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Tan0003390 (gene) of Snake gourd v1 genome

Gene IDTan0003390
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionCCHC-type domain-containing protein
Genome locationLG02:63887452..63891909
RNA-Seq ExpressionTan0003390
SyntenyTan0003390
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283


Homology Show/hide homology
GenBank top hitse value%identityAlignment
VVA32948.1 PREDICTED: DUF4283 domain-containing [Prunus dulcis]6.1e-1136.7Show/hide
Query:  LGMLVEKLKLTTEENQAILVPDDDIDASSQLLQMALLCKSLATKPIMLDLFKQTIPKIWGATAPISIEKVGFNIFLCKFQSMADRRRAMENEPWYYDRAI
        +  L + L LT +E  AI V  +DID   + L+M+L+ K L T     + FKQT+ KIW     + ++ +G N+FL  F +  DR R + + PW +D+A+
Subjt:  LGMLVEKLKLTTEENQAILVPDDDIDASSQLLQMALLCKSLATKPIMLDLFKQTIPKIWGATAPISIEKVGFNIFLCKFQSMADRRRAMENEPWYYDRAI

Query:  LLIDEPRGS
        +L++ P GS
Subjt:  LLIDEPRGS

XP_022143536.1 uncharacterized protein LOC111013413 [Momordica charantia]6.6e-1336.44Show/hide
Query:  LGMLVEKLKLTTEENQAIL-VPDDDIDASSQLLQMALLCKSLATKPIMLDLFKQTIPKIWGATAPISIEKVGFNIFLCKFQSMADRRRAMENEPWYYDRA
        L   VE+LKLT EE   I  + +D+I+   +  Q +L+CK L  K I  ++FK  +P+IW     + IE VG N+FLCKF+++ D+ + + N P ++D++
Subjt:  LGMLVEKLKLTTEENQAIL-VPDDDIDASSQLLQMALLCKSLATKPIMLDLFKQTIPKIWGATAPISIEKVGFNIFLCKFQSMADRRRAMENEPWYYDRA

Query:  ILLIDEPRGSRRFVDHEF
        +++++EPR +  F + E+
Subjt:  ILLIDEPRGSRRFVDHEF

XP_022154990.1 uncharacterized protein LOC111022134 isoform X1 [Momordica charantia]6.3e-1637.8Show/hide
Query:  LGMLVEKLKLTTEENQAIL---------VPDDDIDASSQLLQMALLCKSLATKPIMLDLFKQTIPKIWGATAPISIEKVGFNIFLCKFQSMADRRRAMEN
        L  LVE+LKLT EE   I          + +D+I+   +  Q +L+CK L  K I  ++FK  +P+IW A   + IE VG N+FLCKF+++ D+ + + N
Subjt:  LGMLVEKLKLTTEENQAIL---------VPDDDIDASSQLLQMALLCKSLATKPIMLDLFKQTIPKIWGATAPISIEKVGFNIFLCKFQSMADRRRAMEN

Query:  EPWYYDRAILLIDEPRGSRRFVDHEFR
         PW++D+++++++EPR +  F + EFR
Subjt:  EPWYYDRAILLIDEPRGSRRFVDHEFR

XP_022154991.1 uncharacterized protein LOC111022134 isoform X2 [Momordica charantia]6.3e-1637.8Show/hide
Query:  LGMLVEKLKLTTEENQAIL---------VPDDDIDASSQLLQMALLCKSLATKPIMLDLFKQTIPKIWGATAPISIEKVGFNIFLCKFQSMADRRRAMEN
        L  LVE+LKLT EE   I          + +D+I+   +  Q +L+CK L  K I  ++FK  +P+IW A   + IE VG N+FLCKF+++ D+ + + N
Subjt:  LGMLVEKLKLTTEENQAIL---------VPDDDIDASSQLLQMALLCKSLATKPIMLDLFKQTIPKIWGATAPISIEKVGFNIFLCKFQSMADRRRAMEN

Query:  EPWYYDRAILLIDEPRGSRRFVDHEFR
         PW++D+++++++EPR +  F + EFR
Subjt:  EPWYYDRAILLIDEPRGSRRFVDHEFR

XP_042972822.1 uncharacterized protein LOC122304628 [Carya illinoinensis]3.0e-1032.48Show/hide
Query:  LGMLVEKLKLTTEENQAILVPDDDIDASSQLLQMALLCKSLATKPIMLDLFKQTIPKIWGATAPISIEKVGFNIFLCKFQSMADRRRAMENEPWYYDRAI
        L  L E LKLT EE Q I V  +++  S+   ++ L+   ++ K         T+PKIW A   ++ ++VG N+FL +F +  D+ R M   PW +D+ +
Subjt:  LGMLVEKLKLTTEENQAILVPDDDIDASSQLLQMALLCKSLATKPIMLDLFKQTIPKIWGATAPISIEKVGFNIFLCKFQSMADRRRAMENEPWYYDRAI

Query:  LLIDEPRGSRRFVDHEF
        L I +  G++   D +F
Subjt:  LLIDEPRGSRRFVDHEF

TrEMBL top hitse value%identityAlignment
A0A251R036 DUF4283 domain-containing protein1.9e-1036.27Show/hide
Query:  LKLTTEENQAILVPDDDIDASSQLLQMALLCKSLATKPIMLDLFKQTIPKIWGATAPISIEKVGFNIFLCKFQSMADRRRAMENEPWYYDRAILLIDEPR
        L LT EE   + + + D D   + L+ AL+ K L TK    + FKQT+ KIW  +  +  + +G N+FL  F +  DR+R + N PW +D+A++ ++EP 
Subjt:  LKLTTEENQAILVPDDDIDASSQLLQMALLCKSLATKPIMLDLFKQTIPKIWGATAPISIEKVGFNIFLCKFQSMADRRRAMENEPWYYDRAILLIDEPR

Query:  GS
        G+
Subjt:  GS

A0A5E4G034 PREDICTED: DUF4283 domain-containing3.0e-1136.7Show/hide
Query:  LGMLVEKLKLTTEENQAILVPDDDIDASSQLLQMALLCKSLATKPIMLDLFKQTIPKIWGATAPISIEKVGFNIFLCKFQSMADRRRAMENEPWYYDRAI
        +  L + L LT +E  AI V  +DID   + L+M+L+ K L T     + FKQT+ KIW     + ++ +G N+FL  F +  DR R + + PW +D+A+
Subjt:  LGMLVEKLKLTTEENQAILVPDDDIDASSQLLQMALLCKSLATKPIMLDLFKQTIPKIWGATAPISIEKVGFNIFLCKFQSMADRRRAMENEPWYYDRAI

Query:  LLIDEPRGS
        +L++ P GS
Subjt:  LLIDEPRGS

A0A6J1CQJ5 uncharacterized protein LOC1110134133.2e-1336.44Show/hide
Query:  LGMLVEKLKLTTEENQAIL-VPDDDIDASSQLLQMALLCKSLATKPIMLDLFKQTIPKIWGATAPISIEKVGFNIFLCKFQSMADRRRAMENEPWYYDRA
        L   VE+LKLT EE   I  + +D+I+   +  Q +L+CK L  K I  ++FK  +P+IW     + IE VG N+FLCKF+++ D+ + + N P ++D++
Subjt:  LGMLVEKLKLTTEENQAIL-VPDDDIDASSQLLQMALLCKSLATKPIMLDLFKQTIPKIWGATAPISIEKVGFNIFLCKFQSMADRRRAMENEPWYYDRA

Query:  ILLIDEPRGSRRFVDHEF
        +++++EPR +  F + E+
Subjt:  ILLIDEPRGSRRFVDHEF

A0A6J1DL64 uncharacterized protein LOC111022134 isoform X13.1e-1637.8Show/hide
Query:  LGMLVEKLKLTTEENQAIL---------VPDDDIDASSQLLQMALLCKSLATKPIMLDLFKQTIPKIWGATAPISIEKVGFNIFLCKFQSMADRRRAMEN
        L  LVE+LKLT EE   I          + +D+I+   +  Q +L+CK L  K I  ++FK  +P+IW A   + IE VG N+FLCKF+++ D+ + + N
Subjt:  LGMLVEKLKLTTEENQAIL---------VPDDDIDASSQLLQMALLCKSLATKPIMLDLFKQTIPKIWGATAPISIEKVGFNIFLCKFQSMADRRRAMEN

Query:  EPWYYDRAILLIDEPRGSRRFVDHEFR
         PW++D+++++++EPR +  F + EFR
Subjt:  EPWYYDRAILLIDEPRGSRRFVDHEFR

A0A6J1DQC9 uncharacterized protein LOC111022134 isoform X23.1e-1637.8Show/hide
Query:  LGMLVEKLKLTTEENQAIL---------VPDDDIDASSQLLQMALLCKSLATKPIMLDLFKQTIPKIWGATAPISIEKVGFNIFLCKFQSMADRRRAMEN
        L  LVE+LKLT EE   I          + +D+I+   +  Q +L+CK L  K I  ++FK  +P+IW A   + IE VG N+FLCKF+++ D+ + + N
Subjt:  LGMLVEKLKLTTEENQAIL---------VPDDDIDASSQLLQMALLCKSLATKPIMLDLFKQTIPKIWGATAPISIEKVGFNIFLCKFQSMADRRRAMEN

Query:  EPWYYDRAILLIDEPRGSRRFVDHEFR
         PW++D+++++++EPR +  F + EFR
Subjt:  EPWYYDRAILLIDEPRGSRRFVDHEFR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTTAGCCCAATTGGGAATGCTAGTTGAAAAACTGAAGCTGACAACAGAGGAGAATCAAGCCATTCTGGTCCCAGATGATGATATAGATGCAAGTTCACAACTCCT
TCAAATGGCTCTCCTTTGCAAAAGTCTGGCCACGAAGCCAATAATGCTTGACCTTTTTAAACAAACAATCCCAAAGATCTGGGGGGCAACTGCTCCGATATCGATTGAAA
AGGTGGGATTTAACATCTTTCTGTGCAAATTTCAATCCATGGCAGATAGGCGCAGAGCTATGGAGAATGAACCGTGGTACTATGACAGAGCCATCCTCCTCATCGATGAG
CCCAGGGGCTCGAGACGATTTGTTGATCACGAATTTCGGGGTCGAGGGAGATTCAATCGGGGAAGGAAAGATGGATCCAGATTTCAAACTACAAGCGAAGAAGATTCAGA
GGCAGATCCAAAGCTTAACACCTTCTCAACCCCGTCGGGTCAGGCGAGCGGCGGAGGTTCGTCGGCGACAGGGAAAAAGGAAAATGGAGCAACCGGCGGTGATAACTCAG
GGAAGTTCTCCGACGATTTTCAAATTATATTAAATGCATTAAATTTTTCAGAATCAATGACCTCAAAGGGAGAATCAACGGCGGGATTCAAGGAACATTCAAAGGCCCCC
CGAAAGATTAATGGCGCTGCAATTTTGGAGGTTACGAAAGGAATTGATTTCGACAAAACGAACCTTGAAAGGGAAGTCGAACTCATGGGGAAGACGAAGGTAGGGGAAAC
GACAATTGCGGGCCCCACCCCATTTAATTGTCTTCCTAAAAAAGTGGATGGGTTGGCAAGTTCAATCAGTGAGAAGACCATCGGACCTGAGGGAGAGTTGGGCCTAACAT
TCACAATGGGATCCAATCCGAAAGGGGAACCGCTGGGGCAAAGCACAGGACCAAGTAATTCAGCGAAAAATAAACAAAGGGCCCATCTGAACGAAGCTGGTGCGGCCCAC
GGACATGGCATCAATATTTCGGGTAAAAAAAGGGCACTTCAGCAAGCGCTGGCAGTCGAACCAAAGAAGAAGAGCCGAACTGGCGTTGAAACTGAATCTGAAAGGGAAGG
TATAGATGGAAAATTGGAAGTGGACACCAAGTCAACATCATGGATGATCCCTGGTTTACAATTGAAGGCCGGGAGAAACCGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGTTAGCCCAATTGGGAATGCTAGTTGAAAAACTGAAGCTGACAACAGAGGAGAATCAAGCCATTCTGGTCCCAGATGATGATATAGATGCAAGTTCACAACTCCT
TCAAATGGCTCTCCTTTGCAAAAGTCTGGCCACGAAGCCAATAATGCTTGACCTTTTTAAACAAACAATCCCAAAGATCTGGGGGGCAACTGCTCCGATATCGATTGAAA
AGGTGGGATTTAACATCTTTCTGTGCAAATTTCAATCCATGGCAGATAGGCGCAGAGCTATGGAGAATGAACCGTGGTACTATGACAGAGCCATCCTCCTCATCGATGAG
CCCAGGGGCTCGAGACGATTTGTTGATCACGAATTTCGGGGTCGAGGGAGATTCAATCGGGGAAGGAAAGATGGATCCAGATTTCAAACTACAAGCGAAGAAGATTCAGA
GGCAGATCCAAAGCTTAACACCTTCTCAACCCCGTCGGGTCAGGCGAGCGGCGGAGGTTCGTCGGCGACAGGGAAAAAGGAAAATGGAGCAACCGGCGGTGATAACTCAG
GGAAGTTCTCCGACGATTTTCAAATTATATTAAATGCATTAAATTTTTCAGAATCAATGACCTCAAAGGGAGAATCAACGGCGGGATTCAAGGAACATTCAAAGGCCCCC
CGAAAGATTAATGGCGCTGCAATTTTGGAGGTTACGAAAGGAATTGATTTCGACAAAACGAACCTTGAAAGGGAAGTCGAACTCATGGGGAAGACGAAGGTAGGGGAAAC
GACAATTGCGGGCCCCACCCCATTTAATTGTCTTCCTAAAAAAGTGGATGGGTTGGCAAGTTCAATCAGTGAGAAGACCATCGGACCTGAGGGAGAGTTGGGCCTAACAT
TCACAATGGGATCCAATCCGAAAGGGGAACCGCTGGGGCAAAGCACAGGACCAAGTAATTCAGCGAAAAATAAACAAAGGGCCCATCTGAACGAAGCTGGTGCGGCCCAC
GGACATGGCATCAATATTTCGGGTAAAAAAAGGGCACTTCAGCAAGCGCTGGCAGTCGAACCAAAGAAGAAGAGCCGAACTGGCGTTGAAACTGAATCTGAAAGGGAAGG
TATAGATGGAAAATTGGAAGTGGACACCAAGTCAACATCATGGATGATCCCTGGTTTACAATTGAAGGCCGGGAGAAACCGTTGA
Protein sequenceShow/hide protein sequence
MELAQLGMLVEKLKLTTEENQAILVPDDDIDASSQLLQMALLCKSLATKPIMLDLFKQTIPKIWGATAPISIEKVGFNIFLCKFQSMADRRRAMENEPWYYDRAILLIDE
PRGSRRFVDHEFRGRGRFNRGRKDGSRFQTTSEEDSEADPKLNTFSTPSGQASGGGSSATGKKENGATGGDNSGKFSDDFQIILNALNFSESMTSKGESTAGFKEHSKAP
RKINGAAILEVTKGIDFDKTNLEREVELMGKTKVGETTIAGPTPFNCLPKKVDGLASSISEKTIGPEGELGLTFTMGSNPKGEPLGQSTGPSNSAKNKQRAHLNEAGAAH
GHGINISGKKRALQQALAVEPKKKSRTGVETESEREGIDGKLEVDTKSTSWMIPGLQLKAGRNR