; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0003164 (gene) of Snake gourd v1 genome

Gene IDTan0003164
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionglycine-rich protein 5-like
Genome locationLG01:8876632..8877076
RNA-Seq ExpressionTan0003164
SyntenyTan0003164
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577050.1 hypothetical protein SDJN03_24624, partial [Cucurbita argyrosperma subsp. sororia]3.0e-2168.35Show/hide
Query:  MKTYAIVLITIGSVIAAAMVLCCLCKYGGRKKKKTRTQTYIANAPRPTPPPQRMNHDLERGHDTQRSEIKNGGMTILAGAGAGLATAAVVTTFSNEGGGD
        M+TYAIVLIT G VIA+A++L C+C YGGRKKKK    TY ++A RPTP P R   DLE G      E KNGGMTILAGA AGLATAAVVT+ +N+GGG 
Subjt:  MKTYAIVLITIGSVIAAAMVLCCLCKYGGRKKKKTRTQTYIANAPRPTPPPQRMNHDLERGHDTQRSEIKNGGMTILAGAGAGLATAAVVTTFSNEGGGD

Query:  DGGDGG-GGDGDGGGGGCGGGGCGGGGCGGGGCGGGCGG
         GG GG  G GDGGGGGC GGGC GGGC GGGCGGGCGG
Subjt:  DGGDGG-GGDGDGGGGGCGGGGCGGGGCGGGGCGGGCGG

PIN16641.1 hypothetical protein CDL12_10707 [Handroanthus impetiginosus]5.8e-1757.14Show/hide
Query:  MKTYAIVLITIGSVIAAAMVLCCLCKYGGRKKKKTRTQTYIANAPRPTPPPQRMNHDLERGHDTQRSEIKNGGMTILAGAGAGLATAAVVTTFSNEGGGD
        MK YA+VLI +GS+ A  ++LCCLC   GRKKK+       A APRP+ PPQ +  D+E+G +++ S +KNGGM +L    A  ATA      SN GGG 
Subjt:  MKTYAIVLITIGSVIAAAMVLCCLCKYGGRKKKKTRTQTYIANAPRPTPPPQRMNHDLERGHDTQRSEIKNGGMTILAGAGAGLATAAVVTTFSNEGGGD

Query:  DGGDGGGGDGDGGGGGCGGGGCGGGGCGGGGCG--GGCGG
         GG GGGGDG GGGGG GGG CGGGGCGGGGCG  GGCGG
Subjt:  DGGDGGGGDGDGGGGGCGGGGCGGGGCGGGGCG--GGCGG

XP_022931328.1 glycine-rich protein 5-like [Cucurbita moschata]6.2e-1966.19Show/hide
Query:  MKTYAIVLITIGSVIAAAMVLCCLCKYGGRKKKKTRTQTYIANAPRPTPPPQRMNHDLERGHDTQRSEIKNGGMTILAGAGAGLATAAVVTTFSNE-GGG
        M+TYAIVLIT G VIA+A++L C+C YGGRKKKK    TY ++A RPTP P R   DLE G      E KNGGMTILAGA AGLATAAVVT+ +N+ GGG
Subjt:  MKTYAIVLITIGSVIAAAMVLCCLCKYGGRKKKKTRTQTYIANAPRPTPPPQRMNHDLERGHDTQRSEIKNGGMTILAGAGAGLATAAVVTTFSNE-GGG

Query:  DDGGDGGGGDGDGGGGGCGGGGCGGGGCGGGGCGGGCGG
          GG+ GGGDG GG GG G GG  GGGC GGGCGGGCGG
Subjt:  DDGGDGGGGDGDGGGGGCGGGGCGGGGCGGGGCGGGCGG

XP_022985127.1 glycine-rich protein 5-like [Cucurbita maxima]5.1e-2168.09Show/hide
Query:  MKTYAIVLITIGSVIAAAMVLCCLCKYGGRKKKKTRTQTYIANAPRPTPPPQRMNHDLERGHDTQRSEIKNGGMTILAGAGAGLATAAVVTTFSNEGGGD
        M+TYAIVLIT G VIA+A++L C+C YGGRKKKKT   TY ++A RPTP P R   DLE G      E KNGGMTILAGA AGLATAAVVT+ SN+GG  
Subjt:  MKTYAIVLITIGSVIAAAMVLCCLCKYGGRKKKKTRTQTYIANAPRPTPPPQRMNHDLERGHDTQRSEIKNGGMTILAGAGAGLATAAVVTTFSNEGGGD

Query:  DGGDGGGGDGDGGGGGCGGGGCG---GGGCGGGGCGGGCGG
         GG GGG  GD GGGG GGGGCG   GGGC GGGCGGGCGG
Subjt:  DGGDGGGGDGDGGGGGCGGGGCG---GGGCGGGGCGGGCGG

XP_023552868.1 glycine-rich protein DOT1-like [Cucurbita pepo subsp. pepo]1.5e-2067.39Show/hide
Query:  MKTYAIVLITIGSVIAAAMVLCCLCKYGGRKKKKTRTQTYIANAPRPTPPPQRMNHDLERGHDTQRSEIKNGGMTILAGAGAGLATAAVVTTFSNEGGGD
        M+TYAIVLIT G VIA+A++L C+C YGGRKKKK    TY ++A RPTP P R   DLE G      E KNGGMTILAGA AGLATAAVVT+ SN+GGG 
Subjt:  MKTYAIVLITIGSVIAAAMVLCCLCKYGGRKKKKTRTQTYIANAPRPTPPPQRMNHDLERGHDTQRSEIKNGGMTILAGAGAGLATAAVVTTFSNEGGGD

Query:  DGGDGGGGDGDGGGGGCGGGGCGGGGCGGGGCGGGCGG
         GG+ GGGDG GG GG G GG  GGGC GGGCGGGCGG
Subjt:  DGGDGGGGDGDGGGGGCGGGGCGGGGCGGGGCGGGCGG

TrEMBL top hitse value%identityAlignment
A0A0A0KVE1 Uncharacterized protein4.1e-1662.77Show/hide
Query:  MKTYAIVLITIGSVIAAAMVLCCLCKYGGRKKKKTRTQTYIANAPRPTPPPQRMNHDLERGHDTQRSEIKNGGMTILAGAGAGLATAAVVTTFSNEGGGD
        MKTYAIVLI  GSVI A M+L C+CK+G  +KKKT T     N P+ TP   + N D+ERG   + +   NGGMTIL GA AGLATAAVVTT S+ GGG 
Subjt:  MKTYAIVLITIGSVIAAAMVLCCLCKYGGRKKKKTRTQTYIANAPRPTPPPQRMNHDLERGHDTQRSEIKNGGMTILAGAGAGLATAAVVTTFSNEGGGD

Query:  DGGDGGGGDGDGGGGGCGGGGCGGGGCGGGGCGGGCG
         G  G GGDGDGGGGG  GGGC  GGC GGGCGGGCG
Subjt:  DGGDGGGGDGDGGGGGCGGGGCGGGGCGGGGCGGGCG

A0A1U8HEI6 loricrin-like1.6e-1255.24Show/hide
Query:  MKTYAIVLITIGSVIAA-AMVLCCLCKYGGRKKK-KTRTQTYIANAPRPTPP-PQRMNHDLERGHDTQRSE--IKNGGMTILAGAGAGLATAAVVTTFSN
        MK YAI LI  GSV AA  ++ CC CK G +KK     T+     +P P PP P ++N D+E+G    +S   I++GGM +L  A A  ATAAVVT+ + 
Subjt:  MKTYAIVLITIGSVIAA-AMVLCCLCKYGGRKKK-KTRTQTYIANAPRPTPP-PQRMNHDLERGHDTQRSE--IKNGGMTILAGAGAGLATAAVVTTFSN

Query:  EGGGDDGGDGGGGDGDGGGGGCGGGGCGGGGCGGGGCGGGCGG
         GGG  GG GGGGDG G  GGCGGGGCGGGGCGGGGC GGCGG
Subjt:  EGGGDDGGDGGGGDGDGGGGGCGGGGCGGGGCGGGGCGGGCGG

A0A2G9HGH5 Uncharacterized protein2.8e-1757.14Show/hide
Query:  MKTYAIVLITIGSVIAAAMVLCCLCKYGGRKKKKTRTQTYIANAPRPTPPPQRMNHDLERGHDTQRSEIKNGGMTILAGAGAGLATAAVVTTFSNEGGGD
        MK YA+VLI +GS+ A  ++LCCLC   GRKKK+       A APRP+ PPQ +  D+E+G +++ S +KNGGM +L    A  ATA      SN GGG 
Subjt:  MKTYAIVLITIGSVIAAAMVLCCLCKYGGRKKKKTRTQTYIANAPRPTPPPQRMNHDLERGHDTQRSEIKNGGMTILAGAGAGLATAAVVTTFSNEGGGD

Query:  DGGDGGGGDGDGGGGGCGGGGCGGGGCGGGGCG--GGCGG
         GG GGGGDG GGGGG GGG CGGGGCGGGGCG  GGCGG
Subjt:  DGGDGGGGDGDGGGGGCGGGGCGGGGCGGGGCG--GGCGG

A0A6J1EY84 glycine-rich protein 5-like3.0e-1966.19Show/hide
Query:  MKTYAIVLITIGSVIAAAMVLCCLCKYGGRKKKKTRTQTYIANAPRPTPPPQRMNHDLERGHDTQRSEIKNGGMTILAGAGAGLATAAVVTTFSNE-GGG
        M+TYAIVLIT G VIA+A++L C+C YGGRKKKK    TY ++A RPTP P R   DLE G      E KNGGMTILAGA AGLATAAVVT+ +N+ GGG
Subjt:  MKTYAIVLITIGSVIAAAMVLCCLCKYGGRKKKKTRTQTYIANAPRPTPPPQRMNHDLERGHDTQRSEIKNGGMTILAGAGAGLATAAVVTTFSNE-GGG

Query:  DDGGDGGGGDGDGGGGGCGGGGCGGGGCGGGGCGGGCGG
          GG+ GGGDG GG GG G GG  GGGC GGGCGGGCGG
Subjt:  DDGGDGGGGDGDGGGGGCGGGGCGGGGCGGGGCGGGCGG

A0A6J1J409 glycine-rich protein 5-like2.5e-2168.09Show/hide
Query:  MKTYAIVLITIGSVIAAAMVLCCLCKYGGRKKKKTRTQTYIANAPRPTPPPQRMNHDLERGHDTQRSEIKNGGMTILAGAGAGLATAAVVTTFSNEGGGD
        M+TYAIVLIT G VIA+A++L C+C YGGRKKKKT   TY ++A RPTP P R   DLE G      E KNGGMTILAGA AGLATAAVVT+ SN+GG  
Subjt:  MKTYAIVLITIGSVIAAAMVLCCLCKYGGRKKKKTRTQTYIANAPRPTPPPQRMNHDLERGHDTQRSEIKNGGMTILAGAGAGLATAAVVTTFSNEGGGD

Query:  DGGDGGGGDGDGGGGGCGGGGCG---GGGCGGGGCGGGCGG
         GG GGG  GD GGGG GGGGCG   GGGC GGGCGGGCGG
Subjt:  DGGDGGGGDGDGGGGGCGGGGCG---GGGCGGGGCGGGCGG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAACTTATGCCATTGTTCTCATAACTATCGGATCAGTGATAGCCGCTGCAATGGTTTTGTGTTGTCTTTGTAAATATGGGGGTCGTAAAAAGAAGAAAACAAGAAC
ACAAACATATATAGCTAATGCTCCAAGGCCAACGCCGCCGCCTCAACGGATGAACCATGATCTTGAACGCGGCCATGACACTCAAAGAAGTGAAATTAAGAACGGTGGGA
TGACGATTCTGGCCGGAGCCGGTGCTGGTTTAGCTACTGCAGCTGTGGTTACTACTTTTAGCAATGAAGGAGGAGGGGACGATGGAGGAGATGGTGGCGGAGGTGATGGT
GATGGCGGTGGTGGCGGCTGCGGTGGCGGTGGCTGCGGTGGTGGCGGGTGTGGTGGCGGCGGTTGTGGTGGCGGGTGTGGAGGTTGA
mRNA sequenceShow/hide mRNA sequence
TATTAGTGAAGTGATCCCAAAATTAGAAATGAAAACTTATGCCATTGTTCTCATAACTATCGGATCAGTGATAGCCGCTGCAATGGTTTTGTGTTGTCTTTGTAAATATG
GGGGTCGTAAAAAGAAGAAAACAAGAACACAAACATATATAGCTAATGCTCCAAGGCCAACGCCGCCGCCTCAACGGATGAACCATGATCTTGAACGCGGCCATGACACT
CAAAGAAGTGAAATTAAGAACGGTGGGATGACGATTCTGGCCGGAGCCGGTGCTGGTTTAGCTACTGCAGCTGTGGTTACTACTTTTAGCAATGAAGGAGGAGGGGACGA
TGGAGGAGATGGTGGCGGAGGTGATGGTGATGGCGGTGGTGGCGGCTGCGGTGGCGGTGGCTGCGGTGGTGGCGGGTGTGGTGGCGGCGGTTGTGGTGGCGGGTGTGGAG
GTTGA
Protein sequenceShow/hide protein sequence
MKTYAIVLITIGSVIAAAMVLCCLCKYGGRKKKKTRTQTYIANAPRPTPPPQRMNHDLERGHDTQRSEIKNGGMTILAGAGAGLATAAVVTTFSNEGGGDDGGDGGGGDG
DGGGGGCGGGGCGGGGCGGGGCGGGCGG