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Tan0003396 (gene) of Snake gourd v1 genome

Gene IDTan0003396
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionDUF4283 domain-containing protein
Genome locationLG05:58562724..58563201
RNA-Seq ExpressionTan0003396
SyntenyTan0003396
Gene Ontology termsGO:0003824 - catalytic activity (molecular function)
InterPro domainsIPR025558 - Domain of unknown function DUF4283


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047412.1 putative non-LTR retroelement reverse transcriptase [Cucumis melo var. makuwa]6.2e-2456.7Show/hide
Query:  MENGPWYIGGKPILLRKWVSGILLQSFVFHSIQVWFKLLNVSLHLWTPRGLSCVASVAGQPLCLDKATKGFSRLSFARMCVEVRVEDGLPAEVTMRL
        +  GPW +GGKP+LLRKW  GI+L+SFVF S+ VW KL  + + LWT  GL+ VASV G+PL LD ATK   RLS+AR+CVE+ V+  +PAE+T+ L
Subjt:  MENGPWYIGGKPILLRKWVSGILLQSFVFHSIQVWFKLLNVSLHLWTPRGLSCVASVAGQPLCLDKATKGFSRLSFARMCVEVRVEDGLPAEVTMRL

XP_022157428.1 uncharacterized protein LOC111024128 [Momordica charantia]6.9e-2355.67Show/hide
Query:  MENGPWYIGGKPILLRKWVSGILLQSFVFHSIQVWFKLLNVSLHLWTPRGLSCVASVAGQPLCLDKATKGFSRLSFARMCVEVRVEDGLPAEVTMRL
        + +GPW+IGGK + LR W  GI+ QSF F S+ VW KL N+ L LWTPRGLS + SV G PLCLDKAT+  SRLSFAR+ VE+R     P+ V +++
Subjt:  MENGPWYIGGKPILLRKWVSGILLQSFVFHSIQVWFKLLNVSLHLWTPRGLSCVASVAGQPLCLDKATKGFSRLSFARMCVEVRVEDGLPAEVTMRL

XP_031740405.1 uncharacterized protein LOC116403411 [Cucumis sativus]1.8e-2347.58Show/hide
Query:  MENGPWYIGGKPILLRKWVSGILLQSFVFHSIQVWFKLLNVSLHLWTPRGLSCVASVAGQPLCLDKATKGFSRLSFARMCVEVRVEDGLPAEVTMRLTVM
        +  GPW++GGKP+LLRKW  GI+ +SFVF S+ VW KL  + L LWT  GL+ VAS  G+PL +D ATK   RLS+AR+CVE+ V++ +PAEVT+ L   
Subjt:  MENGPWYIGGKPILLRKWVSGILLQSFVFHSIQVWFKLLNVSLHLWTPRGLSCVASVAGQPLCLDKATKGFSRLSFARMCVEVRVEDGLPAEVTMRLTVM

Query:  THVREELRRWDLSVLGQSRSLGLL
          +      W        RS G L
Subjt:  THVREELRRWDLSVLGQSRSLGLL

XP_031745056.1 uncharacterized protein LOC116405235 [Cucumis sativus]5.3e-2346.72Show/hide
Query:  MENGPWYIGGKPILLRKWVSGILLQSFVFHSIQVWFKLLNVSLHLWTPRGLSCVASVAGQPLCLDKATKGFSRLSFARMCVEVRVEDGLPAEVTMRLTVM
        +  GPW++GGKP+LLRKW  GI+ +SFVF+S+ VW KL  + L LWT  GL+ VAS  G+PL +D ATK    LS+AR+CVE+ V+  +PAEVT+ L   
Subjt:  MENGPWYIGGKPILLRKWVSGILLQSFVFHSIQVWFKLLNVSLHLWTPRGLSCVASVAGQPLCLDKATKGFSRLSFARMCVEVRVEDGLPAEVTMRLTVM

Query:  THVREELRRWDLSVLGQSRSLG
          +      W        RS G
Subjt:  THVREELRRWDLSVLGQSRSLG

XP_031745634.1 uncharacterized protein LOC116406053 [Cucumis sativus]5.8e-2246.72Show/hide
Query:  MENGPWYIGGKPILLRKWVSGILLQSFVFHSIQVWFKLLNVSLHLWTPRGLSCVASVAGQPLCLDKATKGFSRLSFARMCVEVRVEDGLPAEVTMRLTVM
        +  GPW++GGKP+LLRKW  GI+ +SFVF S+ V  KL  + L LWT  GL+ VAS  G+PL +D ATK   RLS+AR+CVE+ V+  +PAEVT+ L   
Subjt:  MENGPWYIGGKPILLRKWVSGILLQSFVFHSIQVWFKLLNVSLHLWTPRGLSCVASVAGQPLCLDKATKGFSRLSFARMCVEVRVEDGLPAEVTMRLTVM

Query:  THVREELRRWDLSVLGQSRSLG
          +      W        RS G
Subjt:  THVREELRRWDLSVLGQSRSLG

TrEMBL top hitse value%identityAlignment
A0A5A7TVB8 Putative non-LTR retroelement reverse transcriptase3.0e-2456.7Show/hide
Query:  MENGPWYIGGKPILLRKWVSGILLQSFVFHSIQVWFKLLNVSLHLWTPRGLSCVASVAGQPLCLDKATKGFSRLSFARMCVEVRVEDGLPAEVTMRL
        +  GPW +GGKP+LLRKW  GI+L+SFVF S+ VW KL  + + LWT  GL+ VASV G+PL LD ATK   RLS+AR+CVE+ V+  +PAE+T+ L
Subjt:  MENGPWYIGGKPILLRKWVSGILLQSFVFHSIQVWFKLLNVSLHLWTPRGLSCVASVAGQPLCLDKATKGFSRLSFARMCVEVRVEDGLPAEVTMRL

A0A5A7V507 DUF4283 domain-containing protein1.5e-2048.45Show/hide
Query:  MENGPWYIGGKPILLRKWVSGILLQSFVFHSIQVWFKLLNVSLHLWTPRGLSCVASVAGQPLCLDKATKGFSRLSFARMCVEVRVEDGLPAEVTMRL
        +  GPW++GGKP+L RKW  GI+ +SFVF+S+ VW  L  + + LWT  GL+ VA   G+P+ LD ATK   RLS+AR+CVE+     +P+E+T+ L
Subjt:  MENGPWYIGGKPILLRKWVSGILLQSFVFHSIQVWFKLLNVSLHLWTPRGLSCVASVAGQPLCLDKATKGFSRLSFARMCVEVRVEDGLPAEVTMRL

A0A5A7V5J2 Non-LTR retroelement reverse transcriptase-like protein1.4e-2151.55Show/hide
Query:  MENGPWYIGGKPILLRKWVSGILLQSFVFHSIQVWFKLLNVSLHLWTPRGLSCVASVAGQPLCLDKATKGFSRLSFARMCVEVRVEDGLPAEVTMRL
        +  GPW++GGKP+LLRKW  GI+ +SFVF+S+ VW +L  + + LWT   L+ VASV G+P+ LD ATK  SRLS+AR+CV++  E  + AE+T+ L
Subjt:  MENGPWYIGGKPILLRKWVSGILLQSFVFHSIQVWFKLLNVSLHLWTPRGLSCVASVAGQPLCLDKATKGFSRLSFARMCVEVRVEDGLPAEVTMRL

A0A5A7V9H8 DUF4283 domain-containing protein5.3e-2152.58Show/hide
Query:  MENGPWYIGGKPILLRKWVSGILLQSFVFHSIQVWFKLLNVSLHLWTPRGLSCVASVAGQPLCLDKATKGFSRLSFARMCVEVRVEDGLPAEVTMRL
        + + PW++GG P+LLRKW S I+ +SFVF+SI VW +L  V + LWT  GL  VASV G+P+ LD A K   RLS+AR+CVE+ V+  +PAE+T+ L
Subjt:  MENGPWYIGGKPILLRKWVSGILLQSFVFHSIQVWFKLLNVSLHLWTPRGLSCVASVAGQPLCLDKATKGFSRLSFARMCVEVRVEDGLPAEVTMRL

A0A6J1DTC3 uncharacterized protein LOC1110241283.3e-2355.67Show/hide
Query:  MENGPWYIGGKPILLRKWVSGILLQSFVFHSIQVWFKLLNVSLHLWTPRGLSCVASVAGQPLCLDKATKGFSRLSFARMCVEVRVEDGLPAEVTMRL
        + +GPW+IGGK + LR W  GI+ QSF F S+ VW KL N+ L LWTPRGLS + SV G PLCLDKAT+  SRLSFAR+ VE+R     P+ V +++
Subjt:  MENGPWYIGGKPILLRKWVSGILLQSFVFHSIQVWFKLLNVSLHLWTPRGLSCVASVAGQPLCLDKATKGFSRLSFARMCVEVRVEDGLPAEVTMRL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAACGGGCCATGGTACATAGGAGGTAAGCCTATCTTGCTTCGTAAGTGGGTTTCGGGTATTCTCCTGCAATCCTTTGTTTTTCATTCGATTCAAGTTTGGTTTAA
GTTGTTGAATGTTTCGTTGCACTTGTGGACCCCGAGGGGGTTAAGTTGTGTGGCAAGTGTTGCGGGTCAGCCTCTTTGCTTGGATAAGGCAACAAAAGGTTTTAGTAGGT
TGTCGTTTGCTCGTATGTGTGTGGAGGTTCGAGTGGAGGATGGGCTTCCGGCTGAGGTTACTATGCGATTGACGGTGATGACTCATGTCCGCGAAGAGTTGAGGAGGTGG
GATTTGTCTGTATTGGGACAGTCAAGGAGTCTAGGTTTACTAGGGAAGAGGGAAGTGGTCCTGGGGATGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAACGGGCCATGGTACATAGGAGGTAAGCCTATCTTGCTTCGTAAGTGGGTTTCGGGTATTCTCCTGCAATCCTTTGTTTTTCATTCGATTCAAGTTTGGTTTAA
GTTGTTGAATGTTTCGTTGCACTTGTGGACCCCGAGGGGGTTAAGTTGTGTGGCAAGTGTTGCGGGTCAGCCTCTTTGCTTGGATAAGGCAACAAAAGGTTTTAGTAGGT
TGTCGTTTGCTCGTATGTGTGTGGAGGTTCGAGTGGAGGATGGGCTTCCGGCTGAGGTTACTATGCGATTGACGGTGATGACTCATGTCCGCGAAGAGTTGAGGAGGTGG
GATTTGTCTGTATTGGGACAGTCAAGGAGTCTAGGTTTACTAGGGAAGAGGGAAGTGGTCCTGGGGATGTGA
Protein sequenceShow/hide protein sequence
MENGPWYIGGKPILLRKWVSGILLQSFVFHSIQVWFKLLNVSLHLWTPRGLSCVASVAGQPLCLDKATKGFSRLSFARMCVEVRVEDGLPAEVTMRLTVMTHVREELRRW
DLSVLGQSRSLGLLGKREVVLGM