; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0003323 (gene) of Snake gourd v1 genome

Gene IDTan0003323
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionVQ domain-containing protein
Genome locationLG11:9688325..9689224
RNA-Seq ExpressionTan0003323
SyntenyTan0003323
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsIPR039607 - VQ motif-containing protein 8/17/18/20/21/25


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058916.1 hypothetical protein E6C27_scaffold98G00840 [Cucumis melo var. makuwa]6.1e-1542.17Show/hide
Query:  SSGSDPPER--KQQLQISKGSRKIKKPPLPPTPVNVRPPIIRHEVEPKIHIVKTPFDFKCLVQRLTGHPDQPLPSQDSDHDHDHDHDH-----DHPLGIL
        SS   PP    K  LQIS  SR IKKPPL   P    PP++++E+EP+I  V+TP DFK +VQ LTG P++P P    + DH  ++++     DHP GIL
Subjt:  SSGSDPPER--KQQLQISKGSRKIKKPPLPPTPVNVRPPIIRHEVEPKIHIVKTPFDFKCLVQRLTGHPDQPLPSQDSDHDHDHDHDH-----DHPLGIL

Query:  SPTPASLPPPVSPNAFAPPPDPLD------ELFLDLSNIPPLYS----NFNMPPRPLYYPPKFPDP
        SP P SL P VSP  F P P   D      +L  +L   PP  S      N+ P P   P   P P
Subjt:  SPTPASLPPPVSPNAFAPPPDPLD------ELFLDLSNIPPLYS----NFNMPPRPLYYPPKFPDP

KAG6602166.1 hypothetical protein SDJN03_07399, partial [Cucurbita argyrosperma subsp. sororia]5.9e-1043.42Show/hide
Query:  SSGSDPPER--KQQLQISKGSRKIKKPPLPPTPVNVRPPIIRHEVEPKIHIVKTPFDFKCLVQRLTGHPDQPLPSQDSDHDHDHDHDHDHPLGILSPTPA
        SSG  PPE+  +Q LQISK SR I KPPLPP+    R  II+++V+PKI  VKTP +FK +VQ LTG P+ P P              D P  +LSP   
Subjt:  SSGSDPPER--KQQLQISKGSRKIKKPPLPPTPVNVRPPIIRHEVEPKIHIVKTPFDFKCLVQRLTGHPDQPLPSQDSDHDHDHDHDHDHPLGILSPTPA

Query:  SLPPPVSPNAFAPPPDPLDELFLDLSNIPP-----LYS-NFNMPPRPLYYPP
          PPP SP    P PDP+D+  L   N PP     +Y  ++  P  P+  PP
Subjt:  SLPPPVSPNAFAPPPDPLDELFLDLSNIPP-----LYS-NFNMPPRPLYYPP

XP_008441652.2 PREDICTED: protein MKS1-like [Cucumis melo]4.2e-0841.28Show/hide
Query:  RKQQLQISKGSRKIKKPPLPPTPVNVRPPIIRHEVEPKIHIVKTPFDFKCLVQRLTGHPDQPLPSQDSDHDHDHDHDHDHPL------------------
        R   L+I+K S KIKKPPLPP P   RP II + V PKI I   P  FK LVQRLTGH  QP PS  S+H   HDH    P+                  
Subjt:  RKQQLQISKGSRKIKKPPLPPTPVNVRPPIIRHEVEPKIHIVKTPFDFKCLVQRLTGHPDQPLPSQDSDHDHDHDHDHDHPL------------------

Query:  ---GILSPTPASLPPPVSPNAFAPPP-----------DPLDELFLDLSNIPPLYSNFNMPPRPLYYPPKFPD
           GILSPTP  L PP+SP  F+ PP             L + F DLS IP  +      P   ++   FPD
Subjt:  ---GILSPTPASLPPPVSPNAFAPPP-----------DPLDELFLDLSNIPPLYSNFNMPPRPLYYPPKFPD

XP_022959600.1 extensin-like [Cucurbita moschata]2.9e-0943.42Show/hide
Query:  SSGSDPPER--KQQLQISKGSRKIKKPPLPPTPVNVRPPIIRHEVEPKIHIVKTPFDFKCLVQRLTGHPDQPLPSQDSDHDHDHDHDHDHPLGILSPTPA
        SSG  PPE+  +Q LQISK SR IKKPPLPP+    R  II+++V+PKI  VKTP +FK +VQ LTG P+ P P              D P  +LSP   
Subjt:  SSGSDPPER--KQQLQISKGSRKIKKPPLPPTPVNVRPPIIRHEVEPKIHIVKTPFDFKCLVQRLTGHPDQPLPSQDSDHDHDHDHDHDHPLGILSPTPA

Query:  SLPPPVSPNAFAPPPDPLDELFLDLSNIPP-----LYS-NFNMPPRPLYYPP
            P SP    P PDP+DE  L   N PP     +Y  ++  P  P+  PP
Subjt:  SLPPPVSPNAFAPPPDPLDELFLDLSNIPP-----LYS-NFNMPPRPLYYPP

XP_038885909.1 extensin-like [Benincasa hispida]6.5e-1748.05Show/hide
Query:  MRSSGSDPPE-RKQQLQISKGSRKIKKPPLPP-TPVNVRP-PIIRHEVEPKIHIVKTPFDFKCLVQRLTGHPDQPLPSQD-SDHDHDHDHDHDHPLGILS
        M SSGS P E RK+  QIS  SRKIKKPP PP T     P P++R+E EPKI  V+TP DFK +VQ LTG P++P P    + +DHD     D P GILS
Subjt:  MRSSGSDPPE-RKQQLQISKGSRKIKKPPLPP-TPVNVRP-PIIRHEVEPKIHIVKTPFDFKCLVQRLTGHPDQPLPSQD-SDHDHDHDHDHDHPLGILS

Query:  PTPASLPPPVSPNAFAPPPDPLDELFLDLSNIPPLYSNFNMPPRPLYYPPKFPD
        PTP SLP  V P+AF P P P                    PP PL  PP   D
Subjt:  PTPASLPPPVSPNAFAPPPDPLDELFLDLSNIPPLYSNFNMPPRPLYYPPKFPD

TrEMBL top hitse value%identityAlignment
A0A0A0KI80 VQ domain-containing protein5.9e-0841.62Show/hide
Query:  RKQQLQISKGSRKIKKPPLPPTPVNVRPPIIRHEVEPKIHIVKTPFDFKCLVQRLTGHPDQPLPSQDSDHDHDHDH----DH------DHPL--------
        R   L+I+K S KIKKPPLPP P   RP II + V PKI I   P +FK LVQRLTGH  QP PS  S+H   HDH    DH      D P+        
Subjt:  RKQQLQISKGSRKIKKPPLPPTPVNVRPPIIRHEVEPKIHIVKTPFDFKCLVQRLTGHPDQPLPSQDSDHDHDHDH----DH------DHPL--------

Query:  ----GILSPTPASLPPPVSPNAFAPPPD-----------PLDELFLDLSNIPPLYSNFNMPPRPLYYPPKFPD
            GILSPTP  L PP+S   F PPP             L + F DLS I   + + ++     ++   FPD
Subjt:  ----GILSPTPASLPPPVSPNAFAPPPD-----------PLDELFLDLSNIPPLYSNFNMPPRPLYYPPKFPD

A0A1S3B4N1 protein MKS1-like2.0e-0841.28Show/hide
Query:  RKQQLQISKGSRKIKKPPLPPTPVNVRPPIIRHEVEPKIHIVKTPFDFKCLVQRLTGHPDQPLPSQDSDHDHDHDHDHDHPL------------------
        R   L+I+K S KIKKPPLPP P   RP II + V PKI I   P  FK LVQRLTGH  QP PS  S+H   HDH    P+                  
Subjt:  RKQQLQISKGSRKIKKPPLPPTPVNVRPPIIRHEVEPKIHIVKTPFDFKCLVQRLTGHPDQPLPSQDSDHDHDHDHDHDHPL------------------

Query:  ---GILSPTPASLPPPVSPNAFAPPP-----------DPLDELFLDLSNIPPLYSNFNMPPRPLYYPPKFPD
           GILSPTP  L PP+SP  F+ PP             L + F DLS IP  +      P   ++   FPD
Subjt:  ---GILSPTPASLPPPVSPNAFAPPP-----------DPLDELFLDLSNIPPLYSNFNMPPRPLYYPPKFPD

A0A5A7UXK4 Uncharacterized protein2.9e-1542.17Show/hide
Query:  SSGSDPPER--KQQLQISKGSRKIKKPPLPPTPVNVRPPIIRHEVEPKIHIVKTPFDFKCLVQRLTGHPDQPLPSQDSDHDHDHDHDH-----DHPLGIL
        SS   PP    K  LQIS  SR IKKPPL   P    PP++++E+EP+I  V+TP DFK +VQ LTG P++P P    + DH  ++++     DHP GIL
Subjt:  SSGSDPPER--KQQLQISKGSRKIKKPPLPPTPVNVRPPIIRHEVEPKIHIVKTPFDFKCLVQRLTGHPDQPLPSQDSDHDHDHDHDH-----DHPLGIL

Query:  SPTPASLPPPVSPNAFAPPPDPLD------ELFLDLSNIPPLYS----NFNMPPRPLYYPPKFPDP
        SP P SL P VSP  F P P   D      +L  +L   PP  S      N+ P P   P   P P
Subjt:  SPTPASLPPPVSPNAFAPPPDPLD------ELFLDLSNIPPLYS----NFNMPPRPLYYPPKFPDP

A0A5A7UZA1 Protein MKS1-like2.0e-0841.28Show/hide
Query:  RKQQLQISKGSRKIKKPPLPPTPVNVRPPIIRHEVEPKIHIVKTPFDFKCLVQRLTGHPDQPLPSQDSDHDHDHDHDHDHPL------------------
        R   L+I+K S KIKKPPLPP P   RP II + V PKI I   P  FK LVQRLTGH  QP PS  S+H   HDH    P+                  
Subjt:  RKQQLQISKGSRKIKKPPLPPTPVNVRPPIIRHEVEPKIHIVKTPFDFKCLVQRLTGHPDQPLPSQDSDHDHDHDHDHDHPL------------------

Query:  ---GILSPTPASLPPPVSPNAFAPPP-----------DPLDELFLDLSNIPPLYSNFNMPPRPLYYPPKFPD
           GILSPTP  L PP+SP  F+ PP             L + F DLS IP  +      P   ++   FPD
Subjt:  ---GILSPTPASLPPPVSPNAFAPPP-----------DPLDELFLDLSNIPPLYSNFNMPPRPLYYPPKFPD

A0A6J1H6R4 extensin-like1.4e-0943.42Show/hide
Query:  SSGSDPPER--KQQLQISKGSRKIKKPPLPPTPVNVRPPIIRHEVEPKIHIVKTPFDFKCLVQRLTGHPDQPLPSQDSDHDHDHDHDHDHPLGILSPTPA
        SSG  PPE+  +Q LQISK SR IKKPPLPP+    R  II+++V+PKI  VKTP +FK +VQ LTG P+ P P              D P  +LSP   
Subjt:  SSGSDPPER--KQQLQISKGSRKIKKPPLPPTPVNVRPPIIRHEVEPKIHIVKTPFDFKCLVQRLTGHPDQPLPSQDSDHDHDHDHDHDHPLGILSPTPA

Query:  SLPPPVSPNAFAPPPDPLDELFLDLSNIPP-----LYS-NFNMPPRPLYYPP
            P SP    P PDP+DE  L   N PP     +Y  ++  P  P+  PP
Subjt:  SLPPPVSPNAFAPPPDPLDELFLDLSNIPP-----LYS-NFNMPPRPLYYPP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGTTCTTCAGGTTCTGATCCGCCGGAAAGAAAACAACAACTCCAAATCTCTAAAGGTTCCCGAAAGATCAAGAAGCCGCCACTGCCGCCGACTCCCGTCAATGTCCG
GCCGCCGATCATAAGACACGAGGTGGAGCCGAAGATCCATATCGTCAAAACCCCCTTTGATTTCAAGTGCCTCGTCCAACGCCTCACTGGCCATCCCGATCAACCCCTAC
CCTCCCAAGACTCCGATCACGATCACGATCACGATCACGACCACGACCACCCGCTTGGGATCCTCTCACCGACCCCCGCTTCTCTCCCCCCGCCCGTCTCTCCAAATGCC
TTTGCTCCGCCGCCCGACCCTCTTGATGAACTTTTCCTCGATCTATCTAATATTCCTCCATTGTATTCCAATTTCAATATGCCTCCACGCCCTCTTTACTATCCACCCAA
ATTTCCAGACCCCTTCAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGCGTTCTTCAGGTTCTGATCCGCCGGAAAGAAAACAACAACTCCAAATCTCTAAAGGTTCCCGAAAGATCAAGAAGCCGCCACTGCCGCCGACTCCCGTCAATGTCCG
GCCGCCGATCATAAGACACGAGGTGGAGCCGAAGATCCATATCGTCAAAACCCCCTTTGATTTCAAGTGCCTCGTCCAACGCCTCACTGGCCATCCCGATCAACCCCTAC
CCTCCCAAGACTCCGATCACGATCACGATCACGATCACGACCACGACCACCCGCTTGGGATCCTCTCACCGACCCCCGCTTCTCTCCCCCCGCCCGTCTCTCCAAATGCC
TTTGCTCCGCCGCCCGACCCTCTTGATGAACTTTTCCTCGATCTATCTAATATTCCTCCATTGTATTCCAATTTCAATATGCCTCCACGCCCTCTTTACTATCCACCCAA
ATTTCCAGACCCCTTCAATTAA
Protein sequenceShow/hide protein sequence
MRSSGSDPPERKQQLQISKGSRKIKKPPLPPTPVNVRPPIIRHEVEPKIHIVKTPFDFKCLVQRLTGHPDQPLPSQDSDHDHDHDHDHDHPLGILSPTPASLPPPVSPNA
FAPPPDPLDELFLDLSNIPPLYSNFNMPPRPLYYPPKFPDPFN