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Tan0003197 (gene) of Snake gourd v1 genome

Gene IDTan0003197
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionTPR_REGION domain-containing protein
Genome locationLG09:62123451..62124677
RNA-Seq ExpressionTan0003197
SyntenyTan0003197
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004144070.1 uncharacterized protein LOC101217749 [Cucumis sativus]9.7e-5784.17Show/hide
Query:  MRFWMCKIHCPSSFCLCQPSPHIYSTGSVSLNLENSPHLPSEDESVIGTSGSIVETFESKQECRD---DKQQESDCGIKSSLRKPSLRSGDLKEKHVKRV
        MRFWMCKIHCPSSFCLCQP+PHIYSTGS+ L+LENS HLPSE ESVIGTS SIVET ESKQECRD   DK QE++ GIKSSLRK SLRSG  KEKHVKRV
Subjt:  MRFWMCKIHCPSSFCLCQPSPHIYSTGSVSLNLENSPHLPSEDESVIGTSGSIVETFESKQECRD---DKQQESDCGIKSSLRKPSLRSGDLKEKHVKRV

Query:  QWMDFSGKELVETREFEPSEAEDSDYEDEDNRNCICTIL
        QWMDFSGKELVE REFE SEAEDSDYE EDNR+CICTIL
Subjt:  QWMDFSGKELVETREFEPSEAEDSDYEDEDNRNCICTIL

XP_016901000.1 PREDICTED: uncharacterized protein LOC103492420 [Cucumis melo]1.0e-5885.61Show/hide
Query:  MRFWMCKIHCPSSFCLCQPSPHIYSTGSVSLNLENSPHLPSEDESVIGTSGSIVETFESKQECR---DDKQQESDCGIKSSLRKPSLRSGDLKEKHVKRV
        MRFWMCKIHCPSSFCLCQP+PHIYSTGS+ L+LENS HLPSE ESVIGTSGSIVET ESKQECR   DDK QE++ GIKSSLRKPSLRSG  KEKHVKRV
Subjt:  MRFWMCKIHCPSSFCLCQPSPHIYSTGSVSLNLENSPHLPSEDESVIGTSGSIVETFESKQECR---DDKQQESDCGIKSSLRKPSLRSGDLKEKHVKRV

Query:  QWMDFSGKELVETREFEPSEAEDSDYEDEDNRNCICTIL
        QWMDFSGKELVE REFE SEAEDSDYE EDNR+CICTIL
Subjt:  QWMDFSGKELVETREFEPSEAEDSDYEDEDNRNCICTIL

XP_022147688.1 uncharacterized protein LOC111016556 [Momordica charantia]1.6e-5480.15Show/hide
Query:  MRFWMCKIHCPSSFCLCQPSPHIYSTGSVSLNLENSPHLPSEDESVIGTSGSIVETFESKQECRDDKQQESDCGIKSSLRKPSLRSGDLKEKHVKRVQWM
        MRFWMCKIHCPSSFCLCQPSP I +TGSV L LENSPHLPSE E+VIGTS SIV+TFE KQECRDDK+QE + GIKSSLRK SL+ G  + KH K+VQWM
Subjt:  MRFWMCKIHCPSSFCLCQPSPHIYSTGSVSLNLENSPHLPSEDESVIGTSGSIVETFESKQECRDDKQQESDCGIKSSLRKPSLRSGDLKEKHVKRVQWM

Query:  DFSGKELVETREFEPSEAEDSDYEDEDNRNCICTIL
        DFSGKELVE REFEPSE ED+DYEDEDNR+CICTIL
Subjt:  DFSGKELVETREFEPSEAEDSDYEDEDNRNCICTIL

XP_022932722.1 uncharacterized protein LOC111439183 [Cucurbita moschata]2.2e-4876.47Show/hide
Query:  MRFWMCKIHCPSSFCLCQPSPHIYSTGSVSLNLENSPHLPSEDESVIGTSGSIVETFESKQECRDDKQQESDCGIKSSLRKPSLRSGDLKEKHVKRVQWM
        MRFWMCKIHCPSS CLCQPSPHI+STGSVSL+L+NSPHLPS D  VI TSGS VET E K+    DK  ES+ G KSSLRKP+ RSG  KEKHVK VQWM
Subjt:  MRFWMCKIHCPSSFCLCQPSPHIYSTGSVSLNLENSPHLPSEDESVIGTSGSIVETFESKQECRDDKQQESDCGIKSSLRKPSLRSGDLKEKHVKRVQWM

Query:  DFSGKELVETREFEPSEAEDSDYEDEDNRNCICTIL
        DFSGKEL E REFE SE EDSDYEDEDN +CICTIL
Subjt:  DFSGKELVETREFEPSEAEDSDYEDEDNRNCICTIL

XP_038879679.1 uncharacterized protein LOC120071456 [Benincasa hispida]8.2e-5684.56Show/hide
Query:  MRFWMCKIHCPSSFCLCQPSPHIYSTGSVSLNLENSPHLPSEDESVIGTSGSIVETFESKQECRDDKQQESDCGIKSSLRKPSLRSGDLKEKHVKRVQWM
        MRFWMCKIHCPSSFCLCQPSPHIYSTGSV L+LENSPHLPSE +SVIG S SIVETFESKQECRDDK+      IKSSL+KPSLRS   KEKHVKRVQWM
Subjt:  MRFWMCKIHCPSSFCLCQPSPHIYSTGSVSLNLENSPHLPSEDESVIGTSGSIVETFESKQECRDDKQQESDCGIKSSLRKPSLRSGDLKEKHVKRVQWM

Query:  DFSGKELVETREFEPSEAEDSDYEDEDNRNCICTIL
        DFSGKELVE REFEPSEAEDSDYE E NR+CICTIL
Subjt:  DFSGKELVETREFEPSEAEDSDYEDEDNRNCICTIL

TrEMBL top hitse value%identityAlignment
A0A0A0M2C9 Uncharacterized protein4.7e-5784.17Show/hide
Query:  MRFWMCKIHCPSSFCLCQPSPHIYSTGSVSLNLENSPHLPSEDESVIGTSGSIVETFESKQECRD---DKQQESDCGIKSSLRKPSLRSGDLKEKHVKRV
        MRFWMCKIHCPSSFCLCQP+PHIYSTGS+ L+LENS HLPSE ESVIGTS SIVET ESKQECRD   DK QE++ GIKSSLRK SLRSG  KEKHVKRV
Subjt:  MRFWMCKIHCPSSFCLCQPSPHIYSTGSVSLNLENSPHLPSEDESVIGTSGSIVETFESKQECRD---DKQQESDCGIKSSLRKPSLRSGDLKEKHVKRV

Query:  QWMDFSGKELVETREFEPSEAEDSDYEDEDNRNCICTIL
        QWMDFSGKELVE REFE SEAEDSDYE EDNR+CICTIL
Subjt:  QWMDFSGKELVETREFEPSEAEDSDYEDEDNRNCICTIL

A0A1S4DZ54 uncharacterized protein LOC1034924205.0e-5985.61Show/hide
Query:  MRFWMCKIHCPSSFCLCQPSPHIYSTGSVSLNLENSPHLPSEDESVIGTSGSIVETFESKQECR---DDKQQESDCGIKSSLRKPSLRSGDLKEKHVKRV
        MRFWMCKIHCPSSFCLCQP+PHIYSTGS+ L+LENS HLPSE ESVIGTSGSIVET ESKQECR   DDK QE++ GIKSSLRKPSLRSG  KEKHVKRV
Subjt:  MRFWMCKIHCPSSFCLCQPSPHIYSTGSVSLNLENSPHLPSEDESVIGTSGSIVETFESKQECR---DDKQQESDCGIKSSLRKPSLRSGDLKEKHVKRV

Query:  QWMDFSGKELVETREFEPSEAEDSDYEDEDNRNCICTIL
        QWMDFSGKELVE REFE SEAEDSDYE EDNR+CICTIL
Subjt:  QWMDFSGKELVETREFEPSEAEDSDYEDEDNRNCICTIL

A0A6J1D1Z7 uncharacterized protein LOC1110165567.5e-5580.15Show/hide
Query:  MRFWMCKIHCPSSFCLCQPSPHIYSTGSVSLNLENSPHLPSEDESVIGTSGSIVETFESKQECRDDKQQESDCGIKSSLRKPSLRSGDLKEKHVKRVQWM
        MRFWMCKIHCPSSFCLCQPSP I +TGSV L LENSPHLPSE E+VIGTS SIV+TFE KQECRDDK+QE + GIKSSLRK SL+ G  + KH K+VQWM
Subjt:  MRFWMCKIHCPSSFCLCQPSPHIYSTGSVSLNLENSPHLPSEDESVIGTSGSIVETFESKQECRDDKQQESDCGIKSSLRKPSLRSGDLKEKHVKRVQWM

Query:  DFSGKELVETREFEPSEAEDSDYEDEDNRNCICTIL
        DFSGKELVE REFEPSE ED+DYEDEDNR+CICTIL
Subjt:  DFSGKELVETREFEPSEAEDSDYEDEDNRNCICTIL

A0A6J1EXK0 uncharacterized protein LOC1114391831.1e-4876.47Show/hide
Query:  MRFWMCKIHCPSSFCLCQPSPHIYSTGSVSLNLENSPHLPSEDESVIGTSGSIVETFESKQECRDDKQQESDCGIKSSLRKPSLRSGDLKEKHVKRVQWM
        MRFWMCKIHCPSS CLCQPSPHI+STGSVSL+L+NSPHLPS D  VI TSGS VET E K+    DK  ES+ G KSSLRKP+ RSG  KEKHVK VQWM
Subjt:  MRFWMCKIHCPSSFCLCQPSPHIYSTGSVSLNLENSPHLPSEDESVIGTSGSIVETFESKQECRDDKQQESDCGIKSSLRKPSLRSGDLKEKHVKRVQWM

Query:  DFSGKELVETREFEPSEAEDSDYEDEDNRNCICTIL
        DFSGKEL E REFE SE EDSDYEDEDN +CICTIL
Subjt:  DFSGKELVETREFEPSEAEDSDYEDEDNRNCICTIL

A0A6J1HTN7 uncharacterized protein LOC1114677181.8e-4876.47Show/hide
Query:  MRFWMCKIHCPSSFCLCQPSPHIYSTGSVSLNLENSPHLPSEDESVIGTSGSIVETFESKQECRDDKQQESDCGIKSSLRKPSLRSGDLKEKHVKRVQWM
        MRFWMCKIHCPSS CLCQPSPHI+STGSVSL+L+NSPHLPS D  VIGTSGS VET E K+    DK  ES+ G KSSLRK + RSG  KEKHVK VQWM
Subjt:  MRFWMCKIHCPSSFCLCQPSPHIYSTGSVSLNLENSPHLPSEDESVIGTSGSIVETFESKQECRDDKQQESDCGIKSSLRKPSLRSGDLKEKHVKRVQWM

Query:  DFSGKELVETREFEPSEAEDSDYEDEDNRNCICTIL
        DFSGKEL E REFE SE EDSDYEDEDN +CICTIL
Subjt:  DFSGKELVETREFEPSEAEDSDYEDEDNRNCICTIL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G22790.1 unknown protein7.8e-0429.5Show/hide
Query:  GSVSLNLENSPHLPSEDESVIGTSGSIVETFESKQECRDDKQQESDCG---------IKSSLRKPSLRSG----DLKEKHV--------------KRVQW
        G  S  LE    L  E         S  E+     E   D+  E+D G         ++SSL++PS+       D+KE                 ++VQW
Subjt:  GSVSLNLENSPHLPSEDESVIGTSGSIVETFESKQECRDDKQQESDCG---------IKSSLRKPSLRSG----DLKEKHV--------------KRVQW

Query:  MDFSGKELVETREFEPSE--AEDSDYEDEDNRNCICTIL
         D  G EL + REFEPSE    D ++E    R C C I+
Subjt:  MDFSGKELVETREFEPSE--AEDSDYEDEDNRNCICTIL

AT1G34010.1 unknown protein4.1e-0536Show/hide
Query:  IKSSLRKPSL-----------RSGDLKEKHVKRVQWMDFSGKELVETREFEPSEAEDS--DYEDEDNRNCICTIL
        +KSSL+K S            R G +     ++VQW D  G E+ E REFEPSE ++S  ++     ++C+CTI+
Subjt:  IKSSLRKPSL-----------RSGDLKEKHVKRVQWMDFSGKELVETREFEPSEAEDS--DYEDEDNRNCICTIL

AT1G55475.1 unknown protein4.7e-0946.77Show/hide
Query:  IKSSLRKPSLRSGDLKEKHVKRVQWMDFSGKELVETREFEPSEAEDSDYEDEDNRNCICTIL
        +KSSLRK    S + +++  K+VQW+D  GKEL E REFEPS+ +D D   +  + C+C IL
Subjt:  IKSSLRKPSLRSGDLKEKHVKRVQWMDFSGKELVETREFEPSEAEDSDYEDEDNRNCICTIL

AT2G33390.1 unknown protein5.4e-0534.38Show/hide
Query:  EDESVIGTSGSIVETFESKQECRDDKQQESDCGIKSSLRKPSL-RSGDLKEKHVKRVQWMDFSGKELVETREFEPSEAEDSDYEDEDNRNCICTIL
        E+++++  + S +E      +  ++++ ES C +    RK  + RS D   K  + VQW D  G  L E   +EPSE   SD ED+D+ +CICTI+
Subjt:  EDESVIGTSGSIVETFESKQECRDDKQQESDCGIKSSLRKPSL-RSGDLKEKHVKRVQWMDFSGKELVETREFEPSEAEDSDYEDEDNRNCICTIL

AT3G13480.1 unknown protein3.5e-2036.42Show/hide
Query:  MRFWMCKIHCPSSFCLCQPSPHIYSTGSVSL---------------------NLENSPHLPSEDESVIGTSGSIVETFESKQECRDDKQQESDC-----G
        MR  +CKI CPS  C C+PSPHIY++GS+ L                     N ++  H+  E+  V    G + E    +    + K++E +       
Subjt:  MRFWMCKIHCPSSFCLCQPSPHIYSTGSVSL---------------------NLENSPHLPSEDESVIGTSGSIVETFESKQECRDDKQQESDC-----G

Query:  IKSSLRKPSLRSGDLKEKHVKRVQWMDFSGKELVETREFEPSEAEDSDYEDEDNRNCICTIL
        +KSSL+K  L S D   K  K+VQW+D  GKEL E REFE SE ED  Y+ +  ++C+C IL
Subjt:  IKSSLRKPSLRSGDLKEKHVKRVQWMDFSGKELVETREFEPSEAEDSDYEDEDNRNCICTIL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGTTTTGGATGTGTAAGATTCACTGTCCTTCATCCTTTTGCCTTTGCCAACCTTCCCCTCATATATATTCCACTGGATCAGTATCATTAAATTTGGAAAACTCACC
ACATTTGCCTTCAGAAGATGAGTCAGTCATTGGAACTTCTGGTTCAATTGTTGAGACCTTTGAATCCAAGCAAGAGTGCAGAGATGACAAACAGCAGGAGAGTGATTGTG
GAATCAAGAGTAGTCTGAGGAAGCCAAGTTTGCGGTCAGGCGATTTGAAGGAGAAGCATGTGAAAAGAGTACAATGGATGGATTTTTCAGGCAAAGAACTTGTTGAGACC
AGGGAATTTGAACCTAGTGAAGCTGAAGATTCTGATTATGAAGATGAGGATAACAGAAACTGCATCTGTACTATTTTATGA
mRNA sequenceShow/hide mRNA sequence
ATGAGGTTTTGGATGTGTAAGATTCACTGTCCTTCATCCTTTTGCCTTTGCCAACCTTCCCCTCATATATATTCCACTGGATCAGTATCATTAAATTTGGAAAACTCACC
ACATTTGCCTTCAGAAGATGAGTCAGTCATTGGAACTTCTGGTTCAATTGTTGAGACCTTTGAATCCAAGCAAGAGTGCAGAGATGACAAACAGCAGGAGAGTGATTGTG
GAATCAAGAGTAGTCTGAGGAAGCCAAGTTTGCGGTCAGGCGATTTGAAGGAGAAGCATGTGAAAAGAGTACAATGGATGGATTTTTCAGGCAAAGAACTTGTTGAGACC
AGGGAATTTGAACCTAGTGAAGCTGAAGATTCTGATTATGAAGATGAGGATAACAGAAACTGCATCTGTACTATTTTATGA
Protein sequenceShow/hide protein sequence
MRFWMCKIHCPSSFCLCQPSPHIYSTGSVSLNLENSPHLPSEDESVIGTSGSIVETFESKQECRDDKQQESDCGIKSSLRKPSLRSGDLKEKHVKRVQWMDFSGKELVET
REFEPSEAEDSDYEDEDNRNCICTIL