; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0003221 (gene) of Snake gourd v1 genome

Gene IDTan0003221
OrganismTrichosanthes anguina (Snake gourd v1)
Description40S ribosomal protein SA
Genome locationLG10:48523862..48526333
RNA-Seq ExpressionTan0003221
SyntenyTan0003221
Gene Ontology termsGO:0000028 - ribosomal small subunit assembly (biological process)
GO:0002181 - cytoplasmic translation (biological process)
GO:0022627 - cytosolic small ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001865 - Ribosomal protein S2
IPR005707 - Ribosomal protein S2, eukaryotic/archaeal
IPR018130 - Ribosomal protein S2, conserved site
IPR023591 - Ribosomal protein S2, flavodoxin-like domain superfamily
IPR027498 - Ribosomal protein S2, eukaryotic


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607580.1 40S ribosomal protein SA, partial [Cucurbita argyrosperma subsp. sororia]7.3e-16192.31Show/hide
Query:  MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQYTGAH
        MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQYTGAH
Subjt:  MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQYTGAH

Query:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV
        AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV
Subjt:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV

Query:  MVDLFFYREPEEAKEKEEEEALPPPDFGIADYGAAPLVASDQWTSQIPDAQWGAADVVVPAAAA-----PPASNDWAQEPVALASE-WDAAAAPPPPAPA
        MVDLFFYREPEEAKEKEEEEALPPPDFGIADYGAAPLVASDQW++QIPDAQWGAADVVVPAAAA     PP+S +W  EP ALA++ WDAA APP  APA
Subjt:  MVDLFFYREPEEAKEKEEEEALPPPDFGIADYGAAPLVASDQWTSQIPDAQWGAADVVVPAAAA-----PPASNDWAQEPVALASE-WDAAAAPPPPAPA

Query:  VDGAAPSSTGEW
        VDGAAP S G W
Subjt:  VDGAAPSSTGEW

XP_022932088.1 40S ribosomal protein SA-like [Cucurbita moschata]5.6e-16192.6Show/hide
Query:  MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQYTGAH
        MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQYTGAH
Subjt:  MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQYTGAH

Query:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV
        AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV
Subjt:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV

Query:  MVDLFFYREPEEAKEKEEEEALPPPDFGIADYGAAPLVASDQWTSQIPDAQWGAADVVVPAAAA----PPASNDWAQEPVALASE-WDAAAAPPPPAPAV
        MVDLFFYREPEEAKEKEEEEALPPPDFGIADYGAAPLVASDQW++QIPDAQWGAADVVVPAAAA    PP+S +W  EP ALA++ WDAA APP  APAV
Subjt:  MVDLFFYREPEEAKEKEEEEALPPPDFGIADYGAAPLVASDQWTSQIPDAQWGAADVVVPAAAA----PPASNDWAQEPVALASE-WDAAAAPPPPAPAV

Query:  DGAAPSSTGEW
        DGAAP S G W
Subjt:  DGAAPSSTGEW

XP_022972886.1 40S ribosomal protein SA-like [Cucurbita maxima]5.2e-15991.67Show/hide
Query:  MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQYTGAH
        MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQYTGAH
Subjt:  MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQYTGAH

Query:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV
        AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV
Subjt:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV

Query:  MVDLFFYREPEEAKEKEEEEALPPPDFGIADYGAAPLVASDQWTSQIPDAQWGAADVVVPAAAA----PPASNDWAQEPVALASE-WDAAAAPPPPAPAV
        MVDLFFYREPEEAKEKEEEEALPPPDFGIADYGAAPLVASDQW++QIPDAQWGAADVVVPAA A    PP+S +W  EP ALA++ WDAA +PP  APAV
Subjt:  MVDLFFYREPEEAKEKEEEEALPPPDFGIADYGAAPLVASDQWTSQIPDAQWGAADVVVPAAAA----PPASNDWAQEPVALASE-WDAAAAPPPPAPAV

Query:  DGAA-PSSTGEW
        DGAA PS+ G W
Subjt:  DGAA-PSSTGEW

XP_023525392.1 40S ribosomal protein SA-like [Cucurbita pepo subsp. pepo]1.6e-16091.43Show/hide
Query:  MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQYTGAH
        MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQYTGAH
Subjt:  MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQYTGAH

Query:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV
        AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV
Subjt:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV

Query:  MVDLFFYREPEEAKEKEEEEALPPPDFGIADYGAAPLVASDQWTSQIPDAQWGAADVVVPAAAA--------PPASNDWAQEPVALASE-WDAAAAPPPP
        MVDLFFYREPEEAKEKEEEEALPPPDFGIADYGAAPLVASDQW++QIPDAQWGAADVVVPAAAA        PP+S +W  EP ALA++ WDAA APP  
Subjt:  MVDLFFYREPEEAKEKEEEEALPPPDFGIADYGAAPLVASDQWTSQIPDAQWGAADVVVPAAAA--------PPASNDWAQEPVALASE-WDAAAAPPPP

Query:  APAVDGAAPSSTGEW
        APAVDGAAP S G W
Subjt:  APAVDGAAPSSTGEW

XP_038886558.1 40S ribosomal protein SA-like [Benincasa hispida]3.5e-15590.1Show/hide
Query:  MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQYTGAH
        MATGAAPPRQL+QKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQ+TGAH
Subjt:  MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQYTGAH

Query:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV
        AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV
Subjt:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV

Query:  MVDLFFYREPEEAKEKEEEEALPPPDFGIADYGAAPLVASDQWTSQIPDAQWGAADVVVPAAAAPPASN-DWAQEPVALASE-WDAAAAPPPPAPAVDGA
        MVDLFFYREPEEAKE EEEEALPPPDFGIADYGAAPLV +DQWT+QIPDAQWGA D  VPAAA PPASN +WAQEPVALA++ WDAA    PP PA DGA
Subjt:  MVDLFFYREPEEAKEKEEEEALPPPDFGIADYGAAPLVASDQWTSQIPDAQWGAADVVVPAAAAPPASN-DWAQEPVALASE-WDAAAAPPPPAPAVDGA

Query:  A-----PSSTGEW
              P S+  W
Subjt:  A-----PSSTGEW

TrEMBL top hitse value%identityAlignment
A0A1S3CJX7 40S ribosomal protein SA2.4e-15491.78Show/hide
Query:  MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQYTGAH
        MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQ+TGAH
Subjt:  MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQYTGAH

Query:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV
        AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV
Subjt:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV

Query:  MVDLFFYREPEEAKEKEEEEALPPPDFGIADYGAAPLVASDQWTSQIPDAQWGAADVVVPAAAAPPASN-DWAQEPVALASE-WDAAAAPPPPAPAVDGA
        MVDLFFYREPEEAKE EEEEALPP DFGIADY AAPL ASDQWTSQIPDAQWGAAD + P AA  PAS  +WA EPVAL ++ WDAAA PPPPA + DG 
Subjt:  MVDLFFYREPEEAKEKEEEEALPPPDFGIADYGAAPLVASDQWTSQIPDAQWGAADVVVPAAAAPPASN-DWAQEPVALASE-WDAAAAPPPPAPAVDGA

Query:  APSS
        AP+S
Subjt:  APSS

A0A5D3DUK0 40S ribosomal protein SA2.4e-15491.78Show/hide
Query:  MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQYTGAH
        MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQ+TGAH
Subjt:  MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQYTGAH

Query:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV
        AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV
Subjt:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV

Query:  MVDLFFYREPEEAKEKEEEEALPPPDFGIADYGAAPLVASDQWTSQIPDAQWGAADVVVPAAAAPPASN-DWAQEPVALASE-WDAAAAPPPPAPAVDGA
        MVDLFFYREPEEAKE EEEEALPP DFGIADY AAPL ASDQWTSQIPDAQWGAAD + P AA  PAS  +WA EPVAL ++ WDAAA PPPPA + DG 
Subjt:  MVDLFFYREPEEAKEKEEEEALPPPDFGIADYGAAPLVASDQWTSQIPDAQWGAADVVVPAAAAPPASN-DWAQEPVALASE-WDAAAAPPPPAPAVDGA

Query:  APSS
        AP+S
Subjt:  APSS

A0A6J1F0N2 40S ribosomal protein SA2.7e-16192.6Show/hide
Query:  MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQYTGAH
        MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQYTGAH
Subjt:  MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQYTGAH

Query:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV
        AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV
Subjt:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV

Query:  MVDLFFYREPEEAKEKEEEEALPPPDFGIADYGAAPLVASDQWTSQIPDAQWGAADVVVPAAAA----PPASNDWAQEPVALASE-WDAAAAPPPPAPAV
        MVDLFFYREPEEAKEKEEEEALPPPDFGIADYGAAPLVASDQW++QIPDAQWGAADVVVPAAAA    PP+S +W  EP ALA++ WDAA APP  APAV
Subjt:  MVDLFFYREPEEAKEKEEEEALPPPDFGIADYGAAPLVASDQWTSQIPDAQWGAADVVVPAAAA----PPASNDWAQEPVALASE-WDAAAAPPPPAPAV

Query:  DGAAPSSTGEW
        DGAAP S G W
Subjt:  DGAAPSSTGEW

A0A6J1I769 40S ribosomal protein SA2.5e-15991.67Show/hide
Query:  MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQYTGAH
        MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQYTGAH
Subjt:  MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQYTGAH

Query:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV
        AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV
Subjt:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV

Query:  MVDLFFYREPEEAKEKEEEEALPPPDFGIADYGAAPLVASDQWTSQIPDAQWGAADVVVPAAAA----PPASNDWAQEPVALASE-WDAAAAPPPPAPAV
        MVDLFFYREPEEAKEKEEEEALPPPDFGIADYGAAPLVASDQW++QIPDAQWGAADVVVPAA A    PP+S +W  EP ALA++ WDAA +PP  APAV
Subjt:  MVDLFFYREPEEAKEKEEEEALPPPDFGIADYGAAPLVASDQWTSQIPDAQWGAADVVVPAAAA----PPASNDWAQEPVALASE-WDAAAAPPPPAPAV

Query:  DGAA-PSSTGEW
        DGAA PS+ G W
Subjt:  DGAA-PSSTGEW

A0A6J1I7P9 40S ribosomal protein SA4.2e-15492.13Show/hide
Query:  MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQYTGAH
        MATGAAP RQLSQKEADIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKL +AARVIV IENPQDIIVQSARPYGQRAVLKFAQYTG H
Subjt:  MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQYTGAH

Query:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV
        AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV
Subjt:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV

Query:  MVDLFFYREPEEAKEKEEEEALPPPDFGIADYGAAPLVASDQWTSQIPDAQWGAADVVVPAAAAPPASN-DWAQEPVAL-ASEWDAAAAPPPPA-PAVDG
        MVDLFFYREPEEAKEKEEEEALPPPDFGIADYGAAPLVASDQW +QI DAQWGAAD VVPA AAP AS+ +WA EPV L A+EW+AA APPPPA PA DG
Subjt:  MVDLFFYREPEEAKEKEEEEALPPPDFGIADYGAAPLVASDQWTSQIPDAQWGAADVVVPAAAAPPASN-DWAQEPVAL-ASEWDAAAAPPPPA-PAVDG

Query:  AAPSS
        AAPSS
Subjt:  AAPSS

SwissProt top hitse value%identityAlignment
A5BUU4 40S ribosomal protein SA2.7e-12677.17Show/hide
Query:  AAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAG
        A P R LSQKE DIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIV IENP+DIIVQSARPYGQRAVLKFAQYTGAHAIAG
Subjt:  AAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAG

Query:  RHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVMVDL
        RHTPGTFTNQLQTSF+EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMR TI  GHKWDVMVDL
Subjt:  RHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVMVDL

Query:  FFYREPEEAKEKEEEEALPPPDFGIADYGAAPL--VASDQWTSQIPDA-QWGAADVVVPAAAAPPASN--DWAQEPVAL---ASEWDAAAAPP--PPAPA
        FFYREPEE KE+E +E +  PD+GI DY A  L  +    W + I DA QWGA    V    A P SN  D A  P A+      WDAAAAPP   P P 
Subjt:  FFYREPEEAKEKEEEEALPPPDFGIADYGAAPL--VASDQWTSQIPDA-QWGAADVVVPAAAAPPASN--DWAQEPVAL---ASEWDAAAAPP--PPAPA

Query:  VDGAAPSSTGE
        V+G  P +  E
Subjt:  VDGAAPSSTGE

O22518 40S ribosomal protein SA7.2e-12777.96Show/hide
Query:  AAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAG
        AAPPRQLSQKEADIQMMLAA+VHLGTKNCDFQMERY+FKRRNDGIYIINLGKTWEKLQLAARVIV IENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAG
Subjt:  AAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAG

Query:  RHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVMVDL
        RHTPGTFTNQLQTSF+EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIR G KWDVMVDL
Subjt:  RHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVMVDL

Query:  FFYREPEEAKEKEEEEALPPPDFGIADYGAAPLVASDQWTSQIPDAQWGAADVVVPAAAAPPASNDW---AQEPVALASEWDAAAAPPP----PAPAVDG
        FFYREPEEAK++EEEEA P  D+ I D+ A  + A  QW   I D  W  +D V     A P  N W   A+ P A   +W  A  PP     P   +D 
Subjt:  FFYREPEEAKEKEEEEALPPPDFGIADYGAAPLVASDQWTSQIPDAQWGAADVVVPAAAAPPASNDW---AQEPVALASEWDAAAAPPP----PAPAVDG

Query:  AAPS
          PS
Subjt:  AAPS

O65751 40S ribosomal protein SA4.8e-12375.33Show/hide
Query:  MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQYTGAH
        MAT  AP RQL+QKEADIQMMLAA+VHLGTKNC+FQMERY+FKRRNDGIYIINLGKTW+KL LAAR+IV IEN QDIIVQSARPYGQRAVLKFAQYTGAH
Subjt:  MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQYTGAH

Query:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV
        AIAGRHTPGTFTNQLQTSF+EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPM YVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIR G KWDV
Subjt:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV

Query:  MVDLFFYREPEEAKEKEEEEALPPPDFGIADYGAAPLVASDQWTSQIPDAQWGAADVVVPAAAAPPASNDWAQEPVALASEWDAAAAPPPPAPAVDGAAP
        MVDLFFYREPEEAK+ EE+E +  PD+ IAD+  + + +  QW + I D  W   D V     A PA N WA  P A+A +W  A  PP   P     + 
Subjt:  MVDLFFYREPEEAKEKEEEEALPPPDFGIADYGAAPLVASDQWTSQIPDAQWGAADVVVPAAAAPPASNDWAQEPVALASEWDAAAAPPPPAPAVDGAAP

Query:  SSTG
         +TG
Subjt:  SSTG

O80377 40S ribosomal protein SA5.9e-12979.93Show/hide
Query:  MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQYTGAH
        MA+GA   R+LS  EADIQMM AAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL LAARVIV IENPQDIIVQSARPYGQRAVLKFAQYTGAH
Subjt:  MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQYTGAH

Query:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV
        AIAGRHTPGTFTNQLQTSF+EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRG I  GHKW+V
Subjt:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV

Query:  MVDLFFYREPEEAKEKEEEEALPPPDFGIADYGAAPLVASDQWTSQIPDAQWGAADVVVPAAAAPPASNDWAQEPVALASEWDAAAAPPPPAPAVDGAAP
        MVDLFFYREPEE K++EEE+ LP  D+ +ADY AAP+  +DQW + IPDAQWG  DVV PA +A PA   W          WDAAAAPP P  AV    P
Subjt:  MVDLFFYREPEEAKEKEEEEALPPPDFGIADYGAAPLVASDQWTSQIPDAQWGAADVVVPAAAAPPASNDWAQEPVALASEWDAAAAPPPPAPAVDGAAP

Query:  SSTG
        + TG
Subjt:  SSTG

Q08682 40S ribosomal protein Sa-13.4e-12176.01Show/hide
Query:  MAT-GAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQYTGA
        MAT G+A   QLSQKEAD++MM AAEVHLGTKNC++QMERYVFKRRNDGIYI NLGKTWEKLQ+AARVIV IENPQDIIVQSARPYGQRAVLKFAQYTGA
Subjt:  MAT-GAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQYTGA

Query:  HAIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWD
        +AIAGRHTPGTFTNQ+QTSF+EPRLLILTDPRTDHQPIKE ALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI AG KWD
Subjt:  HAIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWD

Query:  VMVDLFFYREPEEAKEKEEEEALPPPDFGIADYGAAPLVASDQW-TSQIPDAQWGAADVVVPAAAAPPASNDWAQEPVALASEWDAAAAPPPPAPA
        VMVDLFFYREPEE K ++E+EA P  ++G        +V  DQW T+QIPDA W   +   P +AAP A++ W+    A A     AAAPP  APA
Subjt:  VMVDLFFYREPEEAKEKEEEEALPPPDFGIADYGAAPLVASDQW-TSQIPDAQWGAADVVVPAAAAPPASNDWAQEPVALASEWDAAAAPPPPAPA

Arabidopsis top hitse value%identityAlignment
AT1G72370.1 40s ribosomal protein SA2.4e-12276.01Show/hide
Query:  MAT-GAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQYTGA
        MAT G+A   QLSQKEAD++MM AAEVHLGTKNC++QMERYVFKRRNDGIYI NLGKTWEKLQ+AARVIV IENPQDIIVQSARPYGQRAVLKFAQYTGA
Subjt:  MAT-GAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQYTGA

Query:  HAIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWD
        +AIAGRHTPGTFTNQ+QTSF+EPRLLILTDPRTDHQPIKE ALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI AG KWD
Subjt:  HAIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWD

Query:  VMVDLFFYREPEEAKEKEEEEALPPPDFGIADYGAAPLVASDQW-TSQIPDAQWGAADVVVPAAAAPPASNDWAQEPVALASEWDAAAAPPPPAPA
        VMVDLFFYREPEE K ++E+EA P  ++G        +V  DQW T+QIPDA W   +   P +AAP A++ W+    A A     AAAPP  APA
Subjt:  VMVDLFFYREPEEAKEKEEEEALPPPDFGIADYGAAPLVASDQW-TSQIPDAQWGAADVVVPAAAAPPASNDWAQEPVALASEWDAAAAPPPPAPA

AT1G72370.2 40s ribosomal protein SA3.5e-12175.68Show/hide
Query:  MAT-GAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQYTGA
        MAT G+A   QLSQKEAD++MM AAEVHLGTKNC++QMERYVFKRRNDGIYI NLGKTWEKLQ+AARVIV IENPQDIIVQSARPYGQRAVLKFAQYTGA
Subjt:  MAT-GAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQYTGA

Query:  HAIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWD
        +AIAGRHTPGTFTNQ+QTSF+EPRLLILTDPRTDHQPIKE ALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI AG KWD
Subjt:  HAIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWD

Query:  VMVDLFFYREPEEAKEKEEEEALPPPDFGIADYGAAPLVASDQW-TSQIPDAQWGAADVVVPAAAAPPASNDWAQEPVALASEWDAAAAPPPPAPA
        VMVDLFFYREPEE K ++E+EA P  ++G        +V  DQW T+QIPDA W   +   P +AAP A++ W+    +    W+ AAAPP  APA
Subjt:  VMVDLFFYREPEEAKEKEEEEALPPPDFGIADYGAAPLVASDQW-TSQIPDAQWGAADVVVPAAAAPPASNDWAQEPVALASEWDAAAAPPPPAPA

AT3G04770.1 40s ribosomal protein SA B1.4e-10187.44Show/hide
Query:  AAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAG
        A   RQ+S+KEADIQMML+A+VHLGTKNC++QMERYVFKRR+DGIYIINLGKTW+KLQ+AARVIV IENP+DIIVQSARPYGQRAVLKFAQYTG +AIAG
Subjt:  AAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAG

Query:  RHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVMVD
        RHTPGTFTNQ+QTSF+EPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPM +VDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI A  KWDVMV+
Subjt:  RHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVMVD

AT3G04770.2 40s ribosomal protein SA B4.0e-11774.39Show/hide
Query:  AAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAG
        A   RQ+S+KEADIQMML+A+VHLGTKNC++QMERYVFKRR+DGIYIINLGKTW+KLQ+AARVIV IENP+DIIVQSARPYGQRAVLKFAQYTG +AIAG
Subjt:  AAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAG

Query:  RHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVMVDL
        RHTPGTFTNQ+QTSF+EPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPM +VDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI A  KWDVMVDL
Subjt:  RHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVMVDL

Query:  FFYREPEEAKEKEEEEALPPPDFGIADYGAAPLVASDQW-TSQIPDAQWGAADVVVPAAAAPPASNDWAQEPVALASEWDAAAAP
        FFYREPEEAK++ +EEA    D+G        +V  DQW T+QI DA W + +V  P +AAP          V +A+ W+AA+ P
Subjt:  FFYREPEEAKEKEEEEALPPPDFGIADYGAAPLVASDQW-TSQIPDAQWGAADVVVPAAAAPPASNDWAQEPVALASEWDAAAAP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACTGGAGCTGCACCGCCGCGTCAACTGTCACAGAAGGAGGCCGACATTCAGATGATGTTGGCTGCTGAGGTTCATCTTGGCACCAAAAATTGCGATTTCCAAAT
GGAACGTTACGTTTTCAAGCGCCGTAATGATGGAATCTACATCATTAACCTTGGTAAAACATGGGAGAAACTTCAGCTGGCTGCTAGAGTTATTGTGGGTATCGAGAATC
CTCAAGATATCATTGTTCAGTCTGCTAGACCTTATGGTCAGAGGGCTGTTTTGAAGTTTGCTCAATACACTGGTGCTCATGCAATTGCTGGAAGGCACACACCCGGAACA
TTCACCAACCAGCTTCAGACCTCATTCAATGAGCCACGTCTTCTTATACTTACTGATCCTAGGACTGATCATCAGCCCATTAAGGAAGCTGCTCTTGGGAACATTCCTAC
AATAGCCTTTTGTGACACTGATTCCCCAATGCGGTATGTTGATATTGGAATCCCAGCTAACAACAAGGGAAAACATAGCATTGGGTGTCTGTTTTGGCTTTTGGCAAGGA
TGGTACTACAAATGCGTGGAACTATTCGTGCTGGGCACAAATGGGATGTGATGGTTGATTTGTTTTTCTATCGCGAGCCTGAGGAAGCTAAGGAGAAAGAAGAGGAAGAG
GCTCTTCCACCCCCAGATTTTGGCATTGCTGACTATGGTGCTGCTCCACTTGTTGCATCAGATCAATGGACTTCACAAATTCCTGATGCTCAGTGGGGTGCTGCAGATGT
GGTTGTTCCAGCCGCTGCTGCTCCACCCGCTTCCAATGATTGGGCCCAAGAGCCAGTTGCTTTGGCATCAGAATGGGATGCTGCAGCAGCACCTCCACCACCGGCACCTG
CTGTCGACGGTGCAGCACCTTCCTCTACCGGTGAATGGTAA
mRNA sequenceShow/hide mRNA sequence
GACCCATTTGCAGTCGCCGAAGAGCCCTCATCTCCCTACCTTCAGTTCGCCGATTATCAGATTCAGCCATGGCGACTGGAGCTGCACCGCCGCGTCAACTGTCACAGAAG
GAGGCCGACATTCAGATGATGTTGGCTGCTGAGGTTCATCTTGGCACCAAAAATTGCGATTTCCAAATGGAACGTTACGTTTTCAAGCGCCGTAATGATGGAATCTACAT
CATTAACCTTGGTAAAACATGGGAGAAACTTCAGCTGGCTGCTAGAGTTATTGTGGGTATCGAGAATCCTCAAGATATCATTGTTCAGTCTGCTAGACCTTATGGTCAGA
GGGCTGTTTTGAAGTTTGCTCAATACACTGGTGCTCATGCAATTGCTGGAAGGCACACACCCGGAACATTCACCAACCAGCTTCAGACCTCATTCAATGAGCCACGTCTT
CTTATACTTACTGATCCTAGGACTGATCATCAGCCCATTAAGGAAGCTGCTCTTGGGAACATTCCTACAATAGCCTTTTGTGACACTGATTCCCCAATGCGGTATGTTGA
TATTGGAATCCCAGCTAACAACAAGGGAAAACATAGCATTGGGTGTCTGTTTTGGCTTTTGGCAAGGATGGTACTACAAATGCGTGGAACTATTCGTGCTGGGCACAAAT
GGGATGTGATGGTTGATTTGTTTTTCTATCGCGAGCCTGAGGAAGCTAAGGAGAAAGAAGAGGAAGAGGCTCTTCCACCCCCAGATTTTGGCATTGCTGACTATGGTGCT
GCTCCACTTGTTGCATCAGATCAATGGACTTCACAAATTCCTGATGCTCAGTGGGGTGCTGCAGATGTGGTTGTTCCAGCCGCTGCTGCTCCACCCGCTTCCAATGATTG
GGCCCAAGAGCCAGTTGCTTTGGCATCAGAATGGGATGCTGCAGCAGCACCTCCACCACCGGCACCTGCTGTCGACGGTGCAGCACCTTCCTCTACCGGTGAATGGTAAT
TGAGAGATAGATGGTTCCTAACGAATTGTACTAAAATGGATTAATTGTTATGAGTTTGTTTGTTTAGAAATGTCACCCTTTTTGGTTGGAAAATCGACTCAATGTTTTTT
CATAGCCCAGTTTTAGATCTTAGATTGAATATTCAACTTATTACATTTTGGGTGTCTCGATACAATTTTTCTTTTTTTTCTTTTTTTTTTTTTTTGGGGAATATGTGAAA
TTACTTTCCCA
Protein sequenceShow/hide protein sequence
MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGT
FTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEKEEEE
ALPPPDFGIADYGAAPLVASDQWTSQIPDAQWGAADVVVPAAAAPPASNDWAQEPVALASEWDAAAAPPPPAPAVDGAAPSSTGEW