; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0003325 (gene) of Snake gourd v1 genome

Gene IDTan0003325
OrganismTrichosanthes anguina (Snake gourd v1)
Description60S ribosomal protein L35a-1
Genome locationLG04:1639272..1641622
RNA-Seq ExpressionTan0003325
SyntenyTan0003325
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0015031 - protein transport (biological process)
GO:0016192 - vesicle-mediated transport (biological process)
GO:0005789 - endoplasmic reticulum membrane (cellular component)
GO:0005829 - cytosol (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001780 - Ribosomal protein L35A
IPR009000 - Translation protein, beta-barrel domain superfamily
IPR018266 - Ribosomal protein L35Ae, conserved site
IPR038661 - Ribosomal protein L35A superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008463199.1 PREDICTED: 60S ribosomal protein L35a-1 [Cucumis melo]2.3e-5697.32Show/hide
Query:  MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKDGSHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG
        MVKGRQGERVRLY RGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKK+GSHYRCIWGKV+RPHGNSGIVRAKFKSNLPPKSMG
Subjt:  MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKDGSHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG

Query:  DRVRVFMYPSNI
        DRVRVFMYPSNI
Subjt:  DRVRVFMYPSNI

XP_022139205.1 60S ribosomal protein L35a-1-like [Momordica charantia]6.8e-5694.64Show/hide
Query:  MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKDGSHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG
        MVKGR+GERVRLY+RGT+LGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKK+G+HYRCIWGKV+RPHGNSGIVRAKFKSNLPPKSMG
Subjt:  MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKDGSHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG

Query:  DRVRVFMYPSNI
        DRVRVFMYPSNI
Subjt:  DRVRVFMYPSNI

XP_022156899.1 60S ribosomal protein L35a-1 [Momordica charantia]5.2e-5695.54Show/hide
Query:  MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKDGSHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG
        MVKGR+GERVRLY+RGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKK+G+HYRCIWGKV+RPHGNSGIVRAKFKSNLPPKSMG
Subjt:  MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKDGSHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG

Query:  DRVRVFMYPSNI
        DRVRVFMYPSNI
Subjt:  DRVRVFMYPSNI

XP_022996736.1 60S ribosomal protein L35a-1 [Cucurbita maxima]6.8e-5697.32Show/hide
Query:  MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKDGSHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG
        MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKK+GSHYRCIWGKV+R HGNSGIVRAKFKSNLPPKSMG
Subjt:  MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKDGSHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG

Query:  DRVRVFMYPSNI
        DRVRVFMYPSNI
Subjt:  DRVRVFMYPSNI

XP_038891868.1 60S ribosomal protein L35a-1 [Benincasa hispida]2.3e-5697.32Show/hide
Query:  MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKDGSHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG
        MVKGRQGERVRLY RGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKK+GSHYRCIWGKV+RPHGNSGIVRAKFKSNLPPKSMG
Subjt:  MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKDGSHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG

Query:  DRVRVFMYPSNI
        DRVRVFMYPSNI
Subjt:  DRVRVFMYPSNI

TrEMBL top hitse value%identityAlignment
A0A0A0KM11 Uncharacterized protein1.1e-5697.32Show/hide
Query:  MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKDGSHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG
        MVKGRQGERVRLY RGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKK+GSHYRCIWGKV+RPHGNSGIVRAKFKSNLPPKSMG
Subjt:  MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKDGSHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG

Query:  DRVRVFMYPSNI
        DRVRVFMYPSNI
Subjt:  DRVRVFMYPSNI

A0A1S3CIN8 60S ribosomal protein L35a-11.1e-5697.32Show/hide
Query:  MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKDGSHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG
        MVKGRQGERVRLY RGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKK+GSHYRCIWGKV+RPHGNSGIVRAKFKSNLPPKSMG
Subjt:  MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKDGSHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG

Query:  DRVRVFMYPSNI
        DRVRVFMYPSNI
Subjt:  DRVRVFMYPSNI

A0A5A7T1I6 Ribosomal protein L35A1.1e-5697.32Show/hide
Query:  MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKDGSHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG
        MVKGRQGERVRLY RGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKK+GSHYRCIWGKV+RPHGNSGIVRAKFKSNLPPKSMG
Subjt:  MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKDGSHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG

Query:  DRVRVFMYPSNI
        DRVRVFMYPSNI
Subjt:  DRVRVFMYPSNI

A0A6J1DUY8 60S ribosomal protein L35a-12.5e-5695.54Show/hide
Query:  MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKDGSHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG
        MVKGR+GERVRLY+RGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKK+G+HYRCIWGKV+RPHGNSGIVRAKFKSNLPPKSMG
Subjt:  MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKDGSHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG

Query:  DRVRVFMYPSNI
        DRVRVFMYPSNI
Subjt:  DRVRVFMYPSNI

A0A6J1K7M6 60S ribosomal protein L35a-13.3e-5697.32Show/hide
Query:  MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKDGSHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG
        MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKK+GSHYRCIWGKV+R HGNSGIVRAKFKSNLPPKSMG
Subjt:  MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKDGSHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG

Query:  DRVRVFMYPSNI
        DRVRVFMYPSNI
Subjt:  DRVRVFMYPSNI

SwissProt top hitse value%identityAlignment
P41056 60S ribosomal protein L33-B1.8e-2755.24Show/hide
Query:  ERVRLYVRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKDGSHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGDRVRVFM
        E  RLYV+G  L Y+RSK    PN SL++IEGV +  E  +Y GKR+AY+Y+A  +  GS  R +WGKV+R HGNSG+VRA F++NLP K+ G  VR+F+
Subjt:  ERVRLYVRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKDGSHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGDRVRVFM

Query:  YPSNI
        YPSNI
Subjt:  YPSNI

P51422 60S ribosomal protein L35a-41.1e-5386.49Show/hide
Query:  VKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKDGSHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGD
        +KGRQGERVRLYVRGT+LGYKRSKSNQYPNTSL+QIEGVN+++EV+WY+GKRLAYIYKAK KK+GSHYRCIWGKV+RPHGNSG+VR+KF SNLPPKSMG 
Subjt:  VKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKDGSHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGD

Query:  RVRVFMYPSNI
        RVRVFMYPSNI
Subjt:  RVRVFMYPSNI

Q9C912 60S ribosomal protein L35a-34.6e-5588.39Show/hide
Query:  MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKDGSHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG
        MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSL+QIEGVN+++EV+WY+GKR+AYIYKAK KK+GSHYRCIWGKV+RPHGNSG+VRAKF SNLPPKSMG
Subjt:  MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKDGSHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG

Query:  DRVRVFMYPSNI
         RVRVFMYPSNI
Subjt:  DRVRVFMYPSNI

Q9FZH0 60S ribosomal protein L35a-28.6e-5486.49Show/hide
Query:  VKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKDGSHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGD
        +KGRQGERVRLYVRGT+LGYKRSKSNQYPNTSL+QIEGVN+++EV+WY+GKRLAYIYKAK KK+GSHYRCIWGKV+RPHGNSG+VR+KF SNLPPKSMG 
Subjt:  VKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKDGSHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGD

Query:  RVRVFMYPSNI
        RVRVFMYPSNI
Subjt:  RVRVFMYPSNI

Q9LMK0 60S ribosomal protein L35a-14.6e-5588.39Show/hide
Query:  MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKDGSHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG
        MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSL+Q+EGVN+ +EVSWY+GKR+AYIYKAK KK+GSHYRCIWGKV+RPHGNSG+VRAKF SNLPPKSMG
Subjt:  MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKDGSHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG

Query:  DRVRVFMYPSNI
         RVRVFMYPSNI
Subjt:  DRVRVFMYPSNI

Arabidopsis top hitse value%identityAlignment
AT1G07070.1 Ribosomal protein L35Ae family protein3.2e-5688.39Show/hide
Query:  MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKDGSHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG
        MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSL+Q+EGVN+ +EVSWY+GKR+AYIYKAK KK+GSHYRCIWGKV+RPHGNSG+VRAKF SNLPPKSMG
Subjt:  MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKDGSHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG

Query:  DRVRVFMYPSNI
         RVRVFMYPSNI
Subjt:  DRVRVFMYPSNI

AT1G41880.1 Ribosomal protein L35Ae family protein6.1e-5586.49Show/hide
Query:  VKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKDGSHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGD
        +KGRQGERVRLYVRGT+LGYKRSKSNQYPNTSL+QIEGVN+++EV+WY+GKRLAYIYKAK KK+GSHYRCIWGKV+RPHGNSG+VR+KF SNLPPKSMG 
Subjt:  VKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKDGSHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGD

Query:  RVRVFMYPSNI
        RVRVFMYPSNI
Subjt:  RVRVFMYPSNI

AT1G74270.1 Ribosomal protein L35Ae family protein3.2e-5688.39Show/hide
Query:  MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKDGSHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG
        MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSL+QIEGVN+++EV+WY+GKR+AYIYKAK KK+GSHYRCIWGKV+RPHGNSG+VRAKF SNLPPKSMG
Subjt:  MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKDGSHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG

Query:  DRVRVFMYPSNI
         RVRVFMYPSNI
Subjt:  DRVRVFMYPSNI

AT3G55750.1 Ribosomal protein L35Ae family protein8.0e-5586.49Show/hide
Query:  VKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKDGSHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGD
        +KGRQGERVRLYVRGT+LGYKRSKSNQYPNTSL+QIEGVN+++EV+WY+GKRLAYIYKAK KK+GSHYRCIWGKV+RPHGNSG+VR+KF SNLPPKSMG 
Subjt:  VKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKDGSHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGD

Query:  RVRVFMYPSNI
        RVRVFMYPSNI
Subjt:  RVRVFMYPSNI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGAAGGGAAGGCAAGGAGAGAGAGTTAGACTCTACGTCAGGGGAACGATTCTCGGCTACAAGAGGTCGAAGTCGAACCAGTACCCAAACACTTCTTTACTCCAGAT
CGAGGGTGTTAATTCCAAGGACGAGGTTTCCTGGTACCAAGGAAAGCGATTGGCATATATCTACAAGGCTAAAGTGAAGAAGGACGGATCCCACTATCGTTGCATTTGGG
GCAAGGTCTCTAGGCCTCATGGTAACAGTGGTATTGTTAGAGCGAAGTTCAAGTCTAACCTGCCACCAAAGTCCATGGGTGACAGAGTCAGAGTATTCATGTACCCCAGC
AACATTTAA
mRNA sequenceShow/hide mRNA sequence
TTAGTGCGTCGGCCGTCATAGCTGAAGGAGAAACCAGACGCCGAAGATGGTGAAGGGAAGGCAAGGAGAGAGAGTTAGACTCTACGTCAGGGGAACGATTCTCGGCTACA
AGAGGTCGAAGTCGAACCAGTACCCAAACACTTCTTTACTCCAGATCGAGGGTGTTAATTCCAAGGACGAGGTTTCCTGGTACCAAGGAAAGCGATTGGCATATATCTAC
AAGGCTAAAGTGAAGAAGGACGGATCCCACTATCGTTGCATTTGGGGCAAGGTCTCTAGGCCTCATGGTAACAGTGGTATTGTTAGAGCGAAGTTCAAGTCTAACCTGCC
ACCAAAGTCCATGGGTGACAGAGTCAGAGTATTCATGTACCCCAGCAACATTTAAGCCATGAAGAACCTGGATGAAACGAGTGGTTGTTCCATGAAGGGATTTATATTTT
TATTATATTTTGTGAGCTAAGATAGAAGCATTTTCTGTTTGTGAACCGAGTCATTTTTGCTATTTAGGTAATGTTTCACCCTCAAGTAGTCGAACAGAACTTTAATGCCA
TTTGTCTTGAGCATTTTCGTGTGTTTTTGGAACGTAGTTGCACTCTTATCAAGTGGTTTTCCCGCATTCAAAGCTTCTACGTACTTGCGCTTTCAGTTATTATTAAATTA
GACTACACCACCTTATTACTGGATAATAGAGGTCAAAGTATATTTTTGATAGATAATATCAAGTTTTTCTATAATGGTCGATTAGATTAAATAAGATATAAATCTGATTT
ATGACATAGGTTCACCTATTGGTTATAAGCCTACCAAGGGCCGGTCCATTGAAATGTAAATTATAAACCCAAATTATAGTGAGTTATTTATCTAGATTTTAATATCTTAC
AAATTATGTTTGTATTTAATGAGCTTTAGGTGTGTGGTGTTAGGTTGTCTTCACAATTGAAGTGTGTAGGTTTGAATATTCATGAATATCAACAAGAAAAAAATGTTGTT
AGAGAG
Protein sequenceShow/hide protein sequence
MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKDGSHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPS
NI