILTFTQLFYLLLLH

AT5G18970.1 AWPM-19-like family protein1.1e-1836.31Show/hide
Query:  MAQTMGRNMAAPLLFLNLIMYLILIGFASWCLNRYINGTTYHPSM-------------GGNGATPFFLTFAMLTAVLGVASKLAGLYHIRAWRSDSLAGA
        MA    ++ A  LL LNL +Y ++   ASW +N  I  T    S               GN AT FF+ F ++  V+G+A+ L G+ ++  W S +L  A
Subjt:  MAQTMGRNMAAPLLFLNLIMYLILIGFASWCLNRYINGTTYHPSM-------------GGNGATPFFLTFAMLTAVLGVASKLAGLYHIRAWRSDSLAGA

Query:  GSTSLLTWAVTVLAFGLACKQISIGGHRGWRLRVVEAFIIILTFTQLFYLLLLHAGI
         ++SL++W++T+LA GLACK+I+IG      LR +E   II++ TQL     +HAG+
Subjt:  GSTSLLTWAVTVLAFGLACKQISIGGHRGWRLRVVEAFIIILTFTQLFYLLLLHAGI

AT5G46530.1 AWPM-19-like family protein6.4e-2238.71Show/hide
Query:  MAQTMGRNMAAPLLFLNLIMYLILIGFASWCLNRYIN-----GTTY---------HPSMGGNGATPFFLTFAMLTAVLGVASKLAGLYHIRAWRSDSLAG
        M +   + +A+ LL LN  MY I++G  +W +N+ IN     G  Y         H  M GN AT FF+ FA++  V G AS ++G+ H+++W + SL  
Subjt:  MAQTMGRNMAAPLLFLNLIMYLILIGFASWCLNRYIN-----GTTY---------HPSMGGNGATPFFLTFAMLTAVLGVASKLAGLYHIRAWRSDSLAG

Query:  AGSTSLLTWAVTVLAFGLACKQISIGGHRGWRLRVVEAFIIILTFTQLFYLLLLH
        A S + + W++T+LA G  CK+I + G R  RLR +EAF+IIL+ TQL Y+  ++
Subjt:  AGSTSLLTWAVTVLAFGLACKQISIGGHRGWRLRVVEAFIIILTFTQLFYLLLLH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCAAACCATGGGAAGAAACATGGCAGCTCCATTGCTGTTTCTCAACTTGATTATGTATTTGATTCTCATAGGTTTTGCTAGTTGGTGTCTTAATAGATACATCAA
TGGCACAACCTACCATCCTAGTATGGGAGGCAACGGAGCGACGCCGTTTTTCCTGACATTTGCAATGCTGACGGCGGTTCTGGGAGTGGCATCTAAACTGGCCGGACTGT
ACCATATCAGAGCTTGGAGGAGCGACAGCCTCGCCGGCGCCGGCTCAACTTCATTGCTCACTTGGGCTGTAACTGTTCTTGCTTTTGGTTTGGCCTGCAAGCAAATCAGC
ATAGGAGGCCACAGAGGGTGGAGGCTGAGAGTGGTGGAAGCTTTCATAATAATATTGACTTTCACTCAGCTTTTCTATCTCCTCTTACTCCACGCCGGAATCTTCAGTCG
CCGCTACGGCCCCGGTTATTGGGACACCGACTACGGCATGGGCGGAGGGCCGGCGGCTGCCGGTGAGCCTCCCAAGGGACCTGCTGGGACAAGGGTAGTTTAG
mRNA sequenceShow/hide mRNA sequence
CTCCTATATAAATCTCATTACTACAAATTTTGGTTGGTATAAGAATGTATTAAAAAAAAGCTACATCTTTATCTGATTTTGGTTTTGAATTTTCATCTTGGAAACTGTTT
TTTTTGGGGGGTTAGAGAGAGAAAAGATGGCTCAAACCATGGGAAGAAACATGGCAGCTCCATTGCTGTTTCTCAACTTGATTATGTATTTGATTCTCATAGGTTTTGCT
AGTTGGTGTCTTAATAGATACATCAATGGCACAACCTACCATCCTAGTATGGGAGGCAACGGAGCGACGCCGTTTTTCCTGACATTTGCAATGCTGACGGCGGTTCTGGG
AGTGGCATCTAAACTGGCCGGACTGTACCATATCAGAGCTTGGAGGAGCGACAGCCTCGCCGGCGCCGGCTCAACTTCATTGCTCACTTGGGCTGTAACTGTTCTTGCTT
TTGGTTTGGCCTGCAAGCAAATCAGCATAGGAGGCCACAGAGGGTGGAGGCTGAGAGTGGTGGAAGCTTTCATAATAATATTGACTTTCACTCAGCTTTTCTATCTCCTC
TTACTCCACGCCGGAATCTTCAGTCGCCGCTACGGCCCCGGTTATTGGGACACCGACTACGGCATGGGCGGAGGGCCGGCGGCTGCCGGTGAGCCTCCCAAGGGACCTGC
TGGGACAAGGGTAGTTTAGAACAGATGGTTGTGTATCATATCATGTCAGTGGCTTTGTTTCTGATCTCTTGTTTTTGTTTTTCTATGTAAGAACATAGTTTCTGGTTTAT
GTCATCTCCTTCAAAACCTTCAATGTAGGATGTTCAATAAGCGATTGGGATCTTTCACATAAGAACAAAGGATGTTGTGTAGTTTGATATGTTTGCTGTGTTTCAGTCA
Protein sequenceShow/hide protein sequence
MAQTMGRNMAAPLLFLNLIMYLILIGFASWCLNRYINGTTYHPSMGGNGATPFFLTFAMLTAVLGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQIS
IGGHRGWRLRVVEAFIIILTFTQLFYLLLLHAGIFSRRYGPGYWDTDYGMGGGPAAAGEPPKGPAGTRVV