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Tan0003393 (gene) of Snake gourd v1 genome

Gene IDTan0003393
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionEF-hand domain-containing protein
Genome locationLG10:36252564..36256511
RNA-Seq ExpressionTan0003393
SyntenyTan0003393
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647951.1 hypothetical protein Csa_000525 [Cucumis sativus]4.5e-0771.43Show/hide
Query:  LNESEQRLQESERQRKVEVQALKDQIVGSEHRFEERFKIIMAEMRKQFV
        LNE +QRLQ+SERQRKVEVQALK QI+  E+RFE+RFK IM EM K+ V
Subjt:  LNESEQRLQESERQRKVEVQALKDQIVGSEHRFEERFKIIMAEMRKQFV
XP_004143706.2 probable calcium-binding protein CML44 [Cucumis sativus]4.5e-0771.43Show/hide
Query:  LNESEQRLQESERQRKVEVQALKDQIVGSEHRFEERFKIIMAEMRKQFV
        LNE +QRLQ+SERQRKVEVQALK QI+  E+RFE+RFK IM EM K+ V
Subjt:  LNESEQRLQESERQRKVEVQALKDQIVGSEHRFEERFKIIMAEMRKQFV
XP_038904040.1 uncharacterized protein LOC120090445 [Benincasa hispida]3.9e-1156.98Show/hide
Query:  KHGCVRGYGVGVTPSEFF---------ECHLNESEQRLQESERQRK-------VEVQALKDQIVGSEHRFEERFKIIMAEMRKQFV
        KHG V GYGVGVTPSE F         E  LNESEQRLQE E+QRK       +EV+ LK QI   E+RFE+RF+ +MAEM K+FV
Subjt:  KHGCVRGYGVGVTPSEFF---------ECHLNESEQRLQESERQRK-------VEVQALKDQIVGSEHRFEERFKIIMAEMRKQFV
TrEMBL top hitse value%identityAlignment
A0A0A0KLD7 EF-hand domain-containing protein2.2e-0771.43Show/hide
Query:  LNESEQRLQESERQRKVEVQALKDQIVGSEHRFEERFKIIMAEMRKQFV
        LNE +QRLQ+SERQRKVEVQALK QI+  E+RFE+RFK IM EM K+ V
Subjt:  LNESEQRLQESERQRKVEVQALKDQIVGSEHRFEERFKIIMAEMRKQFV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTTTTTCGACTTTCAGTCGGAACTCAAATCATATCCTTCTCAAGTGGTTGATGGTACACTTGACATGGATGAGGACGAGATCCTTGTGCAAGTTTTTGGACCAGAG
AAAGCATGGGTGTGTTCGTGGTTATGGGGTAGGTGTTACTCCTTCTGAGTTTTTTGAGTGTCATCTTAATGAGTCAGAACAACGTCTTCAAGAATCGGAACGACAAAGAA
AAGTCGAGGTACAAGCACTCAAAGATCAAATTGTTGGATCAGAACATCGTTTTGAGGAGAGATTTAAAATAATTATGGCAGAGATGCGTAAACAATTTGTTATTAATTTG
ATTGTGTAG
mRNA sequenceShow/hide mRNA sequence
TGGATTTTAAAACCCGTCGGTTAAACTTTAATCCTCGTTCTCCCCTTCCATTTCGTTTTTCCCTCCCTAGCCCTAGTCATGGATGTTTTATCCTTCTTCTCCCGTTGCCA
ATCACGTCGCCCACATCCTCCTCCGTCTGTTGCGATTGCCTCCCCTAATTCTCGTACATCTTCTTCTTCTTCTTCTTCTTTTCTGACGGGGAACTATGCAAATCCAATCA
AATCAAATGGACAAAATTCATTCAATCAATGATTTCTCTAATCTTTTTCAACATCCAGATAAGGAAGAGTACACCCCCTCTCTTTCAATTTCTCATGTGTTCATCCGCTC
TAATTCTGATTACTTTCTCTTCTTTGTTGCAGTATAATGAAATCCTCGACAAAGGAGTTTCCAATACACAGTACGAACAAATTTAGCCTCTCCTTCGTCTCCTTTGCATT
TTTGTAATTAGCATCGATTCTATCGAACATGCCTTTTTCGACTTTCAGTCGGAACTCAAATCATATCCTTCTCAAGTGGTTGATGGTACACTTGACATGGATGAGGACGA
GATCCTTGTGCAAGTTTTTGGACCAGAGAAAGCATGGGTGTGTTCGTGGTTATGGGGTAGGTGTTACTCCTTCTGAGTTTTTTGAGTGTCATCTTAATGAGTCAGAACAA
CGTCTTCAAGAATCGGAACGACAAAGAAAAGTCGAGGTACAAGCACTCAAAGATCAAATTGTTGGATCAGAACATCGTTTTGAGGAGAGATTTAAAATAATTATGGCAGA
GATGCGTAAACAATTTGTTATTAATTTGATTGTGTAGTAGTTAAATGTTCTACAACTTTTGTCATTATTTTGTCTATATAAATAATTTATGAGATCATGTCAAAATTATT
AGCTACTTTAAGACATTTATGTTTACATTGATCTTAAACCGCTTTAATAGAAGTTACTATTTCTTTATC
Protein sequenceShow/hide protein sequence
MPFSTFSRNSNHILLKWLMVHLTWMRTRSLCKFLDQRKHGCVRGYGVGVTPSEFFECHLNESEQRLQESERQRKVEVQALKDQIVGSEHRFEERFKIIMAEMRKQFVINL
IV