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Tan0003332 (gene) of Snake gourd v1 genome

Gene IDTan0003332
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionATP-dependent helicase/nuclease subunit A isoform 1
Genome locationLG09:70315727..70316200
RNA-Seq ExpressionTan0003332
SyntenyTan0003332
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0004386 - helicase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7021603.1 hypothetical protein SDJN02_15329 [Cucurbita argyrosperma subsp. argyrosperma]2.3e-1495.45Show/hide
Query:  MIGNSRKWAYIRIITGTIVGGVLGFYVMHRVELGYKEKMKERAK
        MIGNSRKWAYIRIITGTIVGGVLGFYVMHRVEL YKEKMKER K
Subjt:  MIGNSRKWAYIRIITGTIVGGVLGFYVMHRVELGYKEKMKERAK

KGN63809.2 hypothetical protein Csa_013239 [Cucumis sativus]6.7e-1488.64Show/hide
Query:  MIGNSRKWAYIRIITGTIVGGVLGFYVMHRVELGYKEKMKERAK
        M+G+SRKWAYIRIITGT+VGGVLGFYVMHRVE+GYKEKMKER K
Subjt:  MIGNSRKWAYIRIITGTIVGGVLGFYVMHRVELGYKEKMKERAK

XP_004138234.1 uncharacterized protein LOC101217575 [Cucumis sativus]6.7e-1488.64Show/hide
Query:  MIGNSRKWAYIRIITGTIVGGVLGFYVMHRVELGYKEKMKERAK
        M+G+SRKWAYIRIITGT+VGGVLGFYVMHRVE+GYKEKMKER K
Subjt:  MIGNSRKWAYIRIITGTIVGGVLGFYVMHRVELGYKEKMKERAK

XP_022134690.1 uncharacterized protein LOC111006898 [Momordica charantia]5.7e-1384.09Show/hide
Query:  MIGNSRKWAYIRIITGTIVGGVLGFYVMHRVELGYKEKMKERAK
        M+GN RKWAY+RIITGTIVGGVLGFYVMHRVE+GYKEK+KER +
Subjt:  MIGNSRKWAYIRIITGTIVGGVLGFYVMHRVELGYKEKMKERAK

XP_038882309.1 uncharacterized protein LOC120073547 [Benincasa hispida]1.5e-1390.91Show/hide
Query:  MIGNSRKWAYIRIITGTIVGGVLGFYVMHRVELGYKEKMKERAK
        MIG+SRKWAY+RII GTIVGGVLGFYVMHRVELGYKEKMKER K
Subjt:  MIGNSRKWAYIRIITGTIVGGVLGFYVMHRVELGYKEKMKERAK

TrEMBL top hitse value%identityAlignment
A0A0A0LPI8 Uncharacterized protein2.3e-2385.94Show/hide
Query:  MIGNSRKWAYIRIITGTIVGGVLGFYVMHRVELGYKEKMKERAKIEVRGFCSLALEIDLIGTIQ
        M+G+SRKWAYIRIITGT+VGGVLGFYVMHRVE+GYKEKMKERAK+EVRGF +LALEIDLI T+Q
Subjt:  MIGNSRKWAYIRIITGTIVGGVLGFYVMHRVELGYKEKMKERAKIEVRGFCSLALEIDLIGTIQ

A0A1S3BW37 uncharacterized protein LOC1034941133.6e-1386.36Show/hide
Query:  MIGNSRKWAYIRIITGTIVGGVLGFYVMHRVELGYKEKMKERAK
        M+G+SRKWAY RII GTIVGGVLGFYVMHRVE+GYKEKMKER K
Subjt:  MIGNSRKWAYIRIITGTIVGGVLGFYVMHRVELGYKEKMKERAK

A0A5A7USD3 ATP-dependent helicase/nuclease subunit A isoform 13.6e-1386.36Show/hide
Query:  MIGNSRKWAYIRIITGTIVGGVLGFYVMHRVELGYKEKMKERAK
        M+G+SRKWAY RII GTIVGGVLGFYVMHRVE+GYKEKMKER K
Subjt:  MIGNSRKWAYIRIITGTIVGGVLGFYVMHRVELGYKEKMKERAK

A0A6J1BYI4 uncharacterized protein LOC1110068982.8e-1384.09Show/hide
Query:  MIGNSRKWAYIRIITGTIVGGVLGFYVMHRVELGYKEKMKERAK
        M+GN RKWAY+RIITGTIVGGVLGFYVMHRVE+GYKEK+KER +
Subjt:  MIGNSRKWAYIRIITGTIVGGVLGFYVMHRVELGYKEKMKERAK

A0A6J1E2A1 uncharacterized protein LOC1114301283.1e-1281.82Show/hide
Query:  MIGNSRKWAYIRIITGTIVGGVLGFYVMHRVELGYKEKMKERAK
        M+G+SR WAY+RII GTIVGGVLGFYVMHRVE+GYKEKMKER +
Subjt:  MIGNSRKWAYIRIITGTIVGGVLGFYVMHRVELGYKEKMKERAK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G18510.1 unknown protein5.3e-0960.53Show/hide
Query:  NSRKWAYIRIITGTIVGGVLGFYVMHRVELGYKEKMKE
        +S  W Y RII GT++GG LGFYVMHR+E+ YK +M+E
Subjt:  NSRKWAYIRIITGTIVGGVLGFYVMHRVELGYKEKMKE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCGGCAATTCTCGTAAATGGGCTTATATCCGGATTATCACCGGCACCATCGTCGGCGGCGTCCTCGGCTTCTATGTAATGCACCGCGTTGAACTTGGCTATAAGGA
GAAGATGAAGGAGAGGGCCAAAATTGAAGTTCGAGGGTTTTGTTCATTGGCTTTAGAAATTGATCTCATAGGAACAATCCAATTACTAATTATTACCTAA
mRNA sequenceShow/hide mRNA sequence
ATGATCGGCAATTCTCGTAAATGGGCTTATATCCGGATTATCACCGGCACCATCGTCGGCGGCGTCCTCGGCTTCTATGTAATGCACCGCGTTGAACTTGGCTATAAGGA
GAAGATGAAGGAGAGGGCCAAAATTGAAGTTCGAGGGTTTTGTTCATTGGCTTTAGAAATTGATCTCATAGGAACAATCCAATTACTAATTATTACCTAA
Protein sequenceShow/hide protein sequence
MIGNSRKWAYIRIITGTIVGGVLGFYVMHRVELGYKEKMKERAKIEVRGFCSLALEIDLIGTIQLLIIT