; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0003316 (gene) of Snake gourd v1 genome

Gene IDTan0003316
OrganismTrichosanthes anguina (Snake gourd v1)
Description60S ribosomal protein L36
Genome locationLG01:2054700..2056699
RNA-Seq ExpressionTan0003316
SyntenyTan0003316
Gene Ontology termsGO:0002181 - cytoplasmic translation (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR000509 - Ribosomal protein L36e
IPR038097 - Ribosomal protein L36e domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6574185.1 60S ribosomal protein L36-2, partial [Cucurbita argyrosperma subsp. sororia]2.1e-4998.2Show/hide
Query:  AMAQKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRK
        AMA KQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVR+LIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRK
Subjt:  AMAQKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRK

Query:  MRAGGGGEKKK
        MRAGGGGEKKK
Subjt:  MRAGGGGEKKK

KAG6576718.1 60S ribosomal protein L36-2, partial [Cucurbita argyrosperma subsp. sororia]5.7e-5099.1Show/hide
Query:  AMAQKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRK
        AMA KQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRK
Subjt:  AMAQKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRK

Query:  MRAGGGGEKKK
        MRAGGGGEKKK
Subjt:  MRAGGGGEKKK

KAG7013242.1 60S ribosomal protein L36-2, partial [Cucurbita argyrosperma subsp. argyrosperma]2.1e-4998.2Show/hide
Query:  AMAQKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRK
        AMA KQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVR+LIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRK
Subjt:  AMAQKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRK

Query:  MRAGGGGEKKK
        MRAGGGGEKKK
Subjt:  MRAGGGGEKKK

KAG7014765.1 60S ribosomal protein L36-2, partial [Cucurbita argyrosperma subsp. argyrosperma]5.7e-5099.1Show/hide
Query:  AMAQKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRK
        AMA KQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRK
Subjt:  AMAQKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRK

Query:  MRAGGGGEKKK
        MRAGGGGEKKK
Subjt:  MRAGGGGEKKK

XP_022923053.1 60S ribosomal protein L36-2-like isoform X1 [Cucurbita moschata]2.1e-4999.09Show/hide
Query:  MAQKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM
        MA KQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM
Subjt:  MAQKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM

Query:  RAGGGGEKKK
        RAGGGGEKKK
Subjt:  RAGGGGEKKK

TrEMBL top hitse value%identityAlignment
A0A6J1E5T2 60S ribosomal protein L361.0e-4999.09Show/hide
Query:  MAQKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM
        MA KQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM
Subjt:  MAQKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM

Query:  RAGGGGEKKK
        RAGGGGEKKK
Subjt:  RAGGGGEKKK

A0A6J1H2C5 60S ribosomal protein L364.0e-4998.18Show/hide
Query:  MAQKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM
        MA KQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVR+LIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM
Subjt:  MAQKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM

Query:  RAGGGGEKKK
        RAGGGGEKKK
Subjt:  RAGGGGEKKK

A0A6J1HV53 60S ribosomal protein L361.5e-4897.27Show/hide
Query:  MAQKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM
        MA K PNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVR+LIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM
Subjt:  MAQKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM

Query:  RAGGGGEKKK
        RAGGGGEKKK
Subjt:  RAGGGGEKKK

A0A6J1JC29 60S ribosomal protein L361.0e-4999.09Show/hide
Query:  MAQKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM
        MA KQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM
Subjt:  MAQKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM

Query:  RAGGGGEKKK
        RAGGGGEKKK
Subjt:  RAGGGGEKKK

A0A6J1K6N3 60S ribosomal protein L364.0e-4998.18Show/hide
Query:  MAQKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM
        MA KQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVR+LIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM
Subjt:  MAQKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM

Query:  RAGGGGEKKK
        RAGGGGEKKK
Subjt:  RAGGGGEKKK

SwissProt top hitse value%identityAlignment
O80929 60S ribosomal protein L36-11.6e-3982.86Show/hide
Query:  TGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGG--
        TGLFVGLNKGH+VT++ELAPRP+ RKGK+SKR +F+R LIREVAG APYEKRITELLKVGKDKRALKVAKRKLGTHKRAK+KREEMSSVLRKMR+ GG  
Subjt:  TGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGG--

Query:  -GEKK
          EKK
Subjt:  -GEKK

P52866 60S ribosomal protein L365.0e-3382.42Show/hide
Query:  MAQKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKRE
        MA KQPNTGLFVGLNKGHIVTKKELAPRPSDRKGK+SKR  FVRNLIREVAGF PYEKRITELLKVGKDKRALKV + K+G H +  K+ E
Subjt:  MAQKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKRE

Q9LRB8 60S ribosomal protein L361.7e-2871.88Show/hide
Query:  VGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGGE
        VGLNKGH VTKK   PRPS RKG  S+RV  VR ++REVAG+APYE+R+ ELLKVGKDKRALK+ KRKLGTH R KKKREEM+ VLRKM+A   GE
Subjt:  VGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGGE

Q9LZ57 60S ribosomal protein L36-31.9e-4083.81Show/hide
Query:  TGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGG-
        TGLFVGLNKGH+VTK+E  PRP++RKGK+SKR +F+RNLI+EVAG APYEKRITELLKVGKDKRALKVAKRKLGTHKRAK+KREEMSSVLRKMR+GG G 
Subjt:  TGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGG-

Query:  -EKKK
         EKKK
Subjt:  -EKKK

Q9M352 60S ribosomal protein L36-21.5e-4282.14Show/hide
Query:  MAQKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM
        M   Q  TGLFVGLNKGH+VT++ELAPRP  RKGK+SKR +F+RNLI+EVAG APYEKRITELLKVGKDKRALKVAKRKLGTHKRAK+KREEMSSVLRKM
Subjt:  MAQKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM

Query:  RAGGGG--EKKK
        R+GGGG  EKKK
Subjt:  RAGGGG--EKKK

Arabidopsis top hitse value%identityAlignment
AT2G37600.1 Ribosomal protein L36e family protein1.1e-4082.86Show/hide
Query:  TGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGG--
        TGLFVGLNKGH+VT++ELAPRP+ RKGK+SKR +F+R LIREVAG APYEKRITELLKVGKDKRALKVAKRKLGTHKRAK+KREEMSSVLRKMR+ GG  
Subjt:  TGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGG--

Query:  -GEKK
          EKK
Subjt:  -GEKK

AT3G53740.2 Ribosomal protein L36e family protein1.1e-4382.14Show/hide
Query:  MAQKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM
        M   Q  TGLFVGLNKGH+VT++ELAPRP  RKGK+SKR +F+RNLI+EVAG APYEKRITELLKVGKDKRALKVAKRKLGTHKRAK+KREEMSSVLRKM
Subjt:  MAQKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM

Query:  RAGGGG--EKKK
        R+GGGG  EKKK
Subjt:  RAGGGG--EKKK

AT3G53740.3 Ribosomal protein L36e family protein1.1e-4382.14Show/hide
Query:  MAQKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM
        M   Q  TGLFVGLNKGH+VT++ELAPRP  RKGK+SKR +F+RNLI+EVAG APYEKRITELLKVGKDKRALKVAKRKLGTHKRAK+KREEMSSVLRKM
Subjt:  MAQKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM

Query:  RAGGGG--EKKK
        R+GGGG  EKKK
Subjt:  RAGGGG--EKKK

AT3G53740.4 Ribosomal protein L36e family protein1.1e-4382.14Show/hide
Query:  MAQKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM
        M   Q  TGLFVGLNKGH+VT++ELAPRP  RKGK+SKR +F+RNLI+EVAG APYEKRITELLKVGKDKRALKVAKRKLGTHKRAK+KREEMSSVLRKM
Subjt:  MAQKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM

Query:  RAGGGG--EKKK
        R+GGGG  EKKK
Subjt:  RAGGGG--EKKK

AT5G02450.1 Ribosomal protein L36e family protein1.3e-4183.81Show/hide
Query:  TGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGG-
        TGLFVGLNKGH+VTK+E  PRP++RKGK+SKR +F+RNLI+EVAG APYEKRITELLKVGKDKRALKVAKRKLGTHKRAK+KREEMSSVLRKMR+GG G 
Subjt:  TGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGG-

Query:  -EKKK
         EKKK
Subjt:  -EKKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCTATGCAATGGCTCAGAAGCAGCCGAATACTGGTCTCTTCGTGGGGCTTAACAAAGGGCACATTGTTACAAAGAAAGAGTTGGCCCCGCGACCCTCAGATCGTAA
AGGAAAAAGTAGCAAGAGAGTTCTTTTTGTGAGGAATTTGATCCGGGAAGTTGCTGGCTTTGCGCCATATGAGAAGAGAATCACTGAGCTTCTTAAAGTTGGAAAGGACA
AGAGAGCACTAAAAGTGGCTAAGAGAAAGTTGGGAACTCACAAGAGAGCTAAGAAGAAGAGAGAGGAGATGTCCAGCGTTCTCCGCAAGATGAGAGCTGGTGGAGGTGGT
GAGAAGAAGAAATGA
mRNA sequenceShow/hide mRNA sequence
GTCTTTGGAAAAAAACACATTGGGCTTCAACCTCTTTCCTGGGCTGAATTAAAGAAGCCCAATAACATTTACGGAAAAAAGCCCAAAAGATCCTTTAGAGACCAACATCT
CGTCAATATCTCCTTATAAAATAAAGCTTCTGAAACCCTAATGCCTAGCTTCGCTCGCCTCCGATCGATCATTTTGTTCTACTCCATCTGAGAAGGTAAGACCTTTCATG
TTCTTCTTTCGTTCTTCTTTCTCTTGTACGATAATTGAACATAATATTTTTCCCTAGATTTTGATTCTACGATCTTGAGTTCGTCCTAGAGTATCAACTTTATCTGTGTT
TTTTTTTTTAAAAAAAATTTAGTGGCTGTTGCTGTAATCGAAATTTTCTTAGTTGTTTTGCTGGCTAACAATGCGATGCGTCTTGCTGAAGTTCAATTGCTAGAACTCTA
TAATGTTCTATGCAATGGCTCAGAAGCAGCCGAATACTGGTCTCTTCGTGGGGCTTAACAAAGGGCACATTGTTACAAAGAAAGAGTTGGCCCCGCGACCCTCAGATCGT
AAAGGAAAAAGTAGCAAGAGAGTTCTTTTTGTGAGGAATTTGATCCGGGAAGTTGCTGGCTTTGCGCCATATGAGAAGAGAATCACTGAGCTTCTTAAAGTTGGAAAGGA
CAAGAGAGCACTAAAAGTGGCTAAGAGAAAGTTGGGAACTCACAAGAGAGCTAAGAAGAAGAGAGAGGAGATGTCCAGCGTTCTCCGCAAGATGAGAGCTGGTGGAGGTG
GTGAGAAGAAGAAATGAAACATGTGTGGCGAATTTTGAAGCTTCAAATTTCCATAATGTTAGAGACATGTTTTAGATTGTTATTTTTGTTATCAAGAATGAAATTCAGTG
GATTTTTCAACTCTCTGTTAGATGAATTGTGATGGTATTAGAACTTAAATTTTAATCTCTACCAAGTCTTCTTTTTTTAATGAGAACCGTACGGCAATTTGCTTCTCTTT
TGATATAATTGCCGTTAGCTTGAAACTTGAAAGGAATGCAGCGTTTTATCAGCCTCTGAGAATGCTTTATTTTGTGGCAGAAAACTGTGAATCGTATACCTATG
Protein sequenceShow/hide protein sequence
MFYAMAQKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGG
EKKK