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Tan0003154 (gene) of Snake gourd v1 genome

Gene IDTan0003154
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionTransmembrane protein 230
Genome locationLG09:69094262..69095171
RNA-Seq ExpressionTan0003154
SyntenyTan0003154
Gene Ontology termsGO:0005768 - endosome (cellular component)
GO:0005776 - autophagosome (cellular component)
GO:0005794 - Golgi apparatus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR008590 - Transmembrane protein 230/134
IPR044234 - Transmembrane protein 230


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7021684.1 Transmembrane protein-like protein [Cucurbita argyrosperma subsp. argyrosperma]2.8e-4897.09Show/hide
Query:  MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVALLVFGMIGIVVGIFMASNRVGGDRAHGVFFSLLGAVLFIPGFYYTRIAYYAYKGYKGFSFSNI
        MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAV+LL FGMIGIVVGIFMASNRVGGDRAHGVFFSLLGA+LFIPGFYYTRIAYYAYKGYKGFSFSNI
Subjt:  MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVALLVFGMIGIVVGIFMASNRVGGDRAHGVFFSLLGAVLFIPGFYYTRIAYYAYKGYKGFSFSNI

Query:  PPV
        PPV
Subjt:  PPV

XP_004146339.1 transmembrane protein 230 [Cucumis sativus]3.1e-4794.17Show/hide
Query:  MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVALLVFGMIGIVVGIFMASNRVGGDRAHGVFFSLLGAVLFIPGFYYTRIAYYAYKGYKGFSFSNI
        MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAV+LLVFGMIGI+VG FMASNRVGGDR HGVFFSLLG +LFIPGFYYTRIAYYAYKGYKGFSFSNI
Subjt:  MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVALLVFGMIGIVVGIFMASNRVGGDRAHGVFFSLLGAVLFIPGFYYTRIAYYAYKGYKGFSFSNI

Query:  PPV
        PPV
Subjt:  PPV

XP_008453547.1 PREDICTED: transmembrane protein 230-like [Cucumis melo]1.1e-4795.15Show/hide
Query:  MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVALLVFGMIGIVVGIFMASNRVGGDRAHGVFFSLLGAVLFIPGFYYTRIAYYAYKGYKGFSFSNI
        MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAV+LLVFGMIGI+VG FMASNRVGGDRAHGVFFSLLG +LFIPGFYYTRIAYYAYKGYKGFSFSNI
Subjt:  MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVALLVFGMIGIVVGIFMASNRVGGDRAHGVFFSLLGAVLFIPGFYYTRIAYYAYKGYKGFSFSNI

Query:  PPV
        PPV
Subjt:  PPV

XP_022931504.1 transmembrane protein 230-like [Cucurbita moschata]3.7e-4896.12Show/hide
Query:  MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVALLVFGMIGIVVGIFMASNRVGGDRAHGVFFSLLGAVLFIPGFYYTRIAYYAYKGYKGFSFSNI
        MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAV+LL FGMIGI+VGIFMASNRVGGDRAHGVFFSLLGA+LFIPGFYYTRIAYYAYKGYKGFSFSNI
Subjt:  MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVALLVFGMIGIVVGIFMASNRVGGDRAHGVFFSLLGAVLFIPGFYYTRIAYYAYKGYKGFSFSNI

Query:  PPV
        PPV
Subjt:  PPV

XP_038879685.1 transmembrane protein 230 [Benincasa hispida]2.8e-4897.09Show/hide
Query:  MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVALLVFGMIGIVVGIFMASNRVGGDRAHGVFFSLLGAVLFIPGFYYTRIAYYAYKGYKGFSFSNI
        MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAV+LLVFGMIGIVVG FMASNRVGGDRAHGVFFSLLGA+LFIPGFYYTRIAYYAYKGYKGFSFSNI
Subjt:  MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVALLVFGMIGIVVGIFMASNRVGGDRAHGVFFSLLGAVLFIPGFYYTRIAYYAYKGYKGFSFSNI

Query:  PPV
        PPV
Subjt:  PPV

TrEMBL top hitse value%identityAlignment
A0A0A0LUC1 Transmembrane protein 2301.5e-4794.17Show/hide
Query:  MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVALLVFGMIGIVVGIFMASNRVGGDRAHGVFFSLLGAVLFIPGFYYTRIAYYAYKGYKGFSFSNI
        MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAV+LLVFGMIGI+VG FMASNRVGGDR HGVFFSLLG +LFIPGFYYTRIAYYAYKGYKGFSFSNI
Subjt:  MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVALLVFGMIGIVVGIFMASNRVGGDRAHGVFFSLLGAVLFIPGFYYTRIAYYAYKGYKGFSFSNI

Query:  PPV
        PPV
Subjt:  PPV

A0A1S3BWL2 Transmembrane protein 2305.2e-4895.15Show/hide
Query:  MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVALLVFGMIGIVVGIFMASNRVGGDRAHGVFFSLLGAVLFIPGFYYTRIAYYAYKGYKGFSFSNI
        MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAV+LLVFGMIGI+VG FMASNRVGGDRAHGVFFSLLG +LFIPGFYYTRIAYYAYKGYKGFSFSNI
Subjt:  MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVALLVFGMIGIVVGIFMASNRVGGDRAHGVFFSLLGAVLFIPGFYYTRIAYYAYKGYKGFSFSNI

Query:  PPV
        PPV
Subjt:  PPV

A0A6J1EUE9 Transmembrane protein 2301.8e-4896.12Show/hide
Query:  MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVALLVFGMIGIVVGIFMASNRVGGDRAHGVFFSLLGAVLFIPGFYYTRIAYYAYKGYKGFSFSNI
        MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAV+LL FGMIGI+VGIFMASNRVGGDRAHGVFFSLLGA+LFIPGFYYTRIAYYAYKGYKGFSFSNI
Subjt:  MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVALLVFGMIGIVVGIFMASNRVGGDRAHGVFFSLLGAVLFIPGFYYTRIAYYAYKGYKGFSFSNI

Query:  PPV
        PPV
Subjt:  PPV

A0A6J1I4W8 Transmembrane protein 2301.8e-4896.12Show/hide
Query:  MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVALLVFGMIGIVVGIFMASNRVGGDRAHGVFFSLLGAVLFIPGFYYTRIAYYAYKGYKGFSFSNI
        MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAV+LL FGMIGI+VGIFMASNRVGGDRAHGVFFSLLGA+LFIPGFYYTRIAYYAYKGYKGFSFSNI
Subjt:  MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVALLVFGMIGIVVGIFMASNRVGGDRAHGVFFSLLGAVLFIPGFYYTRIAYYAYKGYKGFSFSNI

Query:  PPV
        PPV
Subjt:  PPV

A0A6J1JDX9 Transmembrane protein 2307.4e-4794.17Show/hide
Query:  MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVALLVFGMIGIVVGIFMASNRVGGDRAHGVFFSLLGAVLFIPGFYYTRIAYYAYKGYKGFSFSNI
        MAYVDHAFSI DEDI+MDSPF VNNRPPIKEIALAV+LLVFGMIGIVVG FMASNRVGGDRAHGVFFSLLGA+LFIPGFYYTRIAYYAYKGYKGFSFSNI
Subjt:  MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVALLVFGMIGIVVGIFMASNRVGGDRAHGVFFSLLGAVLFIPGFYYTRIAYYAYKGYKGFSFSNI

Query:  PPV
        PPV
Subjt:  PPV

SwissProt top hitse value%identityAlignment
Q5BJP5 Transmembrane protein 2307.0e-1045.45Show/hide
Query:  PIKEIALAVALLVFGMIGIVVGIFMASNRV---GGDRAHGVFFSLLGAVLFIPGFYYTRIAYYAYKGYKGFSFSNIP
        P K IALA  L + G   I++G  + S  +   G DRA  V   ++G ++F+PGFY+ RIAYYA KGY+G+S+ +IP
Subjt:  PIKEIALAVALLVFGMIGIVVGIFMASNRV---GGDRAHGVFFSLLGAVLFIPGFYYTRIAYYAYKGYKGFSFSNIP

Q5R8X3 Transmembrane protein 2307.0e-1045.45Show/hide
Query:  PIKEIALAVALLVFGMIGIVVGIFMASNRV---GGDRAHGVFFSLLGAVLFIPGFYYTRIAYYAYKGYKGFSFSNIP
        P K IALA  L + G   I++G  + S  +   G DRA  V   ++G ++F+PGFY+ RIAYYA KGY+G+S+ +IP
Subjt:  PIKEIALAVALLVFGMIGIVVGIFMASNRV---GGDRAHGVFFSLLGAVLFIPGFYYTRIAYYAYKGYKGFSFSNIP

Q5ZLH4 Transmembrane protein 2307.0e-1045.45Show/hide
Query:  PIKEIALAVALLVFGMIGIVVGIFMASNRV---GGDRAHGVFFSLLGAVLFIPGFYYTRIAYYAYKGYKGFSFSNIP
        P K IALAV L + G   I++G  + +  +   G DRA  V   ++G ++F+PGFY+ RIAYYA KGY+G+S+ +IP
Subjt:  PIKEIALAVALLVFGMIGIVVGIFMASNRV---GGDRAHGVFFSLLGAVLFIPGFYYTRIAYYAYKGYKGFSFSNIP

Q8CIB6 Transmembrane protein 2307.0e-1045.45Show/hide
Query:  PIKEIALAVALLVFGMIGIVVGIFMASNRV---GGDRAHGVFFSLLGAVLFIPGFYYTRIAYYAYKGYKGFSFSNIP
        P K IALA  L + G   I++G  + S  +   G DRA  V   ++G ++F+PGFY+ RIAYYA KGY+G+S+ +IP
Subjt:  PIKEIALAVALLVFGMIGIVVGIFMASNRV---GGDRAHGVFFSLLGAVLFIPGFYYTRIAYYAYKGYKGFSFSNIP

Q96A57 Transmembrane protein 2307.0e-1045.45Show/hide
Query:  PIKEIALAVALLVFGMIGIVVGIFMASNRV---GGDRAHGVFFSLLGAVLFIPGFYYTRIAYYAYKGYKGFSFSNIP
        P K IALA  L + G   I++G  + S  +   G DRA  V   ++G ++F+PGFY+ RIAYYA KGY+G+S+ +IP
Subjt:  PIKEIALAVALLVFGMIGIVVGIFMASNRV---GGDRAHGVFFSLLGAVLFIPGFYYTRIAYYAYKGYKGFSFSNIP

Arabidopsis top hitse value%identityAlignment
AT2G19350.1 Eukaryotic protein of unknown function (DUF872)1.1e-4277.67Show/hide
Query:  MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVALLVFGMIGIVVGIFMASNRVGGDRAHGVFFSLLGAVLFIPGFYYTRIAYYAYKGYKGFSFSNI
        MAYVDHAFSI+DED+M+ + +TV+NRPP+KEI+LAV LLVFG +GIV+G FMA NRVGGDR HG+FF +LG +LFIPGFYYTRIAYYAYKGYKGFSFSNI
Subjt:  MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVALLVFGMIGIVVGIFMASNRVGGDRAHGVFFSLLGAVLFIPGFYYTRIAYYAYKGYKGFSFSNI

Query:  PPV
        P V
Subjt:  PPV

AT3G29170.1 Eukaryotic protein of unknown function (DUF872)3.8e-1142.86Show/hide
Query:  NRPPIKEIALAVALLVFGMIGIVVGIFMASNRVGGDRAHGVFFSLLGAVLFIPGFYYTRIAYYAYKGYKGFSFSNIP
        +R P K IALAV LL  G + +++  F+    + GD + G    +LG + F+PGFY TRIAYY+++G +G+ F+ IP
Subjt:  NRPPIKEIALAVALLVFGMIGIVVGIFMASNRVGGDRAHGVFFSLLGAVLFIPGFYYTRIAYYAYKGYKGFSFSNIP

AT4G29850.1 Eukaryotic protein of unknown function (DUF872)1.1e-4583.5Show/hide
Query:  MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVALLVFGMIGIVVGIFMASNRVGGDRAHGVFFSLLGAVLFIPGFYYTRIAYYAYKGYKGFSFSNI
        MAYVDHAFSITDEDIM+++ +TVNNRPP+KEIALAVALLVFG +GIV G FMA NRVGGDR HG+FF +LG +LFIPGFYYTRIAYYAYKGYKGFSFSNI
Subjt:  MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVALLVFGMIGIVVGIFMASNRVGGDRAHGVFFSLLGAVLFIPGFYYTRIAYYAYKGYKGFSFSNI

Query:  PPV
        PPV
Subjt:  PPV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTACGTGGACCATGCGTTTTCGATAACAGATGAAGACATTATGATGGATTCTCCCTTCACCGTCAACAATCGGCCTCCTATCAAGGAGATCGCTCTTGCCGTTGC
TCTTCTCGTTTTTGGCATGATTGGAATCGTCGTTGGTATCTTCATGGCCAGTAATCGAGTCGGCGGTGATCGTGCTCACGGGGTGTTCTTCTCGTTGTTGGGTGCTGTCT
TGTTTATTCCGGGTTTCTATTACACGCGGATTGCTTACTATGCTTACAAGGGTTACAAGGGCTTCTCCTTCTCCAACATACCCCCTGTCTAG
mRNA sequenceShow/hide mRNA sequence
CTTTTACTTTCCTTACGCCGACGTGGAAGTTTTTGCCTTTCTTTTCACTTCACCTCCTCTCAGAGTCAAAAACAGCCTGAGAGCTTATCTTTGCTTCAAAATCAAAATTC
CACCGTCGTCGTCGCCGCCGCCTTCTTCACCGAATCCGACACCTCTTTTTCTGCAGATCGAAGCTTCAACACCTTCTTCTTCCTTCAACCCTAGATCTCCGACAGTTACA
GACAAAGATGGCTTACGTGGACCATGCGTTTTCGATAACAGATGAAGACATTATGATGGATTCTCCCTTCACCGTCAACAATCGGCCTCCTATCAAGGAGATCGCTCTTG
CCGTTGCTCTTCTCGTTTTTGGCATGATTGGAATCGTCGTTGGTATCTTCATGGCCAGTAATCGAGTCGGCGGTGATCGTGCTCACGGGGTGTTCTTCTCGTTGTTGGGT
GCTGTCTTGTTTATTCCGGGTTTCTATTACACGCGGATTGCTTACTATGCTTACAAGGGTTACAAGGGCTTCTCCTTCTCCAACATACCCCCTGTCTAGATTCTCCAAGT
TCCGACCACTTCTCTACACTTGTACAGATTTTCTTCACTGTCTACGTTGTTTCCCCCTCCAGTCTCTCTTTTTACTACCAATAACACTGTGTCCGATTACTGTCGTTGAA
GGGTGAAGGATTCTATATGAATTTGCGTTGTGCATTATCGAGATAGTTCTGCTTTTTTTAAGTTTCACTTCGTACGATAAATGCCTCTATTATATACATAGTAAATTTCA
GAGTATAATCGAGTCTTTTATCTATATAATCTGAAGTTTCGTTACT
Protein sequenceShow/hide protein sequence
MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVALLVFGMIGIVVGIFMASNRVGGDRAHGVFFSLLGAVLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV