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Tan0003159 (gene) of Snake gourd v1 genome

Gene IDTan0003159
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionLOW QUALITY PROTEIN: uncharacterized protein LOC110412324
Genome locationLG07:12124203..12125460
RNA-Seq ExpressionTan0003159
SyntenyTan0003159
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605919.1 hypothetical protein SDJN03_03236, partial [Cucurbita argyrosperma subsp. sororia]6.9e-6682.66Show/hide
Query:  MRLWLIISSQMLSLHSLFNRNQRPPLLATKKCSDVLKRIKRGYPFPSSASRCCIVCSRETDSQQFEVDPDKARQALQELDQQLQSFSKKRVTPPKNK-VQ
        MRLWLI SSQMLSLHSLFN+N RPPLLATKK SD LK  K+ +P P  ASR CIVCS+ETDSQQFEVDPDKARQALQELDQQLQSFSKKR TPPK K V+
Subjt:  MRLWLIISSQMLSLHSLFNRNQRPPLLATKKCSDVLKRIKRGYPFPSSASRCCIVCSRETDSQQFEVDPDKARQALQELDQQLQSFSKKRVTPPKNK-VQ

Query:  GMKLPRDQMKGEMAEISGSFLANSAVVLFIFSIFYNVLFYTVIKPSIDGPLSSSISSQRQSTEPPVLQQLPLS
        G KLPRDQM+GEMAE+S SFLANSAVVLFIFSIFYNVLFY VIKPSID PL SSISS+ QSTEPPVLQ LP S
Subjt:  GMKLPRDQMKGEMAEISGSFLANSAVVLFIFSIFYNVLFYTVIKPSIDGPLSSSISSQRQSTEPPVLQQLPLS

KAG7035867.1 hypothetical protein SDJN02_02666 [Cucurbita argyrosperma subsp. argyrosperma]1.1e-6882.51Show/hide
Query:  MRLWLIISSQMLSLHSLFNRNQRPPLLATKKCSDVLKRIKRGYPFPSSASRCCIVCSRETDSQQFEVDPDKARQALQELDQQLQSFSKKRVTPPKNK-VQ
        MRLWLI SSQMLSLHSLFN+N RPPLLATKK SD LK  K+ +P P  ASR CIVCS+ETDSQQFEVDPDKARQALQELDQQLQSFSKKR TPPK K V+
Subjt:  MRLWLIISSQMLSLHSLFNRNQRPPLLATKKCSDVLKRIKRGYPFPSSASRCCIVCSRETDSQQFEVDPDKARQALQELDQQLQSFSKKRVTPPKNK-VQ

Query:  GMKLPRDQMKGEMAEISGSFLANSAVVLFIFSIFYNVLFYTVIKPSIDGPLSSSISSQRQSTEPPVLQQLPLSISLFLSPSLL
        G KLPRDQM+GEMAE+S SFLANSAVVLFIFSIFYNVLFY VIKPSID PL SSISS+ QSTEPPVLQ LP S SLF+SPSLL
Subjt:  GMKLPRDQMKGEMAEISGSFLANSAVVLFIFSIFYNVLFYTVIKPSIDGPLSSSISSQRQSTEPPVLQQLPLSISLFLSPSLL

XP_022996085.1 uncharacterized protein LOC111491401 [Cucurbita maxima]6.7e-6982.51Show/hide
Query:  MRLWLIISSQMLSLHSLFNRNQRPPLLATKKCSDVLKRIKRGYPFPSSASRCCIVCSRETDSQQFEVDPDKARQALQELDQQLQSFSKKRVTPPKNK-VQ
        MRLWLI SSQMLSLHSL N+N RPPLLATKK SDVLK  K+ +PFPS ASR CIVCS+ETDSQQFEVDPDKARQALQELDQQLQSFSKKR TPPK K V+
Subjt:  MRLWLIISSQMLSLHSLFNRNQRPPLLATKKCSDVLKRIKRGYPFPSSASRCCIVCSRETDSQQFEVDPDKARQALQELDQQLQSFSKKRVTPPKNK-VQ

Query:  GMKLPRDQMKGEMAEISGSFLANSAVVLFIFSIFYNVLFYTVIKPSIDGPLSSSISSQRQSTEPPVLQQLPLSISLFLSPSLL
        G KLPRDQM+GEMAE+S SFLANSAVVLFIFSIFYNVLFY VIKPSID PL SS SS+ Q+TEPPVLQ LP S SLF+SPSLL
Subjt:  GMKLPRDQMKGEMAEISGSFLANSAVVLFIFSIFYNVLFYTVIKPSIDGPLSSSISSQRQSTEPPVLQQLPLSISLFLSPSLL

XP_023533692.1 uncharacterized protein LOC111795475 [Cucurbita pepo subsp. pepo]5.1e-6983.06Show/hide
Query:  MRLWLIISSQMLSLHSLFNRNQRPPLLATKKCSDVLKRIKRGYPFPSSASRCCIVCSRETDSQQFEVDPDKARQALQELDQQLQSFSKKRVTPPKNK-VQ
        MRLWLI SSQMLSLHSL N+N RPPLLATKK S VLK  K+ +PFPS ASR CIVCS+ETDSQQFEVDPDKARQALQELDQQLQSFSKKR TPPKNK V+
Subjt:  MRLWLIISSQMLSLHSLFNRNQRPPLLATKKCSDVLKRIKRGYPFPSSASRCCIVCSRETDSQQFEVDPDKARQALQELDQQLQSFSKKRVTPPKNK-VQ

Query:  GMKLPRDQMKGEMAEISGSFLANSAVVLFIFSIFYNVLFYTVIKPSIDGPLSSSISSQRQSTEPPVLQQLPLSISLFLSPSLL
        G KLPRDQM+GEMAE+S SFLANSAVVLFIFSIFYNVLFY VIKPSID PL S ISS+ QSTEPPVLQ LP S SLF+SPSLL
Subjt:  GMKLPRDQMKGEMAEISGSFLANSAVVLFIFSIFYNVLFYTVIKPSIDGPLSSSISSQRQSTEPPVLQQLPLSISLFLSPSLL

XP_038901592.1 uncharacterized protein LOC120088397 [Benincasa hispida]9.6e-6879.35Show/hide
Query:  MRLWLIISSQMLSLHSLFNRNQRPPLLATKKCSDVLKRIKRGYPFPSSASRCCIVCSRETDSQQFEVDPDKARQALQELDQQLQSFSKKRVTPPKNKVQG
        MR WLIISSQMLSL SLFN+NQRPPL+ATKKCSD + R +  +P   SASR CI+C+RETDSQQFEVDPDKARQALQELDQQL+SFSKK+VT PK KVQ 
Subjt:  MRLWLIISSQMLSLHSLFNRNQRPPLLATKKCSDVLKRIKRGYPFPSSASRCCIVCSRETDSQQFEVDPDKARQALQELDQQLQSFSKKRVTPPKNKVQG

Query:  MKLPRDQMKGEMAEISGSFLANSAVVLFIFSIFYNVLFYTVIKPSIDGPLSSSISS--QRQSTEPPVLQQLPLSISLFLSPSLL
        MKLPR QM+GEM EI+G+ LANSAVVLFIFSIFYNVLFYTVIKPSIDGPL SSISS  +++STEPPVLQQLPLS S+F+SPSLL
Subjt:  MKLPRDQMKGEMAEISGSFLANSAVVLFIFSIFYNVLFYTVIKPSIDGPLSSSISS--QRQSTEPPVLQQLPLSISLFLSPSLL

TrEMBL top hitse value%identityAlignment
A0A0A0KH36 Uncharacterized protein1.1e-5370.86Show/hide
Query:  MLSLHSLFNRNQRPPLLATKKCSDVLKRIKRGYPFPSSASRCCIVCSRETDSQQFEVDPDKARQALQELDQQLQSFSKKRVTPPKNK-VQGMKLPRDQMK
        MLSL SLFN+N RPP + TKKCSD + +I++ +P   SAS   I+C++E+DSQQFEVDPDKARQALQELDQQLQSFSKK+V+ PK K VQ M +PR QM+
Subjt:  MLSLHSLFNRNQRPPLLATKKCSDVLKRIKRGYPFPSSASRCCIVCSRETDSQQFEVDPDKARQALQELDQQLQSFSKKRVTPPKNK-VQGMKLPRDQMK

Query:  GEMAEISGSFLANSAVVLFIFSIFYNVLFYTVIKPSIDGPLSSSISS--QRQSTEPPVLQQLPLSISLFLSPSLL
        GEM EIS + LANSAVVLFIFSIFYNVLFYTVIKPSID PL SSISS  +++ST+P VLQQLPLS S+ +SPSLL
Subjt:  GEMAEISGSFLANSAVVLFIFSIFYNVLFYTVIKPSIDGPLSSSISS--QRQSTEPPVLQQLPLSISLFLSPSLL

A0A1S3BNA1 uncharacterized protein LOC1034915053.7e-5773.71Show/hide
Query:  MLSLHSLFNRNQRPPLLATKKCSDVLKRIKRGYPFPSSASRCCIVCSRETDSQQFEVDPDKARQALQELDQQLQSFSKKRVTPPKNK-VQGMKLPRDQMK
        MLSL S FN+NQRPP +ATKKCSD + +I++ +PF  SAS   I+C+RE+DSQQFEVDPDKARQALQELDQQLQSFSKK+V+ PK K VQ M LPR QM+
Subjt:  MLSLHSLFNRNQRPPLLATKKCSDVLKRIKRGYPFPSSASRCCIVCSRETDSQQFEVDPDKARQALQELDQQLQSFSKKRVTPPKNK-VQGMKLPRDQMK

Query:  GEMAEISGSFLANSAVVLFIFSIFYNVLFYTVIKPSIDGPLSSSISS--QRQSTEPPVLQQLPLSISLFLSPSLL
        GEM EI G+ LANSAVVLFIFSIFYNVLFYTVIKPSIDGPL SSISS  +++ST P VLQQLPLS S+ +SPSLL
Subjt:  GEMAEISGSFLANSAVVLFIFSIFYNVLFYTVIKPSIDGPLSSSISS--QRQSTEPPVLQQLPLSISLFLSPSLL

A0A5D3BB07 Uncharacterized protein3.7e-5773.71Show/hide
Query:  MLSLHSLFNRNQRPPLLATKKCSDVLKRIKRGYPFPSSASRCCIVCSRETDSQQFEVDPDKARQALQELDQQLQSFSKKRVTPPKNK-VQGMKLPRDQMK
        MLSL S FN+NQRPP +ATKKCSD + +I++ +PF  SAS   I+C+RE+DSQQFEVDPDKARQALQELDQQLQSFSKK+V+ PK K VQ M LPR QM+
Subjt:  MLSLHSLFNRNQRPPLLATKKCSDVLKRIKRGYPFPSSASRCCIVCSRETDSQQFEVDPDKARQALQELDQQLQSFSKKRVTPPKNK-VQGMKLPRDQMK

Query:  GEMAEISGSFLANSAVVLFIFSIFYNVLFYTVIKPSIDGPLSSSISS--QRQSTEPPVLQQLPLSISLFLSPSLL
        GEM EI G+ LANSAVVLFIFSIFYNVLFYTVIKPSIDGPL SSISS  +++ST P VLQQLPLS S+ +SPSLL
Subjt:  GEMAEISGSFLANSAVVLFIFSIFYNVLFYTVIKPSIDGPLSSSISS--QRQSTEPPVLQQLPLSISLFLSPSLL

A0A6J1D5V3 uncharacterized protein LOC1110173188.5e-6276.57Show/hide
Query:  MLSLHSLFNRNQ----RPPLLATKKCSDVLKRIKRGYPFPSSASRCCIVCSRETDSQQFEVDPDKARQALQELDQQLQSFSKKRVTPPKNKVQGMKLPRD
        MLSLHSLFN+NQ     PPL ATKKC  VL+R + G+PFPSSA+R CIVC+RE DSQQFE+DPDKARQALQELDQQLQSFSKK+VTPPK K Q MKLPR+
Subjt:  MLSLHSLFNRNQ----RPPLLATKKCSDVLKRIKRGYPFPSSASRCCIVCSRETDSQQFEVDPDKARQALQELDQQLQSFSKKRVTPPKNKVQGMKLPRD

Query:  QMKGEMAEISGSFLANSAVVLFIFSIFYNVLFYTVIKPSIDGPLSSSISSQRQSTEPPVLQQLPLSISLFLSPSL
        Q++GEM+EISGS LANSAV LFIFSI YNVLFYTVIKPSIDGPL+SSISS+R+ TEPPVLQQLPLS     S  L
Subjt:  QMKGEMAEISGSFLANSAVVLFIFSIFYNVLFYTVIKPSIDGPLSSSISSQRQSTEPPVLQQLPLSISLFLSPSL

A0A6J1K5Q9 uncharacterized protein LOC1114914013.2e-6982.51Show/hide
Query:  MRLWLIISSQMLSLHSLFNRNQRPPLLATKKCSDVLKRIKRGYPFPSSASRCCIVCSRETDSQQFEVDPDKARQALQELDQQLQSFSKKRVTPPKNK-VQ
        MRLWLI SSQMLSLHSL N+N RPPLLATKK SDVLK  K+ +PFPS ASR CIVCS+ETDSQQFEVDPDKARQALQELDQQLQSFSKKR TPPK K V+
Subjt:  MRLWLIISSQMLSLHSLFNRNQRPPLLATKKCSDVLKRIKRGYPFPSSASRCCIVCSRETDSQQFEVDPDKARQALQELDQQLQSFSKKRVTPPKNK-VQ

Query:  GMKLPRDQMKGEMAEISGSFLANSAVVLFIFSIFYNVLFYTVIKPSIDGPLSSSISSQRQSTEPPVLQQLPLSISLFLSPSLL
        G KLPRDQM+GEMAE+S SFLANSAVVLFIFSIFYNVLFY VIKPSID PL SS SS+ Q+TEPPVLQ LP S SLF+SPSLL
Subjt:  GMKLPRDQMKGEMAEISGSFLANSAVVLFIFSIFYNVLFYTVIKPSIDGPLSSSISSQRQSTEPPVLQQLPLSISLFLSPSLL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G01870.1 unknown protein2.8e-1250Show/hide
Query:  FEVDPDKARQALQELDQQLQSFS--KKRVTPPKNKVQGMKLPRDQ-MKGEMAEISGSFLANSAVVLFIFSIFYNVLFYTVIKPSIDGPLS
        F++D DKAR+AL++LDQQ++S +  K R+   K     ++   D  M  E  EISGSFL +SA VL   ++FYN+LF TVIKPS+DGP S
Subjt:  FEVDPDKARQALQELDQQLQSFS--KKRVTPPKNKVQGMKLPRDQ-MKGEMAEISGSFLANSAVVLFIFSIFYNVLFYTVIKPSIDGPLS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGGCTGTGGTTAATAATCAGCTCTCAGATGCTTTCCCTTCACTCTCTCTTCAATCGAAACCAGCGCCCGCCATTGTTAGCCACCAAGAAATGCTCTGACGTTTTGAA
GAGAATTAAAAGAGGTTACCCATTTCCTTCTTCTGCTTCTCGCTGTTGCATTGTGTGTTCAAGGGAGACTGATTCACAGCAATTTGAGGTTGACCCAGATAAGGCCAGGC
AGGCCCTTCAAGAGCTTGATCAGCAGCTTCAATCCTTCTCCAAAAAACGAGTCACTCCTCCCAAGAACAAAGTTCAAGGCATGAAACTTCCCAGAGATCAAATGAAAGGA
GAAATGGCAGAGATTTCAGGGTCCTTTTTAGCAAATTCTGCTGTTGTTCTCTTCATCTTCTCCATTTTCTACAATGTGCTGTTTTATACAGTCATAAAGCCTTCCATTGA
TGGTCCACTGTCAAGTTCAATCAGCTCTCAGAGACAATCTACTGAGCCACCAGTTTTGCAGCAGCTTCCACTTTCAATATCTCTCTTCTTATCCCCCTCTCTTCTTGGCT
AA
mRNA sequenceShow/hide mRNA sequence
ATGCGGCTGTGGTTAATAATCAGCTCTCAGATGCTTTCCCTTCACTCTCTCTTCAATCGAAACCAGCGCCCGCCATTGTTAGCCACCAAGAAATGCTCTGACGTTTTGAA
GAGAATTAAAAGAGGTTACCCATTTCCTTCTTCTGCTTCTCGCTGTTGCATTGTGTGTTCAAGGGAGACTGATTCACAGCAATTTGAGGTTGACCCAGATAAGGCCAGGC
AGGCCCTTCAAGAGCTTGATCAGCAGCTTCAATCCTTCTCCAAAAAACGAGTCACTCCTCCCAAGAACAAAGTTCAAGGCATGAAACTTCCCAGAGATCAAATGAAAGGA
GAAATGGCAGAGATTTCAGGGTCCTTTTTAGCAAATTCTGCTGTTGTTCTCTTCATCTTCTCCATTTTCTACAATGTGCTGTTTTATACAGTCATAAAGCCTTCCATTGA
TGGTCCACTGTCAAGTTCAATCAGCTCTCAGAGACAATCTACTGAGCCACCAGTTTTGCAGCAGCTTCCACTTTCAATATCTCTCTTCTTATCCCCCTCTCTTCTTGGCT
AA
Protein sequenceShow/hide protein sequence
MRLWLIISSQMLSLHSLFNRNQRPPLLATKKCSDVLKRIKRGYPFPSSASRCCIVCSRETDSQQFEVDPDKARQALQELDQQLQSFSKKRVTPPKNKVQGMKLPRDQMKG
EMAEISGSFLANSAVVLFIFSIFYNVLFYTVIKPSIDGPLSSSISSQRQSTEPPVLQQLPLSISLFLSPSLLG