; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0003288 (gene) of Snake gourd v1 genome

Gene IDTan0003288
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionRibosomal RNA processing protein 36-like protein
Genome locationLG10:61240959..61248478
RNA-Seq ExpressionTan0003288
SyntenyTan0003288
Gene Ontology termsGO:0000462 - maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (biological process)
GO:0000469 - cleavage involved in rRNA processing (biological process)
GO:0005730 - nucleolus (cellular component)
GO:0030686 - 90S preribosome (cellular component)
InterPro domainsIPR009292 - rRNA biogenesis protein RRP36


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004141535.1 ribosomal RNA processing protein 36 homolog [Cucumis sativus]9.4e-11489.64Show/hide
Query:  KKRSTIPSSGKQVMQEESEDLESSSSDDSLDSEEENIERELADVTFEELQRARSDGSHSMYQKTNQEKKGGRANKNRPMEVSSKKPVSRFREVIQAPKNM
        K  S++PSSGKQ+++EESEDLESSSSD+SLDSEEENIERELADVTFEELQRARSDGSHSMYQKT QEKK GRANKNRPMEVSS+KPVSRFREVIQAPKNM
Subjt:  KKRSTIPSSGKQVMQEESEDLESSSSDDSLDSEEENIERELADVTFEELQRARSDGSHSMYQKTNQEKKGGRANKNRPMEVSSKKPVSRFREVIQAPKNM

Query:  VRDPRFESLSGTLDVEGFKKRYGFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQISWIDKQFKSDSTKRVDAAILAKHKKKEREAAKHGKKPFYLKKS
        VRDPRFESLSGTLD +GFKKRY FIYE  LPAEKEELKKQLRKTNDPNV EELKKQ+SWIDKQFKSDSTKRVDAAILAKHKKKEREAAKHGKKPFYLKKS
Subjt:  VRDPRFESLSGTLDVEGFKKRYGFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQISWIDKQFKSDSTKRVDAAILAKHKKKEREAAKHGKKPFYLKKS

Query:  EIRKQRLVEKYNSLKSTGKLDAYMERRRRKNAAKDRRYIPYQRFNMLDEQE
        EIRKQRLVEKY +LKSTGKLDAY+ER+RRKNAAKDRRYIPYQR + LDEQ+
Subjt:  EIRKQRLVEKYNSLKSTGKLDAYMERRRRKNAAKDRRYIPYQRFNMLDEQE

XP_008456647.1 PREDICTED: ribosomal RNA processing protein 36 homolog [Cucumis melo]1.7e-11590.84Show/hide
Query:  KKRSTIPSSGKQVMQEESEDLESSSSDDSLDSEEENIERELADVTFEELQRARSDGSHSMYQKTNQEKKGGRANKNRPMEVSSKKPVSRFREVIQAPKNM
        K  S++PSSGKQ+M+EESEDLESSSSD+SLDSEEENIERELADVTFEELQRARSDGSHSMYQKT QEKKGGRANKNRPMEVSS+KPVSRFREVIQAPK+M
Subjt:  KKRSTIPSSGKQVMQEESEDLESSSSDDSLDSEEENIERELADVTFEELQRARSDGSHSMYQKTNQEKKGGRANKNRPMEVSSKKPVSRFREVIQAPKNM

Query:  VRDPRFESLSGTLDVEGFKKRYGFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQISWIDKQFKSDSTKRVDAAILAKHKKKEREAAKHGKKPFYLKKS
        VRDPRFESLSGTLDV+GFKKRY FIYE NLPAEKEELKKQLRKTNDPNV EELKKQ+SWIDKQFKSDSTKRVDAAILAKHKKKEREAAKHGKKPFYLKKS
Subjt:  VRDPRFESLSGTLDVEGFKKRYGFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQISWIDKQFKSDSTKRVDAAILAKHKKKEREAAKHGKKPFYLKKS

Query:  EIRKQRLVEKYNSLKSTGKLDAYMERRRRKNAAKDRRYIPYQRFNMLDEQE
        EIRKQRLVEKY +LKSTGKLDAY+ER+RRKNAAKDRRYIPYQR + LDEQ+
Subjt:  EIRKQRLVEKYNSLKSTGKLDAYMERRRRKNAAKDRRYIPYQRFNMLDEQE

XP_022973531.1 ribosomal RNA processing protein 36 homolog [Cucurbita maxima]6.7e-11288.93Show/hide
Query:  MKKR-STIPSSGKQVMQEESEDLESSSSDDSLDSEEENIERELADVTFEELQRARSDGSHSMYQKTNQEKKGGRANKNRPMEVSSKKPVSRFREVIQAPK
        MKK  +++PSS KQ+M++E EDLE SSS++SLDSEEENIERELADVTFEELQR RSDGSHSMYQKTNQEKKG RANKNRPMEVSSKKPV RFREVIQAPK
Subjt:  MKKR-STIPSSGKQVMQEESEDLESSSSDDSLDSEEENIERELADVTFEELQRARSDGSHSMYQKTNQEKKGGRANKNRPMEVSSKKPVSRFREVIQAPK

Query:  NMVRDPRFESLSGTLDVEGFKKRYGFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQISWIDKQFKSDSTKRVDAAILAKHKKKEREAAKHGKKPFYLK
        NMVRDPRFESL+G+LDVEGFKKRY FIYENNLPAEKEELKKQLRKTND NVVEELKKQ+SWIDKQFKSDSTKRVDAAILA HKKKEREAAKHGKKPFYLK
Subjt:  NMVRDPRFESLSGTLDVEGFKKRYGFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQISWIDKQFKSDSTKRVDAAILAKHKKKEREAAKHGKKPFYLK

Query:  KSEIRKQRLVEKYNSLKSTGKLDAYMERRRRKNAAKDRRYIPYQRFNMLDEQE
        KSEIRKQRL EKYN+LKSTGKLDAYMERRRRKNAAKDRRYIPYQR +  DEQE
Subjt:  KSEIRKQRLVEKYNSLKSTGKLDAYMERRRRKNAAKDRRYIPYQRFNMLDEQE

XP_023535518.1 ribosomal RNA processing protein 36 homolog [Cucurbita pepo subsp. pepo]1.1e-11188.93Show/hide
Query:  MKKR-STIPSSGKQVMQEESEDLESSSSDDSLDSEEENIERELADVTFEELQRARSDGSHSMYQKTNQEKKGGRANKNRPMEVSSKKPVSRFREVIQAPK
        MKK  S++PSS KQ+M++E EDLE SSS++SLDSEEENIERELADVTFEELQR RSDGSHSMYQKTNQEKKG RANKNRPMEVSSKKPV RFREVIQAPK
Subjt:  MKKR-STIPSSGKQVMQEESEDLESSSSDDSLDSEEENIERELADVTFEELQRARSDGSHSMYQKTNQEKKGGRANKNRPMEVSSKKPVSRFREVIQAPK

Query:  NMVRDPRFESLSGTLDVEGFKKRYGFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQISWIDKQFKSDSTKRVDAAILAKHKKKEREAAKHGKKPFYLK
        +MVRDPRFESL+G+LDVEGFKKRY FIYENNLPAEKEELKKQLRKTND NVVEELKKQ+SWIDKQFKSDSTKRVDAAILA HKKKEREAAKHGKKPFYLK
Subjt:  NMVRDPRFESLSGTLDVEGFKKRYGFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQISWIDKQFKSDSTKRVDAAILAKHKKKEREAAKHGKKPFYLK

Query:  KSEIRKQRLVEKYNSLKSTGKLDAYMERRRRKNAAKDRRYIPYQRFNMLDEQE
        KSEIRKQRL EKYN+LKSTGKLDAYMERRRRKNAAKDRRYIPYQR +  DEQE
Subjt:  KSEIRKQRLVEKYNSLKSTGKLDAYMERRRRKNAAKDRRYIPYQRFNMLDEQE

XP_038889542.1 ribosomal RNA processing protein 36 homolog [Benincasa hispida]1.9e-11490.44Show/hide
Query:  KKRSTIPSSGKQVMQEESEDLESSSSDDSLDSEEENIERELADVTFEELQRARSDGSHSMYQKTNQEKKGGRANKNRPMEVSSKKPVSRFREVIQAPKNM
        K  S++ SSGKQ+M+EESED ESSSSDDSLDSEEENIERELADVTFEELQRARSDGSHSM+QKT QEKKGGRANKNRPMEVSS+KPVSRFREVIQAPKNM
Subjt:  KKRSTIPSSGKQVMQEESEDLESSSSDDSLDSEEENIERELADVTFEELQRARSDGSHSMYQKTNQEKKGGRANKNRPMEVSSKKPVSRFREVIQAPKNM

Query:  VRDPRFESLSGTLDVEGFKKRYGFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQISWIDKQFKSDSTKRVDAAILAKHKKKEREAAKHGKKPFYLKKS
        VRDPRFESLSGTLDV+GFKKRY FIYEN LPAEKEELKKQLRKTNDPNVVEELK Q+SWIDKQFKSDSTKRVDAAILAKHKKKEREAAKHGKKPFYLKKS
Subjt:  VRDPRFESLSGTLDVEGFKKRYGFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQISWIDKQFKSDSTKRVDAAILAKHKKKEREAAKHGKKPFYLKKS

Query:  EIRKQRLVEKYNSLKSTGKLDAYMERRRRKNAAKDRRYIPYQRFNMLDEQE
        EIRKQRL+EKY SLKSTGKLDAY+ERRRRKNAAKDRRYIP+QR + LDEQ+
Subjt:  EIRKQRLVEKYNSLKSTGKLDAYMERRRRKNAAKDRRYIPYQRFNMLDEQE

TrEMBL top hitse value%identityAlignment
A0A0A0KUS3 Uncharacterized protein4.5e-11489.64Show/hide
Query:  KKRSTIPSSGKQVMQEESEDLESSSSDDSLDSEEENIERELADVTFEELQRARSDGSHSMYQKTNQEKKGGRANKNRPMEVSSKKPVSRFREVIQAPKNM
        K  S++PSSGKQ+++EESEDLESSSSD+SLDSEEENIERELADVTFEELQRARSDGSHSMYQKT QEKK GRANKNRPMEVSS+KPVSRFREVIQAPKNM
Subjt:  KKRSTIPSSGKQVMQEESEDLESSSSDDSLDSEEENIERELADVTFEELQRARSDGSHSMYQKTNQEKKGGRANKNRPMEVSSKKPVSRFREVIQAPKNM

Query:  VRDPRFESLSGTLDVEGFKKRYGFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQISWIDKQFKSDSTKRVDAAILAKHKKKEREAAKHGKKPFYLKKS
        VRDPRFESLSGTLD +GFKKRY FIYE  LPAEKEELKKQLRKTNDPNV EELKKQ+SWIDKQFKSDSTKRVDAAILAKHKKKEREAAKHGKKPFYLKKS
Subjt:  VRDPRFESLSGTLDVEGFKKRYGFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQISWIDKQFKSDSTKRVDAAILAKHKKKEREAAKHGKKPFYLKKS

Query:  EIRKQRLVEKYNSLKSTGKLDAYMERRRRKNAAKDRRYIPYQRFNMLDEQE
        EIRKQRLVEKY +LKSTGKLDAY+ER+RRKNAAKDRRYIPYQR + LDEQ+
Subjt:  EIRKQRLVEKYNSLKSTGKLDAYMERRRRKNAAKDRRYIPYQRFNMLDEQE

A0A1S3C3C0 ribosomal RNA processing protein 36 homolog8.3e-11690.84Show/hide
Query:  KKRSTIPSSGKQVMQEESEDLESSSSDDSLDSEEENIERELADVTFEELQRARSDGSHSMYQKTNQEKKGGRANKNRPMEVSSKKPVSRFREVIQAPKNM
        K  S++PSSGKQ+M+EESEDLESSSSD+SLDSEEENIERELADVTFEELQRARSDGSHSMYQKT QEKKGGRANKNRPMEVSS+KPVSRFREVIQAPK+M
Subjt:  KKRSTIPSSGKQVMQEESEDLESSSSDDSLDSEEENIERELADVTFEELQRARSDGSHSMYQKTNQEKKGGRANKNRPMEVSSKKPVSRFREVIQAPKNM

Query:  VRDPRFESLSGTLDVEGFKKRYGFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQISWIDKQFKSDSTKRVDAAILAKHKKKEREAAKHGKKPFYLKKS
        VRDPRFESLSGTLDV+GFKKRY FIYE NLPAEKEELKKQLRKTNDPNV EELKKQ+SWIDKQFKSDSTKRVDAAILAKHKKKEREAAKHGKKPFYLKKS
Subjt:  VRDPRFESLSGTLDVEGFKKRYGFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQISWIDKQFKSDSTKRVDAAILAKHKKKEREAAKHGKKPFYLKKS

Query:  EIRKQRLVEKYNSLKSTGKLDAYMERRRRKNAAKDRRYIPYQRFNMLDEQE
        EIRKQRLVEKY +LKSTGKLDAY+ER+RRKNAAKDRRYIPYQR + LDEQ+
Subjt:  EIRKQRLVEKYNSLKSTGKLDAYMERRRRKNAAKDRRYIPYQRFNMLDEQE

A0A5A7SR00 Ribosomal RNA processing protein 36-like protein8.3e-11690.84Show/hide
Query:  KKRSTIPSSGKQVMQEESEDLESSSSDDSLDSEEENIERELADVTFEELQRARSDGSHSMYQKTNQEKKGGRANKNRPMEVSSKKPVSRFREVIQAPKNM
        K  S++PSSGKQ+M+EESEDLESSSSD+SLDSEEENIERELADVTFEELQRARSDGSHSMYQKT QEKKGGRANKNRPMEVSS+KPVSRFREVIQAPK+M
Subjt:  KKRSTIPSSGKQVMQEESEDLESSSSDDSLDSEEENIERELADVTFEELQRARSDGSHSMYQKTNQEKKGGRANKNRPMEVSSKKPVSRFREVIQAPKNM

Query:  VRDPRFESLSGTLDVEGFKKRYGFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQISWIDKQFKSDSTKRVDAAILAKHKKKEREAAKHGKKPFYLKKS
        VRDPRFESLSGTLDV+GFKKRY FIYE NLPAEKEELKKQLRKTNDPNV EELKKQ+SWIDKQFKSDSTKRVDAAILAKHKKKEREAAKHGKKPFYLKKS
Subjt:  VRDPRFESLSGTLDVEGFKKRYGFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQISWIDKQFKSDSTKRVDAAILAKHKKKEREAAKHGKKPFYLKKS

Query:  EIRKQRLVEKYNSLKSTGKLDAYMERRRRKNAAKDRRYIPYQRFNMLDEQE
        EIRKQRLVEKY +LKSTGKLDAY+ER+RRKNAAKDRRYIPYQR + LDEQ+
Subjt:  EIRKQRLVEKYNSLKSTGKLDAYMERRRRKNAAKDRRYIPYQRFNMLDEQE

A0A6J1CKR1 ribosomal RNA processing protein 36 homolog7.3e-11291.27Show/hide
Query:  MKKRSTIPSSGKQVMQEESEDLESSSSDDSLDSEEENIERELADVTFEELQRARSDGSHSMYQKTNQEKKGGRANKNRPMEVSSKKPVSRFREVIQAPKN
        MKKRS   SS KQVM EESEDLESSS +D +DSEEENIERELADVTFEELQRARSDGSHS YQKTNQEKKGGRANKNRPMEVSSKKPVSRFREVIQAPKN
Subjt:  MKKRSTIPSSGKQVMQEESEDLESSSSDDSLDSEEENIERELADVTFEELQRARSDGSHSMYQKTNQEKKGGRANKNRPMEVSSKKPVSRFREVIQAPKN

Query:  MVRDPRFESLSGTLDVEGFKKRYGFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQISWIDKQFKSDSTKRVDAAILAKHKKKEREAAKHGKKPFYLKK
        MVRDPRFESLSGTLDVEGFKKRY FIYENNLPAEKEELKKQLRKTNDPNVVEELKKQI WIDKQFKSD+TKRVDAAILAKHK KEREAAK GKKPFYLKK
Subjt:  MVRDPRFESLSGTLDVEGFKKRYGFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQISWIDKQFKSDSTKRVDAAILAKHKKKEREAAKHGKKPFYLKK

Query:  SEIRKQRLVEKYNSLKSTGKLDAYMERRRRKNAAKDRRYIPYQRFNMLDEQE
        SEIRKQRL+EKYN+LKSTGKLDAYMERRRRKNAAKDRRY+PY R + LDEQE
Subjt:  SEIRKQRLVEKYNSLKSTGKLDAYMERRRRKNAAKDRRYIPYQRFNMLDEQE

A0A6J1I8W9 ribosomal RNA processing protein 36 homolog3.3e-11288.93Show/hide
Query:  MKKR-STIPSSGKQVMQEESEDLESSSSDDSLDSEEENIERELADVTFEELQRARSDGSHSMYQKTNQEKKGGRANKNRPMEVSSKKPVSRFREVIQAPK
        MKK  +++PSS KQ+M++E EDLE SSS++SLDSEEENIERELADVTFEELQR RSDGSHSMYQKTNQEKKG RANKNRPMEVSSKKPV RFREVIQAPK
Subjt:  MKKR-STIPSSGKQVMQEESEDLESSSSDDSLDSEEENIERELADVTFEELQRARSDGSHSMYQKTNQEKKGGRANKNRPMEVSSKKPVSRFREVIQAPK

Query:  NMVRDPRFESLSGTLDVEGFKKRYGFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQISWIDKQFKSDSTKRVDAAILAKHKKKEREAAKHGKKPFYLK
        NMVRDPRFESL+G+LDVEGFKKRY FIYENNLPAEKEELKKQLRKTND NVVEELKKQ+SWIDKQFKSDSTKRVDAAILA HKKKEREAAKHGKKPFYLK
Subjt:  NMVRDPRFESLSGTLDVEGFKKRYGFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQISWIDKQFKSDSTKRVDAAILAKHKKKEREAAKHGKKPFYLK

Query:  KSEIRKQRLVEKYNSLKSTGKLDAYMERRRRKNAAKDRRYIPYQRFNMLDEQE
        KSEIRKQRL EKYN+LKSTGKLDAYMERRRRKNAAKDRRYIPYQR +  DEQE
Subjt:  KSEIRKQRLVEKYNSLKSTGKLDAYMERRRRKNAAKDRRYIPYQRFNMLDEQE

SwissProt top hitse value%identityAlignment
A6RKG5 rRNA biogenesis protein rrp361.9e-2434.54Show/hide
Query:  SEDLESSSSDDSLDSEEENIERELADVTFEELQRAR------SDGSHSMYQKTN---------QEKKGG--------RANKNRPMEVSSKKPVSRFREVI
        S++      D+ L   EE      A ++F  L +A+      S       +K+N          E+K G        R++KN P EVSSKK VSR REV+
Subjt:  SEDLESSSSDDSLDSEEENIERELADVTFEELQRAR------SDGSHSMYQKTN---------QEKKGG--------RANKNRPMEVSSKKPVSRFREVI

Query:  QAPKNMVRDPRFESLSGTLDVEGFKKRYGFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQISWIDKQFKSDSTKRVDAAILAKHKKKEREAAKHGKKP
           K  +RDPRFE  +G +D++  +K Y F+ +     E ++LK+ +RKT D +  E+LK+++  ++ + K+D+ KR    +L KH+K+E+E  K GK P
Subjt:  QAPKNMVRDPRFESLSGTLDVEGFKKRYGFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQISWIDKQFKSDSTKRVDAAILAKHKKKEREAAKHGKKP

Query:  FYLKKSEIRKQRLVEKYNSLKSTGKLDAYMERRRRKNAAKDRRYIPYQR
        +YLKK+E +K+ L++ +  LK   +LD  +ERRR+K   K+++ +P  R
Subjt:  FYLKKSEIRKQRLVEKYNSLKSTGKLDAYMERRRRKNAAKDRRYIPYQR

A7E4K0 rRNA biogenesis protein rrp365.5e-2432.35Show/hide
Query:  KRSTIPSSGKQVMQEESEDLESSS-------SDDSLDSEEENIERELADVTFEELQRARSDGSHSMYQKTNQEKKGG-----------------------
        + S+  S+  ++ ++++E+ ESSS        +++ +SEEE      A ++F  L +A++  S    + + + KK                         
Subjt:  KRSTIPSSGKQVMQEESEDLESSS-------SDDSLDSEEENIERELADVTFEELQRARSDGSHSMYQKTNQEKKGG-----------------------

Query:  RANKNRPMEVSSKKPVSRFREVIQAPKNMVRDPRFESLSGTLDVEGFKKRYGFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQISWIDKQFKSDSTKR
        R++KN P E+SSKK VSR REV+   K  +RDPRF+   G +D+   +K Y F+ +     E ++L+K ++KT D +  E+LK+ +  ++ + K+D+ KR
Subjt:  RANKNRPMEVSSKKPVSRFREVIQAPKNMVRDPRFESLSGTLDVEGFKKRYGFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQISWIDKQFKSDSTKR

Query:  VDAAILAKHKKKEREAAKHGKKPFYLKKSEIRKQRLVEKYNSLKSTGKLDAYMERRRRKNAAKDRRYIPYQR
            IL KH+K+E+E  K GK P+YLKK+E +K+ L++ Y  LK   +LD  +ERRR+K   K+++ +P  R
Subjt:  VDAAILAKHKKKEREAAKHGKKPFYLKKSEIRKQRLVEKYNSLKSTGKLDAYMERRRRKNAAKDRRYIPYQR

A7SL20 Ribosomal RNA processing protein 36 homolog1.2e-2636.97Show/hide
Query:  ESEDLESSSSDDSLDSEEENIERELADVTFEELQRARSDGSHSMYQKT----NQEKKGG------RANKNR-PMEVSSKKPVSRFREVIQAPKNMVRDPR
        +S D ES + D S + E E+++ EL+ + F ELQ  +       Y        +E+  G      +  KN+ P E+SSK+ V + R+V+Q  K M RDPR
Subjt:  ESEDLESSSSDDSLDSEEENIERELADVTFEELQRARSDGSHSMYQKT----NQEKKGG------RANKNR-PMEVSSKKPVSRFREVIQAPKNMVRDPR

Query:  FESLSGTLDVEGFKKRYGFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQISWIDKQFKSDSTKRVDAAILAKHKKKEREAAKHGKKPFYLKKSEIRKQ
        F+ LSG  + + F+K Y F+ +  +  EK+ ++K+L+KT +    + L   +  +++Q +S  +         K K+ ERE  + GKKPFYL+KSE++K 
Subjt:  FESLSGTLDVEGFKKRYGFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQISWIDKQFKSDSTKRVDAAILAKHKKKEREAAKHGKKPFYLKKSEIRKQ

Query:  RLVEKYNSLKSTGKLDAYMERRRRKNAAKDRRYIPYQR
         L EKY  LKS GKL  Y+ +RR+K A+KDRR++P +R
Subjt:  RLVEKYNSLKSTGKLDAYMERRRRKNAAKDRRYIPYQR

B6K8A0 rRNA biogenesis protein rrp368.5e-2533.07Show/hide
Query:  KQVMQE-ESEDLESSSSDDSLDSEEENIERELADVTFEELQRARSDGSHSMYQKTNQEKKGGRANKNR-----------------------PMEVSSKKP
        + VM E ES D  +  S++  D   E+ +R+L  + F EL  A+        + T  +K G + +KNR                       P+E+SSK+ 
Subjt:  KQVMQE-ESEDLESSSSDDSLDSEEENIERELADVTFEELQRARSDGSHSMYQKTNQEKKGGRANKNR-----------------------PMEVSSKKP

Query:  VSRFREVIQAPKNMVRDPRFESLSGTLDVEGFKKRYGFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQISWIDKQFKSDSTKRVDAAILAKHKKKERE
        V RFREV+  PK + RDPRF++LSG L+V+  K  YGF+ E  L +E ++L+++L+   +    E +K+ +  +  + +        A +L +H++ E+E
Subjt:  VSRFREVIQAPKNMVRDPRFESLSGTLDVEGFKKRYGFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQISWIDKQFKSDSTKRVDAAILAKHKKKERE

Query:  AAKHGKKPFYLKKSEIRKQRLVEKYNSLKSTGKLDAYMERRRRKNAAKDRRYIPYQR
          + GKKPFYLKKSE +K   ++KY S++ T  LD YME+++++ A K+++ +P  R
Subjt:  AAKHGKKPFYLKKSEIRKQRLVEKYNSLKSTGKLDAYMERRRRKNAAKDRRYIPYQR

C7YTL6 rRNA biogenesis protein RRP366.1e-2333.6Show/hide
Query:  EESEDLESSSSDDSLDSEEENIER----ELADVTFEELQRAR----SDGSHSMYQKTNQEK-------------------KGGRANKNRPMEVSSKKPVS
        +E ED E S S++  + E E  E+    +L+ ++F  L +A+    S    S   KT  E                    K  R++K+ P E +SKKPVS
Subjt:  EESEDLESSSSDDSLDSEEENIER----ELADVTFEELQRAR----SDGSHSMYQKTNQEK-------------------KGGRANKNRPMEVSSKKPVS

Query:  RFREVIQAPKNMVRDPRFESLSGTLDVEGFKKRYGFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQISWIDKQFKSDSTKRVDAAILAKHKKKEREAA
        R RE++   +   RDPRF+ L G +D E   K Y F+ E     E  +L+ Q++KT D    E++K+Q+  ++ + K+   K  +  +L +H+KKE+E  
Subjt:  RFREVIQAPKNMVRDPRFESLSGTLDVEGFKKRYGFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQISWIDKQFKSDSTKRVDAAILAKHKKKEREAA

Query:  KHGKKPFYLKKSEIRKQRLVEKYNSLKSTGKLDAYMERRRRKNAAKDRRYIPY
          GK PFYLK+SE +KQ LV++Y  + S G++D  +ER+R+K A K+++ + +
Subjt:  KHGKKPFYLKKSEIRKQRLVEKYNSLKSTGKLDAYMERRRRKNAAKDRRYIPY

Arabidopsis top hitse value%identityAlignment
AT1G12650.1 unknown protein7.0e-6759.41Show/hide
Query:  SSGKQVMQEESEDLESSSSDDSLDSEEENIERELADVTFEELQRARSDGSHSMYQKTNQEKKGG--RANKNRPMEVSSKKPVSRFREVIQAPKNMVRDPR
        SS K V ++  ED + S S  S   EEE  E+EL   TFEE+ + R+DGS ++  K NQ KK G  RANKNRPMEVSSKKPVSR+REV+  PK  VRDPR
Subjt:  SSGKQVMQEESEDLESSSSDDSLDSEEENIERELADVTFEELQRARSDGSHSMYQKTNQEKKGG--RANKNRPMEVSSKKPVSRFREVIQAPKNMVRDPR

Query:  FESLSGTLDVEGFKKRYGFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQISWIDKQFKSD-STKRVDAAILAKHKKKEREAAKHGKKPFYLKKSEIRK
        F  L GTLDVEGF+KRY F +E+ LP E+EELKK+L+KT +P  ++ELK Q+++++K  K + ST+   AAIL +HKKKEREAAK GK+P+YLKKSEIRK
Subjt:  FESLSGTLDVEGFKKRYGFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQISWIDKQFKSD-STKRVDAAILAKHKKKEREAAKHGKKPFYLKKSEIRK

Query:  QRLVEKYNSLKSTGKLDAYMERRRRKNAAKDRRYIPYQR
        Q L+EKYNSLK +GKL +Y+++RR+KNA KD R++PY+R
Subjt:  QRLVEKYNSLKSTGKLDAYMERRRRKNAAKDRRYIPYQR

AT1G12650.2 unknown protein7.0e-6759.41Show/hide
Query:  SSGKQVMQEESEDLESSSSDDSLDSEEENIERELADVTFEELQRARSDGSHSMYQKTNQEKKGG--RANKNRPMEVSSKKPVSRFREVIQAPKNMVRDPR
        SS K V ++  ED + S S  S   EEE  E+EL   TFEE+ + R+DGS ++  K NQ KK G  RANKNRPMEVSSKKPVSR+REV+  PK  VRDPR
Subjt:  SSGKQVMQEESEDLESSSSDDSLDSEEENIERELADVTFEELQRARSDGSHSMYQKTNQEKKGG--RANKNRPMEVSSKKPVSRFREVIQAPKNMVRDPR

Query:  FESLSGTLDVEGFKKRYGFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQISWIDKQFKSD-STKRVDAAILAKHKKKEREAAKHGKKPFYLKKSEIRK
        F  L GTLDVEGF+KRY F +E+ LP E+EELKK+L+KT +P  ++ELK Q+++++K  K + ST+   AAIL +HKKKEREAAK GK+P+YLKKSEIRK
Subjt:  FESLSGTLDVEGFKKRYGFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQISWIDKQFKSD-STKRVDAAILAKHKKKEREAAKHGKKPFYLKKSEIRK

Query:  QRLVEKYNSLKSTGKLDAYMERRRRKNAAKDRRYIPYQR
        Q L+EKYNSLK +GKL +Y+++RR+KNA KD R++PY+R
Subjt:  QRLVEKYNSLKSTGKLDAYMERRRRKNAAKDRRYIPYQR

AT1G12650.3 unknown protein7.0e-6759.41Show/hide
Query:  SSGKQVMQEESEDLESSSSDDSLDSEEENIERELADVTFEELQRARSDGSHSMYQKTNQEKKGG--RANKNRPMEVSSKKPVSRFREVIQAPKNMVRDPR
        SS K V ++  ED + S S  S   EEE  E+EL   TFEE+ + R+DGS ++  K NQ KK G  RANKNRPMEVSSKKPVSR+REV+  PK  VRDPR
Subjt:  SSGKQVMQEESEDLESSSSDDSLDSEEENIERELADVTFEELQRARSDGSHSMYQKTNQEKKGG--RANKNRPMEVSSKKPVSRFREVIQAPKNMVRDPR

Query:  FESLSGTLDVEGFKKRYGFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQISWIDKQFKSD-STKRVDAAILAKHKKKEREAAKHGKKPFYLKKSEIRK
        F  L GTLDVEGF+KRY F +E+ LP E+EELKK+L+KT +P  ++ELK Q+++++K  K + ST+   AAIL +HKKKEREAAK GK+P+YLKKSEIRK
Subjt:  FESLSGTLDVEGFKKRYGFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQISWIDKQFKSD-STKRVDAAILAKHKKKEREAAKHGKKPFYLKKSEIRK

Query:  QRLVEKYNSLKSTGKLDAYMERRRRKNAAKDRRYIPYQR
        Q L+EKYNSLK +GKL +Y+++RR+KNA KD R++PY+R
Subjt:  QRLVEKYNSLKSTGKLDAYMERRRRKNAAKDRRYIPYQR

AT1G12650.4 unknown protein7.0e-6759.41Show/hide
Query:  SSGKQVMQEESEDLESSSSDDSLDSEEENIERELADVTFEELQRARSDGSHSMYQKTNQEKKGG--RANKNRPMEVSSKKPVSRFREVIQAPKNMVRDPR
        SS K V ++  ED + S S  S   EEE  E+EL   TFEE+ + R+DGS ++  K NQ KK G  RANKNRPMEVSSKKPVSR+REV+  PK  VRDPR
Subjt:  SSGKQVMQEESEDLESSSSDDSLDSEEENIERELADVTFEELQRARSDGSHSMYQKTNQEKKGG--RANKNRPMEVSSKKPVSRFREVIQAPKNMVRDPR

Query:  FESLSGTLDVEGFKKRYGFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQISWIDKQFKSD-STKRVDAAILAKHKKKEREAAKHGKKPFYLKKSEIRK
        F  L GTLDVEGF+KRY F +E+ LP E+EELKK+L+KT +P  ++ELK Q+++++K  K + ST+   AAIL +HKKKEREAAK GK+P+YLKKSEIRK
Subjt:  FESLSGTLDVEGFKKRYGFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQISWIDKQFKSD-STKRVDAAILAKHKKKEREAAKHGKKPFYLKKSEIRK

Query:  QRLVEKYNSLKSTGKLDAYMERRRRKNAAKDRRYIPYQR
        Q L+EKYNSLK +GKL +Y+++RR+KNA KD R++PY+R
Subjt:  QRLVEKYNSLKSTGKLDAYMERRRRKNAAKDRRYIPYQR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAGCGTAGTACAATTCCTAGCTCTGGCAAACAAGTGATGCAGGAAGAAAGTGAAGATCTTGAATCTTCTTCCTCAGACGATTCTCTTGACTCGGAAGAAGAAAA
TATAGAGCGTGAACTTGCAGATGTTACTTTTGAAGAATTGCAGAGAGCACGGTCTGATGGATCACATTCAATGTACCAAAAGACCAACCAAGAGAAGAAAGGTGGGCGGG
CAAACAAGAACAGGCCAATGGAGGTTAGCAGCAAAAAACCAGTTAGTAGGTTTAGAGAGGTCATTCAGGCTCCTAAAAATATGGTACGTGATCCACGCTTCGAATCTTTG
TCGGGTACTCTTGATGTTGAGGGATTTAAGAAGAGATATGGTTTCATTTATGAGAATAATCTTCCGGCTGAAAAGGAGGAACTGAAAAAGCAGTTAAGGAAAACCAATGA
TCCAAATGTTGTTGAAGAACTCAAAAAACAAATATCTTGGATTGACAAGCAATTCAAATCTGACTCCACAAAACGTGTTGATGCTGCAATTCTAGCCAAACATAAGAAGA
AAGAGAGAGAAGCAGCAAAACATGGGAAAAAGCCCTTCTATCTTAAGAAATCTGAAATTCGAAAGCAAAGGCTTGTTGAAAAATACAACTCCCTCAAGTCCACTGGGAAG
CTTGATGCTTATATGGAAAGGAGGCGGAGGAAAAATGCTGCAAAGGATCGTAGATACATACCATATCAAAGGTTTAATATGCTTGATGAACAAGAGTGA
mRNA sequenceShow/hide mRNA sequence
GGTTGATAGACATTTATCTTTTGGCGCACGCGAAACGAGGCCTCCTTCTCCTTTCTCCTTCTCCCTTCAGCCGCACGAGCAGCTCTCCATTAAGAAGCTCCAGCCGGCGA
AGGAGTCACGGCAACGCCTCAGTCCAGCCGAACAGCCACCGCCCTCAGCCTTCGCGAGTTGCAGCGCTGACTCCTCCCTGCGCCGCCCTGTTGTTCGCTTGTGCAAGCCG
TCGATCGTCTGCCGCCGGCCAGACGATTCCGTTCGCCAGCCGCCTCGAGTCAAAGCAAAGGCTCACCCTTCTCTCTCGTCTTCCAGCCGCGACCAGCATCCGTGAGCGCC
CTGCACCGCCGTTCGAGCAGCCCCGTCGGCCGAAGCCCCTCAACGCCGTTGCCGTCTGCCGCCATTATGCTGCCGCCTGAGGTTAGCTGAGACTGAAGTCGCGGCCAGGG
ACCGAACGTGGTGCAGAGACGAGAGTTAAGCATTGGAACGAGCTAAGCATTGGAACGAGCTAAGGAGTGTTCAGCATACACACTGAATTTGAGGCTCTTCAAAGAGGTGC
ATATCCTAAGGACTAGGACTAAAGTGTTGGTTTGGAATCTAAGTTAAGGACTGGAATGAAGAAGCGTAGTACAATTCCTAGCTCTGGCAAACAAGTGATGCAGGAAGAAA
GTGAAGATCTTGAATCTTCTTCCTCAGACGATTCTCTTGACTCGGAAGAAGAAAATATAGAGCGTGAACTTGCAGATGTTACTTTTGAAGAATTGCAGAGAGCACGGTCT
GATGGATCACATTCAATGTACCAAAAGACCAACCAAGAGAAGAAAGGTGGGCGGGCAAACAAGAACAGGCCAATGGAGGTTAGCAGCAAAAAACCAGTTAGTAGGTTTAG
AGAGGTCATTCAGGCTCCTAAAAATATGGTACGTGATCCACGCTTCGAATCTTTGTCGGGTACTCTTGATGTTGAGGGATTTAAGAAGAGATATGGTTTCATTTATGAGA
ATAATCTTCCGGCTGAAAAGGAGGAACTGAAAAAGCAGTTAAGGAAAACCAATGATCCAAATGTTGTTGAAGAACTCAAAAAACAAATATCTTGGATTGACAAGCAATTC
AAATCTGACTCCACAAAACGTGTTGATGCTGCAATTCTAGCCAAACATAAGAAGAAAGAGAGAGAAGCAGCAAAACATGGGAAAAAGCCCTTCTATCTTAAGAAATCTGA
AATTCGAAAGCAAAGGCTTGTTGAAAAATACAACTCCCTCAAGTCCACTGGGAAGCTTGATGCTTATATGGAAAGGAGGCGGAGGAAAAATGCTGCAAAGGATCGTAGAT
ACATACCATATCAAAGGTTTAATATGCTTGATGAACAAGAGTGAAGTTAAAACGGGTATTCTCTTGCTTTCTTCCTAGGAGATTCATGTTCCATATTTTTAGAACTTAGA
GAAAAAAAAAGGGCCATAATCAAGATCTTTACTTTTTCTTTCTTGGGGTTTAGAAGCAGGATAGAGATGCTTTTTAATTTGTTGAATGTCATGTATTGCTTGATGTGTAA
ATCCTATATTAGATTCTAAATTTTCCTCTTTGGAAGGGTCATCATTTATTTTCCTTATCTATCATATGTAATATTAGATATTTAATGGAACTTATTGCCTTCTTTTAGCT
GCAATTTTTATATCATTTGCATATCATACTATCGACTTTTTGAATGAAATGTGGGGATTGAGTTAA
Protein sequenceShow/hide protein sequence
MKKRSTIPSSGKQVMQEESEDLESSSSDDSLDSEEENIERELADVTFEELQRARSDGSHSMYQKTNQEKKGGRANKNRPMEVSSKKPVSRFREVIQAPKNMVRDPRFESL
SGTLDVEGFKKRYGFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQISWIDKQFKSDSTKRVDAAILAKHKKKEREAAKHGKKPFYLKKSEIRKQRLVEKYNSLKSTGK
LDAYMERRRRKNAAKDRRYIPYQRFNMLDEQE