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Tan0003139 (gene) of Snake gourd v1 genome

Gene IDTan0003139
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionVoltage-dependent T-type calcium channel subunit alpha-1I (Ca(V)3.3) like
Genome locationLG05:2009561..2009791
RNA-Seq ExpressionTan0003139
SyntenyTan0003139
Gene Ontology termsGO:0006952 - defense response (biological process)
GO:0009607 - response to biotic stimulus (biological process)
GO:0045490 - pectin catabolic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0005516 - calmodulin binding (molecular function)
GO:0030599 - pectinesterase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647058.1 hypothetical protein Csa_023003, partial [Cucumis sativus]1.3e-2184.62Show/hide
Query:  MEAETAVGAILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEPTEPRERSKRRLRALQGPMIHGGD
        MEAETA+ AILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEPT+PRER+KRRLR L G  I G D
Subjt:  MEAETAVGAILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEPTEPRERSKRRLRALQGPMIHGGD

KAG6570773.1 Protein transport protein Sec61 subunit beta, partial [Cucurbita argyrosperma subsp. sororia]2.2e-2193.1Show/hide
Query:  MEAETAVGAILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEPTEPRERSKRRLRALQG
        ME ETAVGAILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEPT+PRERSKRRLR L G
Subjt:  MEAETAVGAILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEPTEPRERSKRRLRALQG

KAG7010620.1 Protein transport protein Sec61 subunit beta, partial [Cucurbita argyrosperma subsp. argyrosperma]5.7e-2280Show/hide
Query:  MEAETAVGAILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEPTEPRERSKRRLRALQGPMIHGGDGGGGFNRDVT
        ME ETAVGAILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEPT+PRERSKRRLR L G    G D    FNR V+
Subjt:  MEAETAVGAILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEPTEPRERSKRRLRALQGPMIHGGDGGGGFNRDVT

TQE00623.1 hypothetical protein C1H46_013750 [Malus baccata]1.7e-1063.33Show/hide
Query:  ETAVGAILGRLGRHCYAVLCLGVLLLTVAVVHYVG-DGEPTEPRERSKRRLRALQGPMIH
        E A G +LGRLGR CYAVLCLGV+L+TV V HYVG + EP +P+ER++RRL A+QG   H
Subjt:  ETAVGAILGRLGRHCYAVLCLGVLLLTVAVVHYVG-DGEPTEPRERSKRRLRALQGPMIH

XP_023512260.1 syntaxin-71-like [Cucurbita pepo subsp. pepo]5.7e-2280Show/hide
Query:  MEAETAVGAILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEPTEPRERSKRRLRALQGPMIHGGDGGGGFNRDVT
        ME ETAVGAILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEPT+PRERSKRRLR L G    G D    FNR V+
Subjt:  MEAETAVGAILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEPTEPRERSKRRLRALQGPMIHGGDGGGGFNRDVT

TrEMBL top hitse value%identityAlignment
A0A0A0KC65 Uncharacterized protein6.1e-2284.62Show/hide
Query:  MEAETAVGAILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEPTEPRERSKRRLRALQGPMIHGGD
        MEAETA+ AILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEPT+PRER+KRRLR L G  I G D
Subjt:  MEAETAVGAILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEPTEPRERSKRRLRALQGPMIHGGD

A0A251NMS2 Uncharacterized protein1.6e-0962Show/hide
Query:  ILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEPTEPRERSKRRLRALQGP
        +LG+LGR CYAVLCLGV++L V +V+YVG  E  +P ER++RRLRA+ GP
Subjt:  ILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEPTEPRERSKRRLRALQGP

A0A540MQW2 Uncharacterized protein8.3e-1163.33Show/hide
Query:  ETAVGAILGRLGRHCYAVLCLGVLLLTVAVVHYVG-DGEPTEPRERSKRRLRALQGPMIH
        E A G +LGRLGR CYAVLCLGV+L+TV V HYVG + EP +P+ER++RRL A+QG   H
Subjt:  ETAVGAILGRLGRHCYAVLCLGVLLLTVAVVHYVG-DGEPTEPRERSKRRLRALQGPMIH

A0A660KR43 MLO-like protein4.1e-1064.71Show/hide
Query:  GAILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEPTEPRERSKRRLRALQG
        G +LG+LGR CYAVLCLGVLL++V + H V   EPT+PRER+ RRLR L+G
Subjt:  GAILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEPTEPRERSKRRLRALQG

A0A7N2KN99 Uncharacterized protein4.1e-1065.38Show/hide
Query:  VGAILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEPTEPRERSKRRLRALQG
        V  +LG+L RHCYAVLCLGVLLL+V + HYV   EP++PRER+ RRLRA  G
Subjt:  VGAILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEPTEPRERSKRRLRALQG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGCGGAGACGGCGGTGGGGGCGATTCTGGGGAGGCTAGGGCGCCATTGCTATGCGGTGTTGTGTTTGGGAGTGCTTCTTTTAACGGTTGCCGTCGTTCACTACGT
CGGCGACGGCGAGCCGACCGAGCCGCGCGAGCGAAGCAAGCGCCGCCTTCGGGCTTTGCAGGGCCCGATGATTCACGGCGGCGATGGCGGCGGCGGTTTCAATCGTGATG
TTACGTTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGCGGAGACGGCGGTGGGGGCGATTCTGGGGAGGCTAGGGCGCCATTGCTATGCGGTGTTGTGTTTGGGAGTGCTTCTTTTAACGGTTGCCGTCGTTCACTACGT
CGGCGACGGCGAGCCGACCGAGCCGCGCGAGCGAAGCAAGCGCCGCCTTCGGGCTTTGCAGGGCCCGATGATTCACGGCGGCGATGGCGGCGGCGGTTTCAATCGTGATG
TTACGTTGTGA
Protein sequenceShow/hide protein sequence
MEAETAVGAILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEPTEPRERSKRRLRALQGPMIHGGDGGGGFNRDVTL