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Tan0003206 (gene) of Snake gourd v1 genome

Gene IDTan0003206
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionReverse transcriptase
Genome locationLG06:38640229..38644665
RNA-Seq ExpressionTan0003206
SyntenyTan0003206
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0062407.1 uncharacterized protein E6C27_scaffold154G002090 [Cucumis melo var. makuwa]2.9e-0667.31Show/hide
Query:  MTEILSPRLYGTVCTQVVIELPVPDILPLSTKSSTSLIFCTWVVLYSKSICV
        MTEILS RLYGTVCTQV IELP+PD LP S +SS S  F TW+ LY +S+ V
Subjt:  MTEILSPRLYGTVCTQVVIELPVPDILPLSTKSSTSLIFCTWVVLYSKSICV

TrEMBL top hitse value%identityAlignment
A0A5A7V638 Uncharacterized protein1.4e-0667.31Show/hide
Query:  MTEILSPRLYGTVCTQVVIELPVPDILPLSTKSSTSLIFCTWVVLYSKSICV
        MTEILS RLYGTVCTQV IELP+PD LP S +SS S  F TW+ LY +S+ V
Subjt:  MTEILSPRLYGTVCTQVVIELPVPDILPLSTKSSTSLIFCTWVVLYSKSICV

A0A5A7VMG9 Reverse transcriptase5.0e-0450.72Show/hide
Query:  MTEILSPRLYGTVCTQVV-----------------IELPVPDILPLSTKSSTSLIFCTWVVLYSKSICV
        MTEILSPRLYGTVCTQV+                 IELPVPD LP S +SS S    TW+ LY + + V
Subjt:  MTEILSPRLYGTVCTQVV-----------------IELPVPDILPLSTKSSTSLIFCTWVVLYSKSICV

A0A5D3DX39 Reverse transcriptase5.0e-0450.72Show/hide
Query:  MTEILSPRLYGTVCTQVV-----------------IELPVPDILPLSTKSSTSLIFCTWVVLYSKSICV
        MTEILSPRLYGTVCTQV+                 IELPVPD LP S +SS S    TW+ LY + + V
Subjt:  MTEILSPRLYGTVCTQVV-----------------IELPVPDILPLSTKSSTSLIFCTWVVLYSKSICV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTGAGATATTGAGCCCGAGGCTATATGGTACCGTGTGCACACAGGTAGTGATCGAGCTCCCAGTGCCTGACATCCTGCCATTGTCTACTAAAAGCTCCACGAGCTT
GATATTTTGTACGTGGGTGGTGTTGTATAGCAAGTCCATATGTGTTGTATGGCCTGTAGCCGACTCAACAAGTCTACCTTCTCAGGGACGGAACCTCGTAGGTAGCGGGA
ACTTAACTGTGCAAGATGGAATTCACTCATTCCTATACTAA
mRNA sequenceShow/hide mRNA sequence
ATGACTGAGATATTGAGCCCGAGGCTATATGGTACCGTGTGCACACAGGTAGTGATCGAGCTCCCAGTGCCTGACATCCTGCCATTGTCTACTAAAAGCTCCACGAGCTT
GATATTTTGTACGTGGGTGGTGTTGTATAGCAAGTCCATATGTGTTGTATGGCCTGTAGCCGACTCAACAAGTCTACCTTCTCAGGGACGGAACCTCGTAGGTAGCGGGA
ACTTAACTGTGCAAGATGGAATTCACTCATTCCTATACTAA
Protein sequenceShow/hide protein sequence
MTEILSPRLYGTVCTQVVIELPVPDILPLSTKSSTSLIFCTWVVLYSKSICVVWPVADSTSLPSQGRNLVGSGNLTVQDGIHSFLY