; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0003232 (gene) of Snake gourd v1 genome

Gene IDTan0003232
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionregulator of nonsense transcripts UPF3-like
Genome locationLG10:64670304..64677955
RNA-Seq ExpressionTan0003232
SyntenyTan0003232
Gene Ontology termsGO:0000184 - nuclear-transcribed mRNA catabolic process, nonsense-mediated decay (biological process)
GO:0045727 - positive regulation of translation (biological process)
GO:0005730 - nucleolus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR005120 - UPF3 domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily
IPR039722 - Nonsense-mediated mRNA decay protein 3


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008459659.1 PREDICTED: regulator of nonsense transcripts UPF3 isoform X1 [Cucumis melo]8.8e-26092.4Show/hide
Query:  MKDPLERTKVVIRHLPPSLPHSDLFHHIDDRFAGRYNWCYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR
        MKDPLERTKVVIRHLPPSL HSDLFHHI DRFAGR+NW YYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR
Subjt:  MKDPLERTKVVIRHLPPSLPHSDLFHHIDDRFAGRYNWCYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR

Query:  SSTKKDGREGTIYKDPDYLEFLKIIAKPAEHLPSAEIQLERKEAEQSGVAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKR
        SSTKKDGREGTIYKDPDYLEFLK+IAKPAEHLPSAEIQLERKEAEQSG AKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKR
Subjt:  SSTKKDGREGTIYKDPDYLEFLKIIAKPAEHLPSAEIQLERKEAEQSGVAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKR

Query:  GMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSSGIGISDAGTADSGKKKILLLKGKERDISHIADGMLQLQSTTSSGNSPASATKQNQRREAGGS
        GMEKKKYILKDSVKNTNRRDKSNFILVPRR+DQSA SSGIGISD G AD GKKKILLLKGKERDISH++D MLQLQS TSSGNSPASA+K N RREAGGS
Subjt:  GMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSSGIGISDAGTADSGKKKILLLKGKERDISHIADGMLQLQSTTSSGNSPASATKQNQRREAGGS

Query:  MIRSILLNNEARHGQISSAGQSHQKIQILNSDNGKRPPRPINARSGSNDMSINEPNPSGSEGDGKRATESKFNKKELHGLGNASEKQEKRIRNKDRPDRG
        +IRSILLNNEARHGQ SS  QSHQKIQILNSDNGKRPPRP NARSGSND+S NEPNPSGSEGDGKRA ++KF+KKELHGLG+ASEKQEKRIRNKDRPDRG
Subjt:  MIRSILLNNEARHGQISSAGQSHQKIQILNSDNGKRPPRPINARSGSNDMSINEPNPSGSEGDGKRATESKFNKKELHGLGNASEKQEKRIRNKDRPDRG

Query:  VWAPRSRSDASVSQLDESSVSQSSHLLSDSVEGYRGEMKDDIHGSRSGDATT-VSGRSSSVENGSVRHGGRRGAGHVMKDDGSLNPNEGKPSKRGVAGGH
        VWAPRSRSDASVSQL+ESSVSQSSHLLSDSVE YRGEMK+DIHGSR+ D TT VSGR+SSVENGSVRH GRRGAGHVMKDDGSLNPNEGKPSKRGVAGGH
Subjt:  VWAPRSRSDASVSQLDESSVSQSSHLLSDSVEGYRGEMKDDIHGSRSGDATT-VSGRSSSVENGSVRHGGRRGAGHVMKDDGSLNPNEGKPSKRGVAGGH

Query:  EKQVWVQKSSSGS
        EKQVWVQKSSSGS
Subjt:  EKQVWVQKSSSGS

XP_011656113.1 regulator of nonsense transcripts UPF3 isoform X1 [Cucumis sativus]5.1e-26092.4Show/hide
Query:  MKDPLERTKVVIRHLPPSLPHSDLFHHIDDRFAGRYNWCYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR
        MKDPLERTKVVIRHLPPSL HSDLFHHI DRFAGR+NW YYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR
Subjt:  MKDPLERTKVVIRHLPPSLPHSDLFHHIDDRFAGRYNWCYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR

Query:  SSTKKDGREGTIYKDPDYLEFLKIIAKPAEHLPSAEIQLERKEAEQSGVAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKR
        SSTKKDGREGTIYKDPDYLEFLK+IAKPAEHLPSAEIQLERKEAEQSG AKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKR
Subjt:  SSTKKDGREGTIYKDPDYLEFLKIIAKPAEHLPSAEIQLERKEAEQSGVAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKR

Query:  GMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSSGIGISDAGTADSGKKKILLLKGKERDISHIADGMLQLQSTTSSGNSPASATKQNQRREAGGS
        GMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSS IGISD GTAD GKKKILLLKGKERDISH++D MLQLQS TSSGNSPASA+K N RREAGG 
Subjt:  GMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSSGIGISDAGTADSGKKKILLLKGKERDISHIADGMLQLQSTTSSGNSPASATKQNQRREAGGS

Query:  MIRSILLNNEARHGQISSAGQSHQKIQILNSDNGKRPPRPINARSGSNDMSINEPNPSGSEGDGKRATESKFNKKELHGLGNASEKQEKRIRNKDRPDRG
        +IRSILLNNEARHGQ SS  QSHQKIQILNSDNGKRPPRP NARSGSND+S NEPNPSGSEGDGKRA+++KF+KKELHGLG+ASEKQEKRIRNKDRPDRG
Subjt:  MIRSILLNNEARHGQISSAGQSHQKIQILNSDNGKRPPRPINARSGSNDMSINEPNPSGSEGDGKRATESKFNKKELHGLGNASEKQEKRIRNKDRPDRG

Query:  VWAPRSRSDASVSQLDESSVSQSSHLLSDSVEGYRGEMKDDIHGSRSGDATT-VSGRSSSVENGSVRHGGRRGAGHVMKDDGSLNPNEGKPSKRGVAGGH
        VWAPRSRSDASVSQL+ESSV QSSHLLSDSVE +RGEMK+DIHGSR+GD TT VSGR+SSVENGSVRH GRRGAGHVMKDDGSLNPNEGKPSKRGVAGGH
Subjt:  VWAPRSRSDASVSQLDESSVSQSSHLLSDSVEGYRGEMKDDIHGSRSGDATT-VSGRSSSVENGSVRHGGRRGAGHVMKDDGSLNPNEGKPSKRGVAGGH

Query:  EKQVWVQKSSSGS
        EKQVWVQKSSSGS
Subjt:  EKQVWVQKSSSGS

XP_022149973.1 regulator of nonsense transcripts UPF3 isoform X1 [Momordica charantia]2.3e-26092.4Show/hide
Query:  MKDPLERTKVVIRHLPPSLPHSDLFHHIDDRFAGRYNWCYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR
        MKDPLERTKVVIRHLPPSLPHSDLFHHIDDRFAGRYNWCYYRPGKTSQKDQRY+RAYIDFTRPEDVFEFAEFFDGHVFVNEKG QYKAV+EYAPSQRVPR
Subjt:  MKDPLERTKVVIRHLPPSLPHSDLFHHIDDRFAGRYNWCYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR

Query:  SSTKKDGREGTIYKDPDYLEFLKIIAKPAEHLPSAEIQLERKEAEQSGVAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKR
        SSTKKDGR+GTIYKDPDYLEFLK+IAKPAEHLPSAEIQLERKEAEQSGVAKETPIVTPLMEFVRQKRAVESGTQGSSV RKVKRGG ASSRKPESNSMKR
Subjt:  SSTKKDGREGTIYKDPDYLEFLKIIAKPAEHLPSAEIQLERKEAEQSGVAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKR

Query:  GMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSSGIGISDAGTADSGKKKILLLKGKERDISHIADGMLQLQSTTSSGNSPASATKQNQRREAGGS
        GMEKKKYILKDSVKNTNRRDKSNFILVPRR+DQ ATSSGIGISD  TADSGKKKILLLKGKERDISH+ADGML LQS +SSGNSP +ATKQNQRREA GS
Subjt:  GMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSSGIGISDAGTADSGKKKILLLKGKERDISHIADGMLQLQSTTSSGNSPASATKQNQRREAGGS

Query:  MIRSILLNNEARHGQISSAGQSHQKIQILNSDNGKRPPRPINARSGSNDMSINEPNPSGSEGDGKRATESKFNKKELHGLGNASEKQEKRIRNKDRPDRG
        +IRSILLNNE RHGQ SS  QSHQKIQILNSDNGKRPPRPINARSGSNDMS NEPNPSGSEGDGKRA ESKF+KKELHGLG+ASEKQEKRIRNKDRPDRG
Subjt:  MIRSILLNNEARHGQISSAGQSHQKIQILNSDNGKRPPRPINARSGSNDMSINEPNPSGSEGDGKRATESKFNKKELHGLGNASEKQEKRIRNKDRPDRG

Query:  VWAPRSRSDASVSQLDESSVSQSSHLLSDSVEGYRGEMKDDIHGSRSGD-ATTVSGRSSSVENGSVRHGGRRGAGHVMKDDGSLNPNEGKPSKRGVAGGH
        VWAPRSRSDA VSQLDESS+SQSSHLLSDSVE +R EMKDDIHGSR+GD  TTVSGR SSVENGSVRH GRRGAGHVMKDDGSLNPNEGK SKRG+AGGH
Subjt:  VWAPRSRSDASVSQLDESSVSQSSHLLSDSVEGYRGEMKDDIHGSRSGD-ATTVSGRSSSVENGSVRHGGRRGAGHVMKDDGSLNPNEGKPSKRGVAGGH

Query:  EKQVWVQKSSSGS
        EKQVWVQKSSSGS
Subjt:  EKQVWVQKSSSGS

XP_022948756.1 regulator of nonsense transcripts UPF3-like isoform X1 [Cucurbita moschata]3.9e-26092.79Show/hide
Query:  MKDPLERTKVVIRHLPPSLPHSDLFHHIDDRFAGRYNWCYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR
        MKDPLERTKVVIRHLPPSLPHSDLFHHI DRFAGRYN CYYRPGKTSQK+QRYARAYIDFT PEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR
Subjt:  MKDPLERTKVVIRHLPPSLPHSDLFHHIDDRFAGRYNWCYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR

Query:  SSTKKDGREGTIYKDPDYLEFLKIIAKPAEHLPSAEIQLERKEAEQSGVAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKR
        SS+KKDGREGTIYKDPDYLEFLK+IAKPAEHLPSAEIQLERKEAEQSGVAK+TPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRG AASSRK ESNSMKR
Subjt:  SSTKKDGREGTIYKDPDYLEFLKIIAKPAEHLPSAEIQLERKEAEQSGVAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKR

Query:  GMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSSGIGISDAGTADSGKKKILLLKGKERDISHIADGMLQLQSTTSSGNSPASATKQNQRREAGGS
        GMEKKKYILKDS KNTNRRDKSNFILVPRREDQSATSSGIGISD GTADSGKKKILLLKGK RD+SHIADGMLQ QS TSSGNSPA+ATKQNQRREAGGS
Subjt:  GMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSSGIGISDAGTADSGKKKILLLKGKERDISHIADGMLQLQSTTSSGNSPASATKQNQRREAGGS

Query:  MIRSILLNNEARHGQISSAGQSHQKIQILNSDNGKRPPRPINARSGSNDMSINEPNPSGSEGDGKRATESKFNKKELHGLGNASEKQEKRIRNKDRPDRG
        MIRSILLNN+ARHGQ SS  QSHQKIQILNSDNGKRPPRPIN+RSGSNDMS N+PNPSGSEGDGKRA E+KFNKKE HGLGNASEKQEKRIRNKDRPDRG
Subjt:  MIRSILLNNEARHGQISSAGQSHQKIQILNSDNGKRPPRPINARSGSNDMSINEPNPSGSEGDGKRATESKFNKKELHGLGNASEKQEKRIRNKDRPDRG

Query:  VWAPRSRSDASVSQLDESSVSQSSHLLSDSVEGYRGEMKDDIHGSRSGD-ATTVSGRSSSVENGSVRHGGRRGAGHVMKDDGSLNPNEGKPSKRGVAGGH
        VWAPR RSDASVSQLDESSVSQS+HLLSDSVE YRGEMKDD+HGSR+GD  TTVSGRSSSVENGSVRH GRRGA H+MKDDGSLNPNEGKPS+RGVAGGH
Subjt:  VWAPRSRSDASVSQLDESSVSQSSHLLSDSVEGYRGEMKDDIHGSRSGD-ATTVSGRSSSVENGSVRHGGRRGAGHVMKDDGSLNPNEGKPSKRGVAGGH

Query:  EKQVWVQKSSSGS
        EKQVWVQKSSSGS
Subjt:  EKQVWVQKSSSGS

XP_022973412.1 regulator of nonsense transcripts UPF3-like isoform X1 [Cucurbita maxima]1.2e-26192.98Show/hide
Query:  MKDPLERTKVVIRHLPPSLPHSDLFHHIDDRFAGRYNWCYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR
        MKDPLERTKVVIRHLPPSLPHSDLFHHI DRFAGRYNWCY+RPGKTSQK+QRYARAYIDFT PEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR
Subjt:  MKDPLERTKVVIRHLPPSLPHSDLFHHIDDRFAGRYNWCYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR

Query:  SSTKKDGREGTIYKDPDYLEFLKIIAKPAEHLPSAEIQLERKEAEQSGVAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKR
        SS+KKDGREGTIYKDPDYLEFLK+IAKPAEHLPSAEIQLERKEAEQSGVAK+TPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRG AASSRK ESNSMKR
Subjt:  SSTKKDGREGTIYKDPDYLEFLKIIAKPAEHLPSAEIQLERKEAEQSGVAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKR

Query:  GMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSSGIGISDAGTADSGKKKILLLKGKERDISHIADGMLQLQSTTSSGNSPASATKQNQRREAGGS
        GMEKKKYILKDS KNTNRRDKSNFILVPRREDQSATSSGIGISD GTADSGKKKILLLKGK RD+SHIADGMLQ QS TSSGNSPA+ATKQNQRREAGGS
Subjt:  GMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSSGIGISDAGTADSGKKKILLLKGKERDISHIADGMLQLQSTTSSGNSPASATKQNQRREAGGS

Query:  MIRSILLNNEARHGQISSAGQSHQKIQILNSDNGKRPPRPINARSGSNDMSINEPNPSGSEGDGKRATESKFNKKELHGLGNASEKQEKRIRNKDRPDRG
        MIRSILLNN+ARHGQ SS  QSHQKIQILNSDNGKRPPRPIN+RSGSNDMS N+PNPSGSEGDGKRA E+KFNKKE HGLGNASEKQEKRIRNKDRPDRG
Subjt:  MIRSILLNNEARHGQISSAGQSHQKIQILNSDNGKRPPRPINARSGSNDMSINEPNPSGSEGDGKRATESKFNKKELHGLGNASEKQEKRIRNKDRPDRG

Query:  VWAPRSRSDASVSQLDESSVSQSSHLLSDSVEGYRGEMKDDIHGSRSGD-ATTVSGRSSSVENGSVRHGGRRGAGHVMKDDGSLNPNEGKPSKRGVAGGH
        VWAPR RSDASVSQLDESSVSQS+HLLSDSVE YRGEMKDD+HGSR+GD  TTVSGRSSSVENGSVRH GRRGA H+MKDDGSLNPNEGKPSKRGVAGGH
Subjt:  VWAPRSRSDASVSQLDESSVSQSSHLLSDSVEGYRGEMKDDIHGSRSGD-ATTVSGRSSSVENGSVRHGGRRGAGHVMKDDGSLNPNEGKPSKRGVAGGH

Query:  EKQVWVQKSSSGS
        EKQVWVQKSSSGS
Subjt:  EKQVWVQKSSSGS

TrEMBL top hitse value%identityAlignment
A0A0A0KSY5 Smg4_UPF3 domain-containing protein2.5e-26092.4Show/hide
Query:  MKDPLERTKVVIRHLPPSLPHSDLFHHIDDRFAGRYNWCYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR
        MKDPLERTKVVIRHLPPSL HSDLFHHI DRFAGR+NW YYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR
Subjt:  MKDPLERTKVVIRHLPPSLPHSDLFHHIDDRFAGRYNWCYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR

Query:  SSTKKDGREGTIYKDPDYLEFLKIIAKPAEHLPSAEIQLERKEAEQSGVAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKR
        SSTKKDGREGTIYKDPDYLEFLK+IAKPAEHLPSAEIQLERKEAEQSG AKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKR
Subjt:  SSTKKDGREGTIYKDPDYLEFLKIIAKPAEHLPSAEIQLERKEAEQSGVAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKR

Query:  GMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSSGIGISDAGTADSGKKKILLLKGKERDISHIADGMLQLQSTTSSGNSPASATKQNQRREAGGS
        GMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSS IGISD GTAD GKKKILLLKGKERDISH++D MLQLQS TSSGNSPASA+K N RREAGG 
Subjt:  GMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSSGIGISDAGTADSGKKKILLLKGKERDISHIADGMLQLQSTTSSGNSPASATKQNQRREAGGS

Query:  MIRSILLNNEARHGQISSAGQSHQKIQILNSDNGKRPPRPINARSGSNDMSINEPNPSGSEGDGKRATESKFNKKELHGLGNASEKQEKRIRNKDRPDRG
        +IRSILLNNEARHGQ SS  QSHQKIQILNSDNGKRPPRP NARSGSND+S NEPNPSGSEGDGKRA+++KF+KKELHGLG+ASEKQEKRIRNKDRPDRG
Subjt:  MIRSILLNNEARHGQISSAGQSHQKIQILNSDNGKRPPRPINARSGSNDMSINEPNPSGSEGDGKRATESKFNKKELHGLGNASEKQEKRIRNKDRPDRG

Query:  VWAPRSRSDASVSQLDESSVSQSSHLLSDSVEGYRGEMKDDIHGSRSGDATT-VSGRSSSVENGSVRHGGRRGAGHVMKDDGSLNPNEGKPSKRGVAGGH
        VWAPRSRSDASVSQL+ESSV QSSHLLSDSVE +RGEMK+DIHGSR+GD TT VSGR+SSVENGSVRH GRRGAGHVMKDDGSLNPNEGKPSKRGVAGGH
Subjt:  VWAPRSRSDASVSQLDESSVSQSSHLLSDSVEGYRGEMKDDIHGSRSGDATT-VSGRSSSVENGSVRHGGRRGAGHVMKDDGSLNPNEGKPSKRGVAGGH

Query:  EKQVWVQKSSSGS
        EKQVWVQKSSSGS
Subjt:  EKQVWVQKSSSGS

A0A1S3CB69 regulator of nonsense transcripts UPF3 isoform X14.2e-26092.4Show/hide
Query:  MKDPLERTKVVIRHLPPSLPHSDLFHHIDDRFAGRYNWCYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR
        MKDPLERTKVVIRHLPPSL HSDLFHHI DRFAGR+NW YYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR
Subjt:  MKDPLERTKVVIRHLPPSLPHSDLFHHIDDRFAGRYNWCYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR

Query:  SSTKKDGREGTIYKDPDYLEFLKIIAKPAEHLPSAEIQLERKEAEQSGVAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKR
        SSTKKDGREGTIYKDPDYLEFLK+IAKPAEHLPSAEIQLERKEAEQSG AKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKR
Subjt:  SSTKKDGREGTIYKDPDYLEFLKIIAKPAEHLPSAEIQLERKEAEQSGVAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKR

Query:  GMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSSGIGISDAGTADSGKKKILLLKGKERDISHIADGMLQLQSTTSSGNSPASATKQNQRREAGGS
        GMEKKKYILKDSVKNTNRRDKSNFILVPRR+DQSA SSGIGISD G AD GKKKILLLKGKERDISH++D MLQLQS TSSGNSPASA+K N RREAGGS
Subjt:  GMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSSGIGISDAGTADSGKKKILLLKGKERDISHIADGMLQLQSTTSSGNSPASATKQNQRREAGGS

Query:  MIRSILLNNEARHGQISSAGQSHQKIQILNSDNGKRPPRPINARSGSNDMSINEPNPSGSEGDGKRATESKFNKKELHGLGNASEKQEKRIRNKDRPDRG
        +IRSILLNNEARHGQ SS  QSHQKIQILNSDNGKRPPRP NARSGSND+S NEPNPSGSEGDGKRA ++KF+KKELHGLG+ASEKQEKRIRNKDRPDRG
Subjt:  MIRSILLNNEARHGQISSAGQSHQKIQILNSDNGKRPPRPINARSGSNDMSINEPNPSGSEGDGKRATESKFNKKELHGLGNASEKQEKRIRNKDRPDRG

Query:  VWAPRSRSDASVSQLDESSVSQSSHLLSDSVEGYRGEMKDDIHGSRSGDATT-VSGRSSSVENGSVRHGGRRGAGHVMKDDGSLNPNEGKPSKRGVAGGH
        VWAPRSRSDASVSQL+ESSVSQSSHLLSDSVE YRGEMK+DIHGSR+ D TT VSGR+SSVENGSVRH GRRGAGHVMKDDGSLNPNEGKPSKRGVAGGH
Subjt:  VWAPRSRSDASVSQLDESSVSQSSHLLSDSVEGYRGEMKDDIHGSRSGDATT-VSGRSSSVENGSVRHGGRRGAGHVMKDDGSLNPNEGKPSKRGVAGGH

Query:  EKQVWVQKSSSGS
        EKQVWVQKSSSGS
Subjt:  EKQVWVQKSSSGS

A0A6J1D8M3 regulator of nonsense transcripts UPF3 isoform X11.1e-26092.4Show/hide
Query:  MKDPLERTKVVIRHLPPSLPHSDLFHHIDDRFAGRYNWCYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR
        MKDPLERTKVVIRHLPPSLPHSDLFHHIDDRFAGRYNWCYYRPGKTSQKDQRY+RAYIDFTRPEDVFEFAEFFDGHVFVNEKG QYKAV+EYAPSQRVPR
Subjt:  MKDPLERTKVVIRHLPPSLPHSDLFHHIDDRFAGRYNWCYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR

Query:  SSTKKDGREGTIYKDPDYLEFLKIIAKPAEHLPSAEIQLERKEAEQSGVAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKR
        SSTKKDGR+GTIYKDPDYLEFLK+IAKPAEHLPSAEIQLERKEAEQSGVAKETPIVTPLMEFVRQKRAVESGTQGSSV RKVKRGG ASSRKPESNSMKR
Subjt:  SSTKKDGREGTIYKDPDYLEFLKIIAKPAEHLPSAEIQLERKEAEQSGVAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKR

Query:  GMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSSGIGISDAGTADSGKKKILLLKGKERDISHIADGMLQLQSTTSSGNSPASATKQNQRREAGGS
        GMEKKKYILKDSVKNTNRRDKSNFILVPRR+DQ ATSSGIGISD  TADSGKKKILLLKGKERDISH+ADGML LQS +SSGNSP +ATKQNQRREA GS
Subjt:  GMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSSGIGISDAGTADSGKKKILLLKGKERDISHIADGMLQLQSTTSSGNSPASATKQNQRREAGGS

Query:  MIRSILLNNEARHGQISSAGQSHQKIQILNSDNGKRPPRPINARSGSNDMSINEPNPSGSEGDGKRATESKFNKKELHGLGNASEKQEKRIRNKDRPDRG
        +IRSILLNNE RHGQ SS  QSHQKIQILNSDNGKRPPRPINARSGSNDMS NEPNPSGSEGDGKRA ESKF+KKELHGLG+ASEKQEKRIRNKDRPDRG
Subjt:  MIRSILLNNEARHGQISSAGQSHQKIQILNSDNGKRPPRPINARSGSNDMSINEPNPSGSEGDGKRATESKFNKKELHGLGNASEKQEKRIRNKDRPDRG

Query:  VWAPRSRSDASVSQLDESSVSQSSHLLSDSVEGYRGEMKDDIHGSRSGD-ATTVSGRSSSVENGSVRHGGRRGAGHVMKDDGSLNPNEGKPSKRGVAGGH
        VWAPRSRSDA VSQLDESS+SQSSHLLSDSVE +R EMKDDIHGSR+GD  TTVSGR SSVENGSVRH GRRGAGHVMKDDGSLNPNEGK SKRG+AGGH
Subjt:  VWAPRSRSDASVSQLDESSVSQSSHLLSDSVEGYRGEMKDDIHGSRSGD-ATTVSGRSSSVENGSVRHGGRRGAGHVMKDDGSLNPNEGKPSKRGVAGGH

Query:  EKQVWVQKSSSGS
        EKQVWVQKSSSGS
Subjt:  EKQVWVQKSSSGS

A0A6J1GA31 regulator of nonsense transcripts UPF3-like isoform X11.9e-26092.79Show/hide
Query:  MKDPLERTKVVIRHLPPSLPHSDLFHHIDDRFAGRYNWCYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR
        MKDPLERTKVVIRHLPPSLPHSDLFHHI DRFAGRYN CYYRPGKTSQK+QRYARAYIDFT PEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR
Subjt:  MKDPLERTKVVIRHLPPSLPHSDLFHHIDDRFAGRYNWCYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR

Query:  SSTKKDGREGTIYKDPDYLEFLKIIAKPAEHLPSAEIQLERKEAEQSGVAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKR
        SS+KKDGREGTIYKDPDYLEFLK+IAKPAEHLPSAEIQLERKEAEQSGVAK+TPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRG AASSRK ESNSMKR
Subjt:  SSTKKDGREGTIYKDPDYLEFLKIIAKPAEHLPSAEIQLERKEAEQSGVAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKR

Query:  GMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSSGIGISDAGTADSGKKKILLLKGKERDISHIADGMLQLQSTTSSGNSPASATKQNQRREAGGS
        GMEKKKYILKDS KNTNRRDKSNFILVPRREDQSATSSGIGISD GTADSGKKKILLLKGK RD+SHIADGMLQ QS TSSGNSPA+ATKQNQRREAGGS
Subjt:  GMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSSGIGISDAGTADSGKKKILLLKGKERDISHIADGMLQLQSTTSSGNSPASATKQNQRREAGGS

Query:  MIRSILLNNEARHGQISSAGQSHQKIQILNSDNGKRPPRPINARSGSNDMSINEPNPSGSEGDGKRATESKFNKKELHGLGNASEKQEKRIRNKDRPDRG
        MIRSILLNN+ARHGQ SS  QSHQKIQILNSDNGKRPPRPIN+RSGSNDMS N+PNPSGSEGDGKRA E+KFNKKE HGLGNASEKQEKRIRNKDRPDRG
Subjt:  MIRSILLNNEARHGQISSAGQSHQKIQILNSDNGKRPPRPINARSGSNDMSINEPNPSGSEGDGKRATESKFNKKELHGLGNASEKQEKRIRNKDRPDRG

Query:  VWAPRSRSDASVSQLDESSVSQSSHLLSDSVEGYRGEMKDDIHGSRSGD-ATTVSGRSSSVENGSVRHGGRRGAGHVMKDDGSLNPNEGKPSKRGVAGGH
        VWAPR RSDASVSQLDESSVSQS+HLLSDSVE YRGEMKDD+HGSR+GD  TTVSGRSSSVENGSVRH GRRGA H+MKDDGSLNPNEGKPS+RGVAGGH
Subjt:  VWAPRSRSDASVSQLDESSVSQSSHLLSDSVEGYRGEMKDDIHGSRSGD-ATTVSGRSSSVENGSVRHGGRRGAGHVMKDDGSLNPNEGKPSKRGVAGGH

Query:  EKQVWVQKSSSGS
        EKQVWVQKSSSGS
Subjt:  EKQVWVQKSSSGS

A0A6J1I7G4 regulator of nonsense transcripts UPF3-like isoform X15.9e-26292.98Show/hide
Query:  MKDPLERTKVVIRHLPPSLPHSDLFHHIDDRFAGRYNWCYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR
        MKDPLERTKVVIRHLPPSLPHSDLFHHI DRFAGRYNWCY+RPGKTSQK+QRYARAYIDFT PEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR
Subjt:  MKDPLERTKVVIRHLPPSLPHSDLFHHIDDRFAGRYNWCYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR

Query:  SSTKKDGREGTIYKDPDYLEFLKIIAKPAEHLPSAEIQLERKEAEQSGVAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKR
        SS+KKDGREGTIYKDPDYLEFLK+IAKPAEHLPSAEIQLERKEAEQSGVAK+TPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRG AASSRK ESNSMKR
Subjt:  SSTKKDGREGTIYKDPDYLEFLKIIAKPAEHLPSAEIQLERKEAEQSGVAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKR

Query:  GMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSSGIGISDAGTADSGKKKILLLKGKERDISHIADGMLQLQSTTSSGNSPASATKQNQRREAGGS
        GMEKKKYILKDS KNTNRRDKSNFILVPRREDQSATSSGIGISD GTADSGKKKILLLKGK RD+SHIADGMLQ QS TSSGNSPA+ATKQNQRREAGGS
Subjt:  GMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSSGIGISDAGTADSGKKKILLLKGKERDISHIADGMLQLQSTTSSGNSPASATKQNQRREAGGS

Query:  MIRSILLNNEARHGQISSAGQSHQKIQILNSDNGKRPPRPINARSGSNDMSINEPNPSGSEGDGKRATESKFNKKELHGLGNASEKQEKRIRNKDRPDRG
        MIRSILLNN+ARHGQ SS  QSHQKIQILNSDNGKRPPRPIN+RSGSNDMS N+PNPSGSEGDGKRA E+KFNKKE HGLGNASEKQEKRIRNKDRPDRG
Subjt:  MIRSILLNNEARHGQISSAGQSHQKIQILNSDNGKRPPRPINARSGSNDMSINEPNPSGSEGDGKRATESKFNKKELHGLGNASEKQEKRIRNKDRPDRG

Query:  VWAPRSRSDASVSQLDESSVSQSSHLLSDSVEGYRGEMKDDIHGSRSGD-ATTVSGRSSSVENGSVRHGGRRGAGHVMKDDGSLNPNEGKPSKRGVAGGH
        VWAPR RSDASVSQLDESSVSQS+HLLSDSVE YRGEMKDD+HGSR+GD  TTVSGRSSSVENGSVRH GRRGA H+MKDDGSLNPNEGKPSKRGVAGGH
Subjt:  VWAPRSRSDASVSQLDESSVSQSSHLLSDSVEGYRGEMKDDIHGSRSGD-ATTVSGRSSSVENGSVRHGGRRGAGHVMKDDGSLNPNEGKPSKRGVAGGH

Query:  EKQVWVQKSSSGS
        EKQVWVQKSSSGS
Subjt:  EKQVWVQKSSSGS

SwissProt top hitse value%identityAlignment
B0S733 Regulator of nonsense transcripts 3A1.7e-1626.18Show/hide
Query:  TKVVIRHLPPSLPHSDLFHHIDDRFAGRYNWCYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPRSS-TKKD
        +KVVIR LPPSL    L  H+       +++  + P   S     ++RAYI+F  PED+  F + FDG+VF++ KG +Y AVVE+AP Q+V +    KKD
Subjt:  TKVVIRHLPPSLPHSDLFHHIDDRFAGRYNWCYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPRSS-TKKD

Query:  GREGTIYKDPDYLEFL--------KIIAKPAEHLPSAEIQLERKEAEQSGVAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSM
         + GTI +DP+Y  FL        K +A P   L   EI+ + +E     +AK T   TPL+E+++ K+  +   +      + +R      ++ E    
Subjt:  GREGTIYKDPDYLEFL--------KIIAKPAEHLPSAEIQLERKEAEQSGVAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSM

Query:  KRGMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSSGIGISDAGTADSGKKKILLLKGKERDISHIADGMLQLQSTTSSGNSPASATKQNQRREAG
        +R  E++K   K++ K     +K                              + KI LLK  +RD    +D   +L+    SG      T++N+  + G
Subjt:  KRGMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSSGIGISDAGTADSGKKKILLLKGKERDISHIADGMLQLQSTTSSGNSPASATKQNQRREAG

Query:  GSMIRSILLNNEARHGQISSAGQSHQKIQILNSDNGKRPPRPINARSGSNDMSINEPNPSGSEGDGKRATESKFNKKELHGLGNASEKQEK---------
        G        +N ++        + H + Q      G+   R         D  +     +     GK   + +  K + HG     E  +K         
Subjt:  GSMIRSILLNNEARHGQISSAGQSHQKIQILNSDNGKRPPRPINARSGSNDMSINEPNPSGSEGDGKRATESKFNKKELHGLGNASEKQEK---------

Query:  -----RIRNKDRPDRGVWAPRSRS
             RIRNKDRP   ++ P +R+
Subjt:  -----RIRNKDRPDRGVWAPRSRS

Q10267 Nonsense-mediated mRNA decay protein 35.7e-1225.84Show/hide
Query:  KVVIRHLPPSLPHSDLFHHIDDRFAGRYNWCYYRPGKTS--QKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPRSSTKKD
        KV++ +LPP+LP       I+  F     W  +  GK +   + +  + AY+ F     V EF   + GH F+++K   Y+A+V  AP Q++P S  K D
Subjt:  KVVIRHLPPSLPHSDLFHHIDDRFAGRYNWCYYRPGKTS--QKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPRSSTKKD

Query:  GREGTIYKDPDYLEFLKIIAKPAEHLPSAEIQLERKEAEQSGVAKETPIVTPLMEFVRQKR--AVESGTQGSSVPRKVKRGGAASSRKPESNSMKRG---
          EG++ +DP + EF              + +   + A    V ++    TPL++++ +K+   VE G    S      +     + KP SN+ K G   
Subjt:  GREGTIYKDPDYLEFLKIIAKPAEHLPSAEIQLERKEAEQSGVAKETPIVTPLMEFVRQKR--AVESGTQGSSVPRKVKRGGAASSRKPESNSMKRG---

Query:  MEKKK----------YILKDSVKNTNRRDKSNFILVPRREDQSATSSGIGISDAGTAD---SGKKKI
         E KK           ++K+   +  ++ K      P   + +A+ +    SD  T +   SGK+KI
Subjt:  MEKKK----------YILKDSVKNTNRRDKSNFILVPRREDQSATSSGIGISDAGTAD---SGKKKI

Q9BZI7 Regulator of nonsense transcripts 3B3.1e-1827.94Show/hide
Query:  TKVVIRHLPPSLPHSDLFHHIDDRFAGRYNWCYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPRSSTKK-D
        +KVVIR LPP+L    L  H+       +++  +    TS     YARAYI+F   ED+  F + FDG+VF++ KG +Y A+VE+AP Q+  +  TKK D
Subjt:  TKVVIRHLPPSLPHSDLFHHIDDRFAGRYNWCYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPRSSTKK-D

Query:  GREGTIYKDPDYLEFLKIIAKPAEHLPSA-EIQLERKEAE-QSGVAKETPIVTPLMEFVRQKRAVESGTQGS----SVPRKVKRGGAASSRKPESNSMKR
         + GTI  DP+Y +FL+  A   E + S  E  LE  EA+ +  +AK+T   TPL+ F++ K+ +    +       + RK +R       K E    ++
Subjt:  GREGTIYKDPDYLEFLKIIAKPAEHLPSA-EIQLERKEAE-QSGVAKETPIVTPLMEFVRQKRAVESGTQGS----SVPRKVKRGGAASSRKPESNSMKR

Query:  GMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSSGIGISDAGTADSGKKKIL--LLKGKERDISHIADGMLQLQSTTSSGNSPASATKQNQRR--E
         +EK K I  D +   ++      I V R   Q+     +        + G +K L    K K+ D  +++D     QS T    S +    +  +R  +
Subjt:  GMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSSGIGISDAGTADSGKKKIL--LLKGKERDISHIADGMLQLQSTTSSGNSPASATKQNQRR--E

Query:  AGGSMIRSILLNNEARHGQISSAGQSHQKIQILNSDNGKRPPRPINARSGSNDMSINEPNPSGSEGDGKRATESKFNKKELHGLGNASEKQEK-----RI
          G   R      E    +I    +  ++ +       +R  +    +    +M          E D  R    K    E  G    +EK+E+     RI
Subjt:  AGGSMIRSILLNNEARHGQISSAGQSHQKIQILNSDNGKRPPRPINARSGSNDMSINEPNPSGSEGDGKRATESKFNKKELHGLGNASEKQEK-----RI

Query:  RNKDRPDRGVWAPRSRSDASVSQLDESSVSQSS
        RNKDRP   ++ P +RS   +   D+S+ S  S
Subjt:  RNKDRPDRGVWAPRSRSDASVSQLDESSVSQSS

Q9FVW4 Regulator of nonsense transcripts UPF32.4e-11147.74Show/hide
Query:  MKDPLERTKVVIRHLPPSLPHSDLFHHIDDRFAGRYNWCYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR
        MK+PL++ KVV+RHLPPSL  SDL   ID RFA RYNW  +RPGK+S K+Q+Y+RAY+ F  PEDV+EFA FF+GHVFVNEKGAQ+KA+VEYAPSQRVP+
Subjt:  MKDPLERTKVVIRHLPPSLPHSDLFHHIDDRFAGRYNWCYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR

Query:  SSTKKDGREGTIYKDPDYLEFLKIIAKPAEHLPSAEIQLERKEAEQSGVAKETPIVTPLMEFVRQKRAVESGTQG-SSVPRKVKRGGAASSRKPESNSMK
         S KKD REG+I KDPDYLEFLK+IA+P E+LPSAEIQLER+EAEQSG +K  PIVTPLMEF+RQKRA   G QG S + R  +R    S+ KP     K
Subjt:  SSTKKDGREGTIYKDPDYLEFLKIIAKPAEHLPSAEIQLERKEAEQSGVAKETPIVTPLMEFVRQKRAVESGTQG-SSVPRKVKRGGAASSRKPESNSMK

Query:  RGMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSSG-----------IGISDAG---TADSGKKKILLLKGKERDISHIADGMLQLQSTTSSGNSP
        R  EKKKY+ K+S KN  R+  ++ +   + + + + SSG           I  S  G   T DSGKKKILLL+ K+RD         +    T+   + 
Subjt:  RGMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSSG-----------IGISDAG---TADSGKKKILLLKGKERDISHIADGMLQLQSTTSSGNSP

Query:  ASATKQNQRREAGGSMIRSILLNNEARHGQISSAGQSHQKIQILNSDNGKRPPRPINARSGSNDMSINEPNPSGSEGDGKRATESKFNKKELHGLGNASE
        ++ ++QNQ+ + GG +I+ ILL N++R  Q S+  QS Q+++   ++N KRP RP N R+G                            K+ H  G  SE
Subjt:  ASATKQNQRREAGGSMIRSILLNNEARHGQISSAGQSHQKIQILNSDNGKRPPRPINARSGSNDMSINEPNPSGSEGDGKRATESKFNKKELHGLGNASE

Query:  KQEKRIRNKDRPDRGVWAPRSRSDASVSQLDESSVSQSSHLLSDSVEGYRGEMKDDIHGSRSGDATTVSGRSSSVENGSVRHGGRRGAGHVMKDDGSLNP
        KQE+R RNKDRPDR +WAP  R D S  Q   S+             G  GE+KD +   RSG+    SG   ++ENGS RH  RR  G   K++  +  
Subjt:  KQEKRIRNKDRPDRGVWAPRSRSDASVSQLDESSVSQSSHLLSDSVEGYRGEMKDDIHGSRSGDATTVSGRSSSVENGSVRHGGRRGAGHVMKDDGSLNP

Query:  NEGKPSKRGVAGG---HEKQVWVQKSSSGS
         EGK S+RG  GG   HEKQ+W+QK SSG+
Subjt:  NEGKPSKRGVAGG---HEKQVWVQKSSSGS

Q9H1J1 Regulator of nonsense transcripts 3A2.2e-1122.71Show/hide
Query:  TKVVIRHLPPSLPHSDLFHHIDDRFAGRYNWCYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPRSS-TKKD
        +KVVIR LPP L    L   +  R    +++  +     S     Y+RAYI+F  P+D+  F + FDG++F++ KG +Y AVVE+AP Q++ +    KKD
Subjt:  TKVVIRHLPPSLPHSDLFHHIDDRFAGRYNWCYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPRSS-TKKD

Query:  GREGTIYKDPDYLEFLKIIAKPAEHL-PSAEIQLERKEAE-QSGVAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKRGMEK
         + G+I  DP+Y +FL+      E    + E  L   EA+ +  +A+ T   TPL+E+++ ++  +   +     R+ +R      ++      +R  E+
Subjt:  GREGTIYKDPDYLEFLKIIAKPAEHL-PSAEIQLERKEAE-QSGVAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKRGMEK

Query:  KKYILKDSVKNTNRRDKSNFILVPRREDQSATSSGIGISDAGTADSGKKKILLLKGKERDISHIADGMLQLQSTTSSGNSPASATKQNQRREAGGSMIRS
        ++   K++ K     +K   I + ++ ++          +  T +  K+     +G+E D            +   +     S  +  +   +G      
Subjt:  KKYILKDSVKNTNRRDKSNFILVPRREDQSATSSGIGISDAGTADSGKKKILLLKGKERDISHIADGMLQLQSTTSSGNSPASATKQNQRREAGGSMIRS

Query:  ILLNNEARHGQISSAGQSHQKIQILNSDNGKR-----PPRPINARSGSNDMSINEPNPSGSEGDGKRATESKFNKKELHGLGNASE------KQEKRIRN
            ++  H  +  + +   + Q  + D+G+R      P  ++ RS         P   G +   K + +S    + +  LG A         +++R+ N
Subjt:  ILLNNEARHGQISSAGQSHQKIQILNSDNGKR-----PPRPINARSGSNDMSINEPNPSGSEGDGKRATESKFNKKELHGLGNASE------KQEKRIRN

Query:  KDRPDRGVWAPRSR
        KDRP   ++ P +R
Subjt:  KDRPDRGVWAPRSR

Arabidopsis top hitse value%identityAlignment
AT1G33980.1 Smg-4/UPF3 family protein1.7e-11247.74Show/hide
Query:  MKDPLERTKVVIRHLPPSLPHSDLFHHIDDRFAGRYNWCYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR
        MK+PL++ KVV+RHLPPSL  SDL   ID RFA RYNW  +RPGK+S K+Q+Y+RAY+ F  PEDV+EFA FF+GHVFVNEKGAQ+KA+VEYAPSQRVP+
Subjt:  MKDPLERTKVVIRHLPPSLPHSDLFHHIDDRFAGRYNWCYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR

Query:  SSTKKDGREGTIYKDPDYLEFLKIIAKPAEHLPSAEIQLERKEAEQSGVAKETPIVTPLMEFVRQKRAVESGTQG-SSVPRKVKRGGAASSRKPESNSMK
         S KKD REG+I KDPDYLEFLK+IA+P E+LPSAEIQLER+EAEQSG +K  PIVTPLMEF+RQKRA   G QG S + R  +R    S+ KP     K
Subjt:  SSTKKDGREGTIYKDPDYLEFLKIIAKPAEHLPSAEIQLERKEAEQSGVAKETPIVTPLMEFVRQKRAVESGTQG-SSVPRKVKRGGAASSRKPESNSMK

Query:  RGMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSSG-----------IGISDAG---TADSGKKKILLLKGKERDISHIADGMLQLQSTTSSGNSP
        R  EKKKY+ K+S KN  R+  ++ +   + + + + SSG           I  S  G   T DSGKKKILLL+ K+RD         +    T+   + 
Subjt:  RGMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSSG-----------IGISDAG---TADSGKKKILLLKGKERDISHIADGMLQLQSTTSSGNSP

Query:  ASATKQNQRREAGGSMIRSILLNNEARHGQISSAGQSHQKIQILNSDNGKRPPRPINARSGSNDMSINEPNPSGSEGDGKRATESKFNKKELHGLGNASE
        ++ ++QNQ+ + GG +I+ ILL N++R  Q S+  QS Q+++   ++N KRP RP N R+G                            K+ H  G  SE
Subjt:  ASATKQNQRREAGGSMIRSILLNNEARHGQISSAGQSHQKIQILNSDNGKRPPRPINARSGSNDMSINEPNPSGSEGDGKRATESKFNKKELHGLGNASE

Query:  KQEKRIRNKDRPDRGVWAPRSRSDASVSQLDESSVSQSSHLLSDSVEGYRGEMKDDIHGSRSGDATTVSGRSSSVENGSVRHGGRRGAGHVMKDDGSLNP
        KQE+R RNKDRPDR +WAP  R D S  Q   S+             G  GE+KD +   RSG+    SG   ++ENGS RH  RR  G   K++  +  
Subjt:  KQEKRIRNKDRPDRGVWAPRSRSDASVSQLDESSVSQSSHLLSDSVEGYRGEMKDDIHGSRSGDATTVSGRSSSVENGSVRHGGRRGAGHVMKDDGSLNP

Query:  NEGKPSKRGVAGG---HEKQVWVQKSSSGS
         EGK S+RG  GG   HEKQ+W+QK SSG+
Subjt:  NEGKPSKRGVAGG---HEKQVWVQKSSSGS

AT1G33980.2 Smg-4/UPF3 family protein1.6e-11047.37Show/hide
Query:  MKDPLERTKVVIRHLPPSLPHSDLFHHIDDRFAGRYNWCYYRPGKT--SQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRV
        MK+PL++ KVV+RHLPPSL  SDL   ID RFA RYNW  +RPGK+    K+Q+Y+RAY+ F  PEDV+EFA FF+GHVFVNEKGAQ+KA+VEYAPSQRV
Subjt:  MKDPLERTKVVIRHLPPSLPHSDLFHHIDDRFAGRYNWCYYRPGKT--SQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRV

Query:  PRSSTKKDGREGTIYKDPDYLEFLKIIAKPAEHLPSAEIQLERKEAEQSGVAKETPIVTPLMEFVRQKRAVESGTQG-SSVPRKVKRGGAASSRKPESNS
        P+ S KKD REG+I KDPDYLEFLK+IA+P E+LPSAEIQLER+EAEQSG +K  PIVTPLMEF+RQKRA   G QG S + R  +R    S+ KP    
Subjt:  PRSSTKKDGREGTIYKDPDYLEFLKIIAKPAEHLPSAEIQLERKEAEQSGVAKETPIVTPLMEFVRQKRAVESGTQG-SSVPRKVKRGGAASSRKPESNS

Query:  MKRGMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSSG-----------IGISDAG---TADSGKKKILLLKGKERDISHIADGMLQLQSTTSSGN
         KR  EKKKY+ K+S KN  R+  ++ +   + + + + SSG           I  S  G   T DSGKKKILLL+ K+RD         +    T+   
Subjt:  MKRGMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSSG-----------IGISDAG---TADSGKKKILLLKGKERDISHIADGMLQLQSTTSSGN

Query:  SPASATKQNQRREAGGSMIRSILLNNEARHGQISSAGQSHQKIQILNSDNGKRPPRPINARSGSNDMSINEPNPSGSEGDGKRATESKFNKKELHGLGNA
        + ++ ++QNQ+ + GG +I+ ILL N++R  Q S+  QS Q+++   ++N KRP RP N R+G                            K+ H  G  
Subjt:  SPASATKQNQRREAGGSMIRSILLNNEARHGQISSAGQSHQKIQILNSDNGKRPPRPINARSGSNDMSINEPNPSGSEGDGKRATESKFNKKELHGLGNA

Query:  SEKQEKRIRNKDRPDRGVWAPRSRSDASVSQLDESSVSQSSHLLSDSVEGYRGEMKDDIHGSRSGDATTVSGRSSSVENGSVRHGGRRGAGHVMKDDGSL
        SEKQE+R RNKDRPDR +WAP  R D S  Q   S+             G  GE+KD +   RSG+    SG   ++ENGS RH  RR  G   K++  +
Subjt:  SEKQEKRIRNKDRPDRGVWAPRSRSDASVSQLDESSVSQSSHLLSDSVEGYRGEMKDDIHGSRSGDATTVSGRSSSVENGSVRHGGRRGAGHVMKDDGSL

Query:  NPNEGKPSKRGVAGG---HEKQVWVQKSSSGS
           EGK S+RG  GG   HEKQ+W+QK SSG+
Subjt:  NPNEGKPSKRGVAGG---HEKQVWVQKSSSGS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGACCCGTTGGAGAGGACCAAAGTAGTGATTAGGCACTTGCCCCCTTCTCTTCCTCACTCAGATCTCTTCCACCATATTGATGATCGATTCGCTGGTCGCTACAA
TTGGTGTTACTATCGTCCCGGAAAGACCAGTCAGAAGGACCAGAGGTACGCTCGGGCCTACATAGATTTTACGAGACCTGAAGATGTTTTTGAGTTTGCGGAGTTCTTTG
ATGGGCATGTTTTCGTTAATGAGAAGGGTGCTCAGTATAAGGCTGTAGTTGAATATGCACCTTCACAGCGTGTTCCAAGATCATCTACCAAGAAGGATGGTCGTGAGGGG
ACTATATACAAAGATCCTGATTATTTGGAGTTTCTCAAAATCATTGCAAAGCCTGCTGAGCATCTTCCGAGTGCTGAAATCCAGTTGGAAAGAAAAGAAGCAGAGCAATC
TGGTGTTGCAAAAGAAACTCCAATTGTTACCCCTCTCATGGAGTTTGTTCGGCAGAAACGAGCAGTTGAAAGTGGAACTCAGGGATCTTCAGTACCTCGGAAGGTTAAAA
GAGGTGGGGCAGCATCCTCTAGAAAGCCTGAGTCGAATTCCATGAAGCGAGGGATGGAGAAGAAAAAGTATATTTTAAAGGACAGTGTGAAGAACACAAACCGCAGAGAC
AAGTCAAATTTCATTTTGGTGCCCAGGCGAGAGGATCAGTCAGCCACTTCAAGTGGAATTGGAATTTCTGATGCTGGTACAGCTGACTCTGGAAAGAAAAAAATTCTGCT
TCTCAAGGGGAAAGAGCGAGATATATCGCATATTGCTGATGGCATGTTACAGTTGCAGAGCACGACATCTTCTGGGAATTCTCCTGCTAGTGCTACAAAGCAGAATCAGA
GGCGTGAGGCTGGTGGAAGCATGATCAGGAGCATTCTTTTAAATAATGAAGCACGTCATGGGCAGATTTCATCAGCAGGCCAGTCTCATCAAAAAATTCAGATCCTGAAC
TCGGACAATGGGAAGCGACCACCTCGTCCTATTAATGCTCGATCTGGGTCTAATGATATGTCTATTAACGAACCAAACCCATCCGGTTCAGAAGGGGATGGAAAAAGGGC
TACAGAAAGTAAGTTTAATAAAAAGGAGCTTCATGGCCTGGGTAATGCTAGTGAGAAGCAAGAAAAACGAATAAGAAACAAAGATAGACCTGATCGTGGGGTCTGGGCGC
CACGCAGTCGTTCAGATGCCTCAGTCTCACAACTTGATGAATCCTCTGTTTCACAATCTAGTCATTTGCTTTCTGACTCGGTTGAAGGATACCGTGGCGAAATGAAAGAT
GATATTCATGGAAGCAGGAGTGGGGATGCAACCACTGTGAGTGGACGTAGCAGTTCAGTGGAGAATGGTTCTGTTAGACATGGTGGACGTCGTGGGGCTGGCCATGTTAT
GAAGGATGATGGGTCTTTGAACCCAAATGAAGGGAAGCCATCCAAAAGAGGTGTTGCCGGTGGCCATGAGAAACAAGTATGGGTTCAGAAGTCATCTTCAGGTTCTTAA
mRNA sequenceShow/hide mRNA sequence
CCCGAACTCTCTCTCGTCGTTAGTAACCCCAATTCCAACTTCCCCAAATAAACATTTTCTCCTTCTTCTTTTGCTTAAAATTGTTGAGAAATTAGAAACAAAAGCCAAAG
CCAGAAAGGAATTTTCAATTTCTCTTGGGGTTTTTCAGATGAAGGACCCGTTGGAGAGGACCAAAGTAGTGATTAGGCACTTGCCCCCTTCTCTTCCTCACTCAGATCTC
TTCCACCATATTGATGATCGATTCGCTGGTCGCTACAATTGGTGTTACTATCGTCCCGGAAAGACCAGTCAGAAGGACCAGAGGTACGCTCGGGCCTACATAGATTTTAC
GAGACCTGAAGATGTTTTTGAGTTTGCGGAGTTCTTTGATGGGCATGTTTTCGTTAATGAGAAGGGTGCTCAGTATAAGGCTGTAGTTGAATATGCACCTTCACAGCGTG
TTCCAAGATCATCTACCAAGAAGGATGGTCGTGAGGGGACTATATACAAAGATCCTGATTATTTGGAGTTTCTCAAAATCATTGCAAAGCCTGCTGAGCATCTTCCGAGT
GCTGAAATCCAGTTGGAAAGAAAAGAAGCAGAGCAATCTGGTGTTGCAAAAGAAACTCCAATTGTTACCCCTCTCATGGAGTTTGTTCGGCAGAAACGAGCAGTTGAAAG
TGGAACTCAGGGATCTTCAGTACCTCGGAAGGTTAAAAGAGGTGGGGCAGCATCCTCTAGAAAGCCTGAGTCGAATTCCATGAAGCGAGGGATGGAGAAGAAAAAGTATA
TTTTAAAGGACAGTGTGAAGAACACAAACCGCAGAGACAAGTCAAATTTCATTTTGGTGCCCAGGCGAGAGGATCAGTCAGCCACTTCAAGTGGAATTGGAATTTCTGAT
GCTGGTACAGCTGACTCTGGAAAGAAAAAAATTCTGCTTCTCAAGGGGAAAGAGCGAGATATATCGCATATTGCTGATGGCATGTTACAGTTGCAGAGCACGACATCTTC
TGGGAATTCTCCTGCTAGTGCTACAAAGCAGAATCAGAGGCGTGAGGCTGGTGGAAGCATGATCAGGAGCATTCTTTTAAATAATGAAGCACGTCATGGGCAGATTTCAT
CAGCAGGCCAGTCTCATCAAAAAATTCAGATCCTGAACTCGGACAATGGGAAGCGACCACCTCGTCCTATTAATGCTCGATCTGGGTCTAATGATATGTCTATTAACGAA
CCAAACCCATCCGGTTCAGAAGGGGATGGAAAAAGGGCTACAGAAAGTAAGTTTAATAAAAAGGAGCTTCATGGCCTGGGTAATGCTAGTGAGAAGCAAGAAAAACGAAT
AAGAAACAAAGATAGACCTGATCGTGGGGTCTGGGCGCCACGCAGTCGTTCAGATGCCTCAGTCTCACAACTTGATGAATCCTCTGTTTCACAATCTAGTCATTTGCTTT
CTGACTCGGTTGAAGGATACCGTGGCGAAATGAAAGATGATATTCATGGAAGCAGGAGTGGGGATGCAACCACTGTGAGTGGACGTAGCAGTTCAGTGGAGAATGGTTCT
GTTAGACATGGTGGACGTCGTGGGGCTGGCCATGTTATGAAGGATGATGGGTCTTTGAACCCAAATGAAGGGAAGCCATCCAAAAGAGGTGTTGCCGGTGGCCATGAGAA
ACAAGTATGGGTTCAGAAGTCATCTTCAGGTTCTTAACATATTTAAATCATACAATGGCATCCAGACAGGACTATGGTTCCTCAAACTTCCAGGGGGATTGTCTCCATTC
TGAGGACTTAACGCACATCCTCAGAAGGCATCACCATGTAAAATGGAGATATGCCCTGGAAGCAGTTGGTAACAGTAAAATAGGTTTCGTGAACTGGATTGCAAGATTTG
CAATTGTTTCGTCGTATACAGGTGGTAACAAAACACAAAGTTGTCTGGTTGAAGACCGAATATGCATTCTATGGATTTTTGGTTTTACGAAATCGAAGTTTCTTTGGTTG
AAGACCAAATATGGTTGTGGATTTTGGTTTGGTATGATCTGATTTTTTGCCCAACATACCAAGTGTGACTGCTTCACCTGGAGGAACGTGTGCCGGTATATACATACGTG
GCTCGAGTGACGAGAGATCAAAGCCAAGAGGGAGGTTGCCAACCTTCCCTTTGCTTGATGTTTTGGTCATATGCCAAGTGTTTTTTTTTTCCCTTAGAAGCTGAATGTAG
AAAGTACTTTACTTACCATAATCTCACTGGGGGTGGTTGGTTTGGTACAGAATTGTACTTGATTCCATGCGTGGGGCAGTGAATCAGAAACATCAAAGTTTATACTATTT
CATATCGTACATGAGAAATGTGATGATGGATTATGATATGCCTTTCTGTCTACTAATATATAACAGTTTTTATTTA
Protein sequenceShow/hide protein sequence
MKDPLERTKVVIRHLPPSLPHSDLFHHIDDRFAGRYNWCYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPRSSTKKDGREG
TIYKDPDYLEFLKIIAKPAEHLPSAEIQLERKEAEQSGVAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKRGMEKKKYILKDSVKNTNRRD
KSNFILVPRREDQSATSSGIGISDAGTADSGKKKILLLKGKERDISHIADGMLQLQSTTSSGNSPASATKQNQRREAGGSMIRSILLNNEARHGQISSAGQSHQKIQILN
SDNGKRPPRPINARSGSNDMSINEPNPSGSEGDGKRATESKFNKKELHGLGNASEKQEKRIRNKDRPDRGVWAPRSRSDASVSQLDESSVSQSSHLLSDSVEGYRGEMKD
DIHGSRSGDATTVSGRSSSVENGSVRHGGRRGAGHVMKDDGSLNPNEGKPSKRGVAGGHEKQVWVQKSSSGS