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Tan0003301 (gene) of Snake gourd v1 genome

Gene IDTan0003301
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionDUF4228 domain protein
Genome locationLG01:18228485..18228799
RNA-Seq ExpressionTan0003301
SyntenyTan0003301
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577418.1 hypothetical protein SDJN03_24992, partial [Cucurbita argyrosperma subsp. sororia]3.4e-3375.73Show/hide
Query:  MGNCTSNKYLADTMPMSDDDEEAVEMVKRRLNADDRAPKSSTGTTMELKIRITKRELEKLLSKVDVEELPVTELLSQLIDVGDAFESNHRGSWRPSLQSI
        MGNCTSNKYLA+TMPMS ++EE VE VKR+LNADD A + +T TT E+KIR+TKRELEKLLSKV+VEELPVTELL Q+I+VGD  ES HR SWRPSLQSI
Subjt:  MGNCTSNKYLADTMPMSDDDEEAVEMVKRRLNADDRAPKSSTGTTMELKIRITKRELEKLLSKVDVEELPVTELLSQLIDVGDAFESNHRGSWRPSLQSI

Query:  PEV
        PE+
Subjt:  PEV

XP_008463409.1 PREDICTED: uncharacterized protein LOC103501580 [Cucumis melo]5.5e-3677.88Show/hide
Query:  MGNCTSNKYLADTMPMSDDDEEAVEMVKRRLNADDRAPKSSTGTTMELKIRITKRELEKLLSKVDVEELPVTELLSQLIDVGDAFESNHRGSWRPSLQSI
        MGNCTSNKYLA+TMPMSDD+EE  EM++RRL  + RA K S  TT ELKIRITK+ELEKLL KVD+EELPV ELLS+LIDVGDAFES HR SW+PSLQSI
Subjt:  MGNCTSNKYLADTMPMSDDDEEAVEMVKRRLNADDRAPKSSTGTTMELKIRITKRELEKLLSKVDVEELPVTELLSQLIDVGDAFESNHRGSWRPSLQSI

Query:  PEVN
        PEVN
Subjt:  PEVN

XP_022985276.1 uncharacterized protein LOC111483315 [Cucurbita maxima]2.2e-3275.47Show/hide
Query:  MGNCTSNKYLADTMPMSDDDEEAVEMVKRRLNADDRAPKSSTG---TTMELKIRITKRELEKLLSKVDVEELPVTELLSQLIDVGDAFESNHRGSWRPSL
        MGNCTSNKYLA+TMPMS ++EE VE +KR+LNADD A +SS G   TT E+KIR+TKRELEKLLSKV+VEELPVTELL QLI+VGD  ES HR SWRPSL
Subjt:  MGNCTSNKYLADTMPMSDDDEEAVEMVKRRLNADDRAPKSSTG---TTMELKIRITKRELEKLLSKVDVEELPVTELLSQLIDVGDAFESNHRGSWRPSL

Query:  QSIPEV
        QSIPE+
Subjt:  QSIPEV

XP_031739098.1 uncharacterized protein LOC116402843 [Cucumis sativus]2.3e-3478.1Show/hide
Query:  MGNCTSNKYLADT-MPMSDDDEEAVEMVKRRLNADDRAPKSSTGTTMELKIRITKRELEKLLSKVDVEELPVTELLSQLIDVGDAFESNHRGSWRPSLQS
        MGNCTSNKYLA+T +PMSDDDEE  EM++RRL   + A K S  TT ELKIRITKRELEKLL KVDVEELPVTELLS+LIDVGD FES H+ SWRPSLQS
Subjt:  MGNCTSNKYLADT-MPMSDDDEEAVEMVKRRLNADDRAPKSSTGTTMELKIRITKRELEKLLSKVDVEELPVTELLSQLIDVGDAFESNHRGSWRPSLQS

Query:  IPEVN
        IPEVN
Subjt:  IPEVN

XP_038904231.1 uncharacterized protein LOC120090574 [Benincasa hispida]1.6e-3884.62Show/hide
Query:  MGNCTSNKYLADTMPMSDDDEEAVEMVKRRLNADDRAPKSSTGTTMELKIRITKRELEKLLSKVDVEELPVTELLSQLIDVGDAFESNHRGSWRPSLQSI
        MGNCTSNKYLA+TMPMSD+DEEAVE V+RRL   D A K S  TT ELKIRITKRELEKLLSKVDVEELPVTELLSQLIDVGDAFES H+ SWRPSLQSI
Subjt:  MGNCTSNKYLADTMPMSDDDEEAVEMVKRRLNADDRAPKSSTGTTMELKIRITKRELEKLLSKVDVEELPVTELLSQLIDVGDAFESNHRGSWRPSLQSI

Query:  PEVN
        PEVN
Subjt:  PEVN

TrEMBL top hitse value%identityAlignment
A0A0A0L2D8 Uncharacterized protein1.1e-3478.1Show/hide
Query:  MGNCTSNKYLADT-MPMSDDDEEAVEMVKRRLNADDRAPKSSTGTTMELKIRITKRELEKLLSKVDVEELPVTELLSQLIDVGDAFESNHRGSWRPSLQS
        MGNCTSNKYLA+T +PMSDDDEE  EM++RRL   + A K S  TT ELKIRITKRELEKLL KVDVEELPVTELLS+LIDVGD FES H+ SWRPSLQS
Subjt:  MGNCTSNKYLADT-MPMSDDDEEAVEMVKRRLNADDRAPKSSTGTTMELKIRITKRELEKLLSKVDVEELPVTELLSQLIDVGDAFESNHRGSWRPSLQS

Query:  IPEVN
        IPEVN
Subjt:  IPEVN

A0A1S3CJ77 uncharacterized protein LOC1035015802.7e-3677.88Show/hide
Query:  MGNCTSNKYLADTMPMSDDDEEAVEMVKRRLNADDRAPKSSTGTTMELKIRITKRELEKLLSKVDVEELPVTELLSQLIDVGDAFESNHRGSWRPSLQSI
        MGNCTSNKYLA+TMPMSDD+EE  EM++RRL  + RA K S  TT ELKIRITK+ELEKLL KVD+EELPV ELLS+LIDVGDAFES HR SW+PSLQSI
Subjt:  MGNCTSNKYLADTMPMSDDDEEAVEMVKRRLNADDRAPKSSTGTTMELKIRITKRELEKLLSKVDVEELPVTELLSQLIDVGDAFESNHRGSWRPSLQSI

Query:  PEVN
        PEVN
Subjt:  PEVN

A0A5D3BTQ9 DUF4228 domain protein2.7e-3677.88Show/hide
Query:  MGNCTSNKYLADTMPMSDDDEEAVEMVKRRLNADDRAPKSSTGTTMELKIRITKRELEKLLSKVDVEELPVTELLSQLIDVGDAFESNHRGSWRPSLQSI
        MGNCTSNKYLA+TMPMSDD+EE  EM++RRL  + RA K S  TT ELKIRITK+ELEKLL KVD+EELPV ELLS+LIDVGDAFES HR SW+PSLQSI
Subjt:  MGNCTSNKYLADTMPMSDDDEEAVEMVKRRLNADDRAPKSSTGTTMELKIRITKRELEKLLSKVDVEELPVTELLSQLIDVGDAFESNHRGSWRPSLQSI

Query:  PEVN
        PEVN
Subjt:  PEVN

A0A6J1EVV2 uncharacterized protein LOC1114384721.2e-3174.76Show/hide
Query:  MGNCTSNKYLADTMPMSDDDEEAVEMVKRRLNADDRAPKSSTGTTMELKIRITKRELEKLLSKVDVEELPVTELLSQLIDVGDAFESNHRGSWRPSLQSI
        MGNCTSNKYLA+TMPMS ++EE VE VKR+LNADD A + +  TT E+KIR+TKRELEKLLSKV+VEELPVTELL Q+I+VGD  ES HR SWRPSLQSI
Subjt:  MGNCTSNKYLADTMPMSDDDEEAVEMVKRRLNADDRAPKSSTGTTMELKIRITKRELEKLLSKVDVEELPVTELLSQLIDVGDAFESNHRGSWRPSLQSI

Query:  PEV
        PE+
Subjt:  PEV

A0A6J1J7P7 uncharacterized protein LOC1114833151.1e-3275.47Show/hide
Query:  MGNCTSNKYLADTMPMSDDDEEAVEMVKRRLNADDRAPKSSTG---TTMELKIRITKRELEKLLSKVDVEELPVTELLSQLIDVGDAFESNHRGSWRPSL
        MGNCTSNKYLA+TMPMS ++EE VE +KR+LNADD A +SS G   TT E+KIR+TKRELEKLLSKV+VEELPVTELL QLI+VGD  ES HR SWRPSL
Subjt:  MGNCTSNKYLADTMPMSDDDEEAVEMVKRRLNADDRAPKSSTG---TTMELKIRITKRELEKLLSKVDVEELPVTELLSQLIDVGDAFESNHRGSWRPSL

Query:  QSIPEV
        QSIPE+
Subjt:  QSIPEV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G10120.1 unknown protein6.0e-0431.37Show/hide
Query:  SNKYLADTMP---MSDDDEEAVEMVKRRLNADDRAPKSSTGTTMELKIRITKRELEKLLSKVDVEELPVTELLSQLIDVGDAFESNHRGSWRPSLQSIPE
        S K++  TM     ++ + E  E  + RL       K  T   + +K+ ++K+ELEKLL    V E+    L  Q   + D  +  H+  WRP L SIPE
Subjt:  SNKYLADTMP---MSDDDEEAVEMVKRRLNADDRAPKSSTGTTMELKIRITKRELEKLLSKVDVEELPVTELLSQLIDVGDAFESNHRGSWRPSLQSIPE

Query:  VN
         +
Subjt:  VN

AT3G20340.1 Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress.2.9e-0643.66Show/hide
Query:  RAPKSSTGTTMELKIRITKRELEKLLSKVDVEELPVTE--LLSQLIDVGDAFESNHRGSWRPSLQSIPEVN
        R  KSS   + E+KIR+TK++L  LLSKV+V +L   +      +++     E+N +  WRP LQSIPEVN
Subjt:  RAPKSSTGTTMELKIRITKRELEKLLSKVDVEELPVTE--LLSQLIDVGDAFESNHRGSWRPSLQSIPEVN

AT4G21920.1 unknown protein4.0e-0836.17Show/hide
Query:  DDDEEAVEMVKRRLNADDRAPKSSTGTTMELKIRITKRELEKLLSKVDVEELPVTELLSQLI-DVGDAF------ESNHRGSWRPSLQSIPEVN
        DD+++  +++    N    +  SS+    E+KIRITK+ELE L+  + ++ L   E+LS+LI + GD         +NH   W+P LQSIPE++
Subjt:  DDDEEAVEMVKRRLNADDRAPKSSTGTTMELKIRITKRELEKLLSKVDVEELPVTELLSQLI-DVGDAF------ESNHRGSWRPSLQSIPEVN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAATTGTACGAGCAACAAATATTTGGCTGATACAATGCCAATGAGCGACGACGACGAGGAGGCAGTGGAGATGGTGAAGAGGAGGCTAAATGCCGACGACAGAGC
TCCGAAATCTTCGACGGGGACTACGATGGAGTTGAAGATCAGGATCACAAAAAGAGAGCTGGAGAAGTTATTGAGCAAAGTGGATGTGGAGGAGCTTCCGGTGACGGAGC
TGTTATCGCAATTGATCGACGTCGGCGATGCATTCGAGAGTAATCACCGGGGATCATGGCGGCCTTCTTTGCAAAGCATTCCTGAGGTGAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAAATTGTACGAGCAACAAATATTTGGCTGATACAATGCCAATGAGCGACGACGACGAGGAGGCAGTGGAGATGGTGAAGAGGAGGCTAAATGCCGACGACAGAGC
TCCGAAATCTTCGACGGGGACTACGATGGAGTTGAAGATCAGGATCACAAAAAGAGAGCTGGAGAAGTTATTGAGCAAAGTGGATGTGGAGGAGCTTCCGGTGACGGAGC
TGTTATCGCAATTGATCGACGTCGGCGATGCATTCGAGAGTAATCACCGGGGATCATGGCGGCCTTCTTTGCAAAGCATTCCTGAGGTGAATTGA
Protein sequenceShow/hide protein sequence
MGNCTSNKYLADTMPMSDDDEEAVEMVKRRLNADDRAPKSSTGTTMELKIRITKRELEKLLSKVDVEELPVTELLSQLIDVGDAFESNHRGSWRPSLQSIPEVN