CuGenDBv2

Gene ID	Tan0003289
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Unknown protein
Genome location	LG01:33702769..33703480
RNA-Seq Expression	Tan0003289
Synteny	Tan0003289
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6583459.1 hypothetical protein SDJN03_19391, partial [Cucurbita argyrosperma subsp. sororia]

2.9e-61

92.59

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Query:  MTQMLTFLFCLSSFTFLSIARAEGRAPHGLVYENPVAFSPMAYDFFHPSTQNPSAKDPCGASKCSPLPLAAQVQSTPAQESKYSTT-QKGQHRVGAGGIL
        MTQMLTFLFCLSSFTFLSIA+AEGRAPHGLVYE+PVAFSPMAYDFFHPSTQ P+AKDPCGASKCSPLPLAAQVQSTPA+ESKYSTT QKG HRVGAGGIL
Subjt:  MTQMLTFLFCLSSFTFLSIARAEGRAPHGLVYENPVAFSPMAYDFFHPSTQNPSAKDPCGASKCSPLPLAAQVQSTPAQESKYSTT-QKGQHRVGAGGIL

Query:  GIAFGITFAVFLAMGVYYVLRTRQANANRAMSAKP
        GI FGITFAV LAMGVYYVLRTRQANANRAMSA+P
Subjt:  GIAFGITFAVFLAMGVYYVLRTRQANANRAMSAKP

KAG7019217.1 hypothetical protein SDJN02_18175, partial [Cucurbita argyrosperma subsp. argyrosperma]

5.9e-62

93.33

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Query:  MTQMLTFLFCLSSFTFLSIARAEGRAPHGLVYENPVAFSPMAYDFFHPSTQNPSAKDPCGASKCSPLPLAAQVQSTPAQESKYSTT-QKGQHRVGAGGIL
        MTQMLTFLFCLSSFTFLSIA+AEGRAPHGLVYE+PVAFSPMAYDFFHPSTQ P+AKDPCGASKCSPLPLAAQVQSTPA+ESKYSTT QKG HRVGAGGIL
Subjt:  MTQMLTFLFCLSSFTFLSIARAEGRAPHGLVYENPVAFSPMAYDFFHPSTQNPSAKDPCGASKCSPLPLAAQVQSTPAQESKYSTT-QKGQHRVGAGGIL

Query:  GIAFGITFAVFLAMGVYYVLRTRQANANRAMSAKP
        GI FGITFAVFLAMGVYYVLRTRQANANRAMSA+P
Subjt:  GIAFGITFAVFLAMGVYYVLRTRQANANRAMSAKP

XP_008457527.1 PREDICTED: uncharacterized protein LOC103497198 [Cucumis melo]

4.7e-59

90.23

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Query:  MTQMLTFLFCLSSFTFLSIARAEGRAPHGLVYENPVAFSPMAYDFFHPSTQNPSAKDPCGASKCSPLPLAAQVQSTPAQESKYSTT-QKGQHRVGAGGIL
        MT+MLTFLFCLSSFTFLS+ARA+GRAPHGLVYE+PVAFSPMAYDFFHPSTQNP+ KDPCG SKCSPLPLAAQVQSTPA+ESKYSTT Q  +HRVGAGGIL
Subjt:  MTQMLTFLFCLSSFTFLSIARAEGRAPHGLVYENPVAFSPMAYDFFHPSTQNPSAKDPCGASKCSPLPLAAQVQSTPAQESKYSTT-QKGQHRVGAGGIL

Query:  GIAFGITFAVFLAMGVYYVLRTRQANANRAMSA
        GI FGITFAVFLAMGVYYVLRTRQANANRAMSA
Subjt:  GIAFGITFAVFLAMGVYYVLRTRQANANRAMSA

XP_011657962.2 uncharacterized protein LOC105435923 [Cucumis sativus]

3.9e-58

89.47

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Query:  MTQMLTFLFCLSSFTFLSIARAEGRAPHGLVYENPVAFSPMAYDFFHPSTQNPSAKDPCGASKCSPLPLAAQVQSTPAQESKYSTT-QKGQHRVGAGGIL
        MT+MLTFLFCL+SFTFLSIA+A+GRAPHGLVYE+PVAFSPMAYDFFHPSTQNPS KDPCG SKCSPLPLAAQVQSTPA+ESKYSTT Q   HRVGAGGIL
Subjt:  MTQMLTFLFCLSSFTFLSIARAEGRAPHGLVYENPVAFSPMAYDFFHPSTQNPSAKDPCGASKCSPLPLAAQVQSTPAQESKYSTT-QKGQHRVGAGGIL

Query:  GIAFGITFAVFLAMGVYYVLRTRQANANRAMSA
        GI FGITFAVFL MGVYYVLRTRQANANRAMSA
Subjt:  GIAFGITFAVFLAMGVYYVLRTRQANANRAMSA

XP_038876402.1 uncharacterized protein LOC120068840 [Benincasa hispida]

2.0e-57

90.08

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Query:  MTQMLTFLFCLSSFTFLSIARAEGRAPHGLVYENPVAFSPMAYDFFHPSTQNPSAKDPCGASKCSPLPLAAQVQSTPAQESKYSTT-QKGQHRVGAGGIL
        MT+MLTFLFCL+SFTFLSIARA+GRAPHGLVYE+PVAFSPMAYDFFHPSTQNP+ KD CG SKCSPLPLAAQVQSTPAQESKYSTT QKG HRVGAGGIL
Subjt:  MTQMLTFLFCLSSFTFLSIARAEGRAPHGLVYENPVAFSPMAYDFFHPSTQNPSAKDPCGASKCSPLPLAAQVQSTPAQESKYSTT-QKGQHRVGAGGIL

Query:  GIAFGITFAVFLAMGVYYVLRTRQANANRAM
        GI FGITFAVFLAMGVYYVL TRQANANRA+
Subjt:  GIAFGITFAVFLAMGVYYVLRTRQANANRAM

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LV85 Uncharacterized protein

6.6e-59

90.23

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Query:  MTQMLTFLFCLSSFTFLSIARAEGRAPHGLVYENPVAFSPMAYDFFHPSTQNPSAKDPCGASKCSPLPLAAQVQSTPAQESKYSTT-QKGQHRVGAGGIL
        MT+MLTFLFCL+SFTFLSIARA+GRAPHGLVYE+PVAFSPMAYDFFHPSTQNPS KDPCG SKCSPLPLAAQVQSTPA+ESKYSTT Q   HRVGAGGIL
Subjt:  MTQMLTFLFCLSSFTFLSIARAEGRAPHGLVYENPVAFSPMAYDFFHPSTQNPSAKDPCGASKCSPLPLAAQVQSTPAQESKYSTT-QKGQHRVGAGGIL

Query:  GIAFGITFAVFLAMGVYYVLRTRQANANRAMSA
        GI FGITFAVFL MGVYYVLRTRQANANRAMSA
Subjt:  GIAFGITFAVFLAMGVYYVLRTRQANANRAMSA

A0A1S3C6E2 uncharacterized protein LOC103497198

2.3e-59

90.23

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Query:  MTQMLTFLFCLSSFTFLSIARAEGRAPHGLVYENPVAFSPMAYDFFHPSTQNPSAKDPCGASKCSPLPLAAQVQSTPAQESKYSTT-QKGQHRVGAGGIL
        MT+MLTFLFCLSSFTFLS+ARA+GRAPHGLVYE+PVAFSPMAYDFFHPSTQNP+ KDPCG SKCSPLPLAAQVQSTPA+ESKYSTT Q  +HRVGAGGIL
Subjt:  MTQMLTFLFCLSSFTFLSIARAEGRAPHGLVYENPVAFSPMAYDFFHPSTQNPSAKDPCGASKCSPLPLAAQVQSTPAQESKYSTT-QKGQHRVGAGGIL

Query:  GIAFGITFAVFLAMGVYYVLRTRQANANRAMSA
        GI FGITFAVFLAMGVYYVLRTRQANANRAMSA
Subjt:  GIAFGITFAVFLAMGVYYVLRTRQANANRAMSA

A0A5A7SXJ1 Uncharacterized protein

2.3e-59

90.23

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Query:  MTQMLTFLFCLSSFTFLSIARAEGRAPHGLVYENPVAFSPMAYDFFHPSTQNPSAKDPCGASKCSPLPLAAQVQSTPAQESKYSTT-QKGQHRVGAGGIL
        MT+MLTFLFCLSSFTFLS+ARA+GRAPHGLVYE+PVAFSPMAYDFFHPSTQNP+ KDPCG SKCSPLPLAAQVQSTPA+ESKYSTT Q  +HRVGAGGIL
Subjt:  MTQMLTFLFCLSSFTFLSIARAEGRAPHGLVYENPVAFSPMAYDFFHPSTQNPSAKDPCGASKCSPLPLAAQVQSTPAQESKYSTT-QKGQHRVGAGGIL

Query:  GIAFGITFAVFLAMGVYYVLRTRQANANRAMSA
        GI FGITFAVFLAMGVYYVLRTRQANANRAMSA
Subjt:  GIAFGITFAVFLAMGVYYVLRTRQANANRAMSA

A0A6J1DWP3 uncharacterized protein LOC111025099

1.4e-56

84.67

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Query:  MTQMLTFLFCLSSFTFLSIARAEGRAPHGLVYENPVAFSPMAYDFFHPSTQNPSAKDPCGASKCSPLPLAAQVQSTPAQESKYST-TQKGQHRVGAGGIL
        MTQMLTFLFCLSS TFLS+ARAEGRAPHGLVYE+P+AFSPMAYDFFHPS QN +AKDPC ASKCSPLPLAAQVQSTPAQ+SKYST  QKG+H +GAGG+L
Subjt:  MTQMLTFLFCLSSFTFLSIARAEGRAPHGLVYENPVAFSPMAYDFFHPSTQNPSAKDPCGASKCSPLPLAAQVQSTPAQESKYST-TQKGQHRVGAGGIL

Query:  GIAFGITFAVFLAMGVYYVLRTRQANANRAMSAKPVA
        GI  GI FAVFLAMGVYYVLRTRQANANRAMS +P A
Subjt:  GIAFGITFAVFLAMGVYYVLRTRQANANRAMSAKPVA

A0A6J1GD80 uncharacterized protein LOC111452884

1.8e-53

83.94

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Query:  MTQMLTFLFCLSSFTFLSIARAEGRAPHGLVYENPVAFSPMAYDFFHPSTQNPSAKDPCGASKCSPLPLAAQVQSTPAQESKYS-TTQKGQHRVGAGGIL
        M Q LTFLF LSSF+FLSI RAEGRAPHGLVYENPVAFSPMAYDFFHP T++P+A+DPCGASKCSPLPLAAQ+QS PAQESKYS TTQKG+   G GGIL
Subjt:  MTQMLTFLFCLSSFTFLSIARAEGRAPHGLVYENPVAFSPMAYDFFHPSTQNPSAKDPCGASKCSPLPLAAQVQSTPAQESKYS-TTQKGQHRVGAGGIL

Query:  GIAFGITFAVFLAMGVYYVLRTRQANANRAMSAKPVA
        GI FGITFAVFLAMGVYYVLRTR AN NRAMSAKP A
Subjt:  GIAFGITFAVFLAMGVYYVLRTRQANANRAMSAKPVA

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G28410.1 unknown protein

1.3e-19

46.96

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Query:  MTQMLTFLFCLSSFTFLSIARAEGRAPHGLVYENPVAFSPMAYDFFHPSTQNPSAK-DPCGASKCSPLPLAAQVQ--STPAQESKYSTTQKG-QHRVGAG
        MT     +F  SS    + A A+ RAPHGL YE PVAFSP A+DFFH   +NP    +PC  S CSPLP+AA+VQ  S  AQES   +   G +  +   
Subjt:  MTQMLTFLFCLSSFTFLSIARAEGRAPHGLVYENPVAFSPMAYDFFHPSTQNPSAK-DPCGASKCSPLPLAAQVQ--STPAQESKYSTTQKG-QHRVGAG

Query:  GILGIAFGITFAVFL
        G++GI FG+ FAV +
Subjt:  GILGIAFGITFAVFL

AT5G60650.1 unknown protein

5.7e-15

36.17

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Query:  MTQMLTFLF-CLSSFTFLSIARAEGRAPHGLVYENPVAFSPMAYDFFHPST-----QNPSAKDPCGASKCSPLPLAAQVQSTPAQESK-----YSTTQKG
        +T  L F F CLS    +SIA +  R  HG  Y NP AFSP AYDFFHP +      NP    P   S  SP P    +    +Q SK     ++T++  
Subjt:  MTQMLTFLF-CLSSFTFLSIARAEGRAPHGLVYENPVAFSPMAYDFFHPST-----QNPSAKDPCGASKCSPLPLAAQVQSTPAQESK-----YSTTQKG

Query:  QHRVGAGGILGIAFGITFAVFLAMGVYYVLRTRQANANRAM
        +   G G  +G+  G++F  FL++G+Y+V++ ++AN  R +
Subjt:  QHRVGAGGILGIAFGITFAVFLAMGVYYVLRTRQANANRAM

Sequences

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CDS sequence

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ATGACTCAAATGCTTACTTTCCTGTTCTGTCTCTCTTCCTTCACGTTTCTTTCCATCGCCCGAGCTGAAGGCAGAGCCCCTCATGGCTTGGTATACGAGAACCCCGTCGC
GTTCTCTCCAATGGCATATGATTTCTTCCATCCAAGCACCCAGAATCCCAGTGCCAAAGACCCATGTGGTGCATCCAAATGCTCCCCATTGCCCCTTGCAGCTCAAGTAC
AATCTACTCCTGCACAAGAAAGCAAATACTCCACAACCCAGAAAGGTCAGCACCGTGTCGGGGCTGGTGGGATTCTAGGAATTGCGTTTGGCATCACATTTGCAGTGTTT
TTGGCAATGGGGGTGTACTATGTACTACGTACCCGCCAAGCCAACGCAAACCGAGCTATGTCAGCAAAACCTGTTGCTTGA

mRNA sequence

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CTTACCTCTGCTTCTGCTTCTACTTCAAGGCACTCAGTTGAGGCAAATCGACAAACATGACTCAAATGCTTACTTTCCTGTTCTGTCTCTCTTCCTTCACGTTTCTTTCC
ATCGCCCGAGCTGAAGGCAGAGCCCCTCATGGCTTGGTATACGAGAACCCCGTCGCGTTCTCTCCAATGGCATATGATTTCTTCCATCCAAGCACCCAGAATCCCAGTGC
CAAAGACCCATGTGGTGCATCCAAATGCTCCCCATTGCCCCTTGCAGCTCAAGTACAATCTACTCCTGCACAAGAAAGCAAATACTCCACAACCCAGAAAGGTCAGCACC
GTGTCGGGGCTGGTGGGATTCTAGGAATTGCGTTTGGCATCACATTTGCAGTGTTTTTGGCAATGGGGGTGTACTATGTACTACGTACCCGCCAAGCCAACGCAAACCGA
GCTATGTCAGCAAAACCTGTTGCTTGACATGCTCAAAGCCAATATGTTTACAAGACTAACAAACACTTGGCCACTTCTCTGCCTCTGTTTAGTTTCTTATCCCTTTCTTA
TTTATTTCTCCAACATTGTTAGCGGCTATGGCTATACATATACATTAAGTAGGAGGTTGTTCAGAGATATCATCTAAATTGTGCTCCCTAAAATTTTCTTCTCCATCCCT
CCTCTACCCCCATGTGTAAAATTGAGTTTGTGAAATTTTTGCTCCTTCGAAG

Protein sequence

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MTQMLTFLFCLSSFTFLSIARAEGRAPHGLVYENPVAFSPMAYDFFHPSTQNPSAKDPCGASKCSPLPLAAQVQSTPAQESKYSTTQKGQHRVGAGGILGIAFGITFAVF
LAMGVYYVLRTRQANANRAMSAKPVA

Tan0003289 (gene) of Snake gourd v1 genome