; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0003408 (gene) of Snake gourd v1 genome

Gene IDTan0003408
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionRibosomal protein S7
Genome locationContig00034:128569..129997
RNA-Seq ExpressionTan0003408
SyntenyTan0003408
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF1858927.1 hypothetical protein Lal_00000747 [Lupinus albus]9.9e-4650.89Show/hide
Query:  MSSQLLRLNAFRGEPASSGFEWHFTPNHNSSADSSTSVGSDLHL------------------------ARGQSPGLLPLLGSLRFHVLFHSPMGVLFTLP
        MSSQLL LNAFRGEPASSG EWHFTPNHNSSADS TSVGSDLHL                        A GQSPG    LGS   H L     G +F   
Subjt:  MSSQLLRLNAFRGEPASSGFEWHFTPNHNSSADSSTSVGSDLHL------------------------ARGQSPGLLPLLGSLRFHVLFHSPMGVLFTLP

Query:  SRYYFTIGHPGVFSPRKVVLADSHWDSHVPHATHATGGAAPLHRFAYAARRSPTTPTTHGLGCSHFALRSTLLRNRFCFLFLLATKMFQFARLSLACPWI
         R+       G FSP             V     A  G         AARR  ++PTT          RS LLR      F LATKMFQFA LSLACPWI
Subjt:  SRYYFTIGHPGVFSPRKVVLADSHWDSHVPHATHATGGAAPLHRFAYAARRSPTTPTTHGLGCSHFALRSTLLRNRFCFLFLLATKMFQFARLSLACPWI

Query:  QQQFERLTYSGISGSTLIFNSPPEF------RRLLRPSSS--LGRSGIHRKPFFLECYIALYRLSSRVGDKRTRTADIRHR
        QQQFE+LTYSGISGSTLIFNSP  F       RL  P S+  +G+ G +        +IALYRLSSRVGDKRTRTADIRHR
Subjt:  QQQFERLTYSGISGSTLIFNSPPEF------RRLLRPSSS--LGRSGIHRKPFFLECYIALYRLSSRVGDKRTRTADIRHR

KAF1888201.1 hypothetical protein Lal_00030082, partial [Lupinus albus]8.1e-4852.42Show/hide
Query:  MSSQLLRLNAFRGEPASSGFEWHFTPNHNSSADSSTSVGSDLHLARGQ----------SPGLLPLLGSLRFHVLFHSPMGVLFTLPSRYYFTIGHPGVFS
        MS+QLL LNAFRGEP S+  EWHFT NHNSSADSSTSV SDLHL   +            GLLPLLGSL+FHVLFHSPMGVLFTLPS YYFTIGH GVFS
Subjt:  MSSQLLRLNAFRGEPASSGFEWHFTPNHNSSADSSTSVGSDLHLARGQ----------SPGLLPLLGSLRFHVLFHSPMGVLFTLPSRYYFTIGHPGVFS

Query:  PRKVVLADSHWDSH---------VPHATHATGGAAPLHRFAYAARRSPTTPTTHGLGCSHFALR---STLLRNRFCFLFLLATKMFQFARLSLACPWIQQ
                + W S          +  + H      PL   A     SPTTP       S F L    S LLR      F  ATKM     LSLACPWIQ+
Subjt:  PRKVVLADSHWDSH---------VPHATHATGGAAPLHRFAYAARRSPTTPTTHGLGCSHFALR---STLLRNRFCFLFLLATKMFQFARLSLACPWIQQ

Query:  QFERLTYSGISGSTLIFNSPPEF------RRLLRPSSS--LGRSGIHRKPFFLECYIALYRLSSRVGDK
         FE+LTYSGISGSTLIFNS   F       RL  P S+  +G+ G +        +IALYRLSSRVG+K
Subjt:  QFERLTYSGISGSTLIFNSPPEF------RRLLRPSSS--LGRSGIHRKPFFLECYIALYRLSSRVGDK

KAF3449759.1 hypothetical protein FNV43_RR05837 [Rhamnella rubrinervis]9.0e-3962.5Show/hide
Query:  LHLARGQSPGLLPLLGSLRFHVLFHSPMGVLFTLPSRYYFTIGHPGVFSPRKVVLADSHWDSHVPHATHATGGAAPLHRFAYAARRSPTTPTTHGLGCSH
        L  ARGQSPGLLPLLGSLRFHVLFHSPMGVLFTLPSRYYFTIGHPGVFS  +  L   H   HV HAT                              + 
Subjt:  LHLARGQSPGLLPLLGSLRFHVLFHSPMGVLFTLPSRYYFTIGHPGVFSPRKVVLADSHWDSHVPHATHATGGAAPLHRFAYAARRSPTTPTTHGLGCSH

Query:  FALRSTLLRNRFCFLFLLATKMFQFARLSLACPWIQQQFERLTYSGISGSTLIFNSPPEF
           RS LL       F LATKMFQFARLSLACPWIQQQFERLTYSGISGSTLIFNSP  F
Subjt:  FALRSTLLRNRFCFLFLLATKMFQFARLSLACPWIQQQFERLTYSGISGSTLIFNSPPEF

KAG4211951.1 hypothetical protein ERO13_A02G134101v2 [Gossypium hirsutum]2.4e-4453.14Show/hide
Query:  HFTPNHNSSADSSTSVGSDLH-------LARGQSPGLLPLLGSLRFHVLFHSPMGVLFTLPSRYYFTIGHPGVFS-PRKVVLADSHWDSHVPHATHATGG
        HF  N  +   S  S  +  H        ARGQSPGLLPLLGSLRFHVLFHSP GVLFTLPSRYYF IGHPGVFS  R+ +L   H   HVPHAT     
Subjt:  HFTPNHNSSADSSTSVGSDLH-------LARGQSPGLLPLLGSLRFHVLFHSPMGVLFTLPSRYYFTIGHPGVFS-PRKVVLADSHWDSHVPHATHATGG

Query:  AAPLHRFAYAARRSPTTPTTHGLGCSHFALRSTLLRNRFCFLFLLATKMFQFARLSLACPWIQQQFERLTYSGISGSTLIFNSPPEFRRLLRPSSSLGRS
          P H                          S LLR      F  ATKMFQFARLSL CPWIQQQFERLTYSGISGSTLIFNSP  F             
Subjt:  AAPLHRFAYAARRSPTTPTTHGLGCSHFALRSTLLRNRFCFLFLLATKMFQFARLSLACPWIQQQFERLTYSGISGSTLIFNSPPEFRRLLRPSSSLGRS

Query:  GIHRKPFFLECYIALYRL---SSRVGDKRTRTADIRHRL
                   Y AL RL   SSRVGDKRTRTADIRHR+
Subjt:  GIHRKPFFLECYIALYRL---SSRVGDKRTRTADIRHRL

YP_009526534.1 hypothetical protein [Ammopiptanthus mongolicus]1.1e-4753.54Show/hide
Query:  QLLRLNAFRGEPASSGFEWHFTPNHNSSADSSTSVGSDLHLARGQSPGLLPLLGSLRFHVLFHSPMGVLFTLPSRYYFTIGHPGVFSPRKVVLADSHWDS
        Q+L++ AF   P  S    +    + S A SST   S+         GLLPLLGSLRFHVLFHSPMGVLFTLPSRYYFTIGHPGVFS             
Subjt:  QLLRLNAFRGEPASSGFEWHFTPNHNSSADSSTSVGSDLHLARGQSPGLLPLLGSLRFHVLFHSPMGVLFTLPSRYYFTIGHPGVFSPRKVVLADSHWDS

Query:  HVPHATHATGGAAPLHRFAYAARRSPTTPTTHGLGCSHFALRSTLLRNRFCFLFLLATKMFQFARLSLACPWIQQQFERLTYSGISGSTLIFNSPPEF--
                     PL     AARR  ++PTT          RS LLR      F LATKMFQFARLSLACPWIQQQFE+LTYSGISGSTLIFNSP  F  
Subjt:  HVPHATHATGGAAPLHRFAYAARRSPTTPTTHGLGCSHFALRSTLLRNRFCFLFLLATKMFQFARLSLACPWIQQQFERLTYSGISGSTLIFNSPPEF--

Query:  ----RRLLRPSSS--LGRSGIHRKPFFLECYIALYRLSSRVGDKRTRTADIRHR
             RL  P S+  +G+ G +        +IALYRLSSRVGDKRTRTADIRHR
Subjt:  ----RRLLRPSSS--LGRSGIHRKPFFLECYIALYRLSSRVGDKRTRTADIRHR

TrEMBL top hitse value%identityAlignment
A0A2N9FRF2 Uncharacterized protein3.9e-5658.1Show/hide
Query:  HFTPNHNSSADSSTSVGSDLH-------LARGQSPGLLPLLGSLRFHVLFHSPMGVLFTLPSRYYFTIGHPGVFSPRKVVLADSHWDSHVPHATHATGGA
        HF  N  +   S  S  +  H        ARGQSPGLLPLLGSLRFHVLFHSPMGVLFTLPSRYYFTIGHPGVFS                        +
Subjt:  HFTPNHNSSADSSTSVGSDLH-------LARGQSPGLLPLLGSLRFHVLFHSPMGVLFTLPSRYYFTIGHPGVFSPRKVVLADSHWDSHVPHATHATGGA

Query:  APLHRFAYAARRSPTTPTTHGLGCSHFALRSTLLRNRFCFLFLLATKMFQFARLSLACPWIQQQFERLTYSGISGSTLIFNSPPEF------RRLLRPSS
         PL R   AARR   +PTT          RS LLR      F LATKMFQFARLSLACPWIQQQFERLTYSGISGSTLIFNSP  F       RL  P S
Subjt:  APLHRFAYAARRSPTTPTTHGLGCSHFALRSTLLRNRFCFLFLLATKMFQFARLSLACPWIQQQFERLTYSGISGSTLIFNSPPEF------RRLLRPSS

Query:  S--LGRSGIHRKPFFLECYIALYRLSSRVGDKRTRTADIRHRLQENQERRAFP
        +  +G+ G +        +IALYRLSSRVGDKRTRTADIRHRLQENQER+A P
Subjt:  S--LGRSGIHRKPFFLECYIALYRLSSRVGDKRTRTADIRHRLQENQERRAFP

A0A2N9H1D9 Uncharacterized protein3.8e-5157.02Show/hide
Query:  HFTPNHNSSADSSTSVGSDLH-------LARGQSPGLLPLLGSLRFHVLFHSPMGVLFTLPSRYYFTIGHPGVFSPRKVVLADSHWDSHVPHATHATGGA
        HF  N  +   S  S  +  H        ARGQSPGLLPLLGSLRFHVLFHSPMGVLFTLPSRYYFTIGHPGVFS                        +
Subjt:  HFTPNHNSSADSSTSVGSDLH-------LARGQSPGLLPLLGSLRFHVLFHSPMGVLFTLPSRYYFTIGHPGVFSPRKVVLADSHWDSHVPHATHATGGA

Query:  APLHRFAYAARRSPTTPTTHGLGCSHFALRSTLLRNRFCFLFLLATKMFQFARLSLACPWIQQQFERLTYSGISGSTLIFNSPPEF------RRLLRPSS
         PL R   AARR   +PTT          RS LLR      F LATKMFQFARLSLACPWIQQQFERLTYSGISGSTLIFNSP  F       RL  P S
Subjt:  APLHRFAYAARRSPTTPTTHGLGCSHFALRSTLLRNRFCFLFLLATKMFQFARLSLACPWIQQQFERLTYSGISGSTLIFNSPPEF------RRLLRPSS

Query:  S--LGRSGIHRKPFFLECYIALYRLSSRVGDKRTRTADIRHR
        +  +G+ G +        +IALYRLSSRVGDKRTRTADIRHR
Subjt:  S--LGRSGIHRKPFFLECYIALYRLSSRVGDKRTRTADIRHR

A0A2N9I3B0 Uncharacterized protein3.9e-5658.1Show/hide
Query:  HFTPNHNSSADSSTSVGSDLH-------LARGQSPGLLPLLGSLRFHVLFHSPMGVLFTLPSRYYFTIGHPGVFSPRKVVLADSHWDSHVPHATHATGGA
        HF  N  +   S  S  +  H        ARGQSPGLLPLLGSLRFHVLFHSPMGVLFTLPSRYYFTIGHPGVFS                        +
Subjt:  HFTPNHNSSADSSTSVGSDLH-------LARGQSPGLLPLLGSLRFHVLFHSPMGVLFTLPSRYYFTIGHPGVFSPRKVVLADSHWDSHVPHATHATGGA

Query:  APLHRFAYAARRSPTTPTTHGLGCSHFALRSTLLRNRFCFLFLLATKMFQFARLSLACPWIQQQFERLTYSGISGSTLIFNSPPEF------RRLLRPSS
         PL R   AARR   +PTT          RS LLR      F LATKMFQFARLSLACPWIQQQFERLTYSGISGSTLIFNSP  F       RL  P S
Subjt:  APLHRFAYAARRSPTTPTTHGLGCSHFALRSTLLRNRFCFLFLLATKMFQFARLSLACPWIQQQFERLTYSGISGSTLIFNSPPEF------RRLLRPSS

Query:  S--LGRSGIHRKPFFLECYIALYRLSSRVGDKRTRTADIRHRLQENQERRAFP
        +  +G+ G +        +IALYRLSSRVGDKRTRTADIRHRLQENQER+A P
Subjt:  S--LGRSGIHRKPFFLECYIALYRLSSRVGDKRTRTADIRHRLQENQERRAFP

A0A385G270 Uncharacterized protein5.1e-4853.54Show/hide
Query:  QLLRLNAFRGEPASSGFEWHFTPNHNSSADSSTSVGSDLHLARGQSPGLLPLLGSLRFHVLFHSPMGVLFTLPSRYYFTIGHPGVFSPRKVVLADSHWDS
        Q+L++ AF   P  S    +    + S A SST   S+         GLLPLLGSLRFHVLFHSPMGVLFTLPSRYYFTIGHPGVFS             
Subjt:  QLLRLNAFRGEPASSGFEWHFTPNHNSSADSSTSVGSDLHLARGQSPGLLPLLGSLRFHVLFHSPMGVLFTLPSRYYFTIGHPGVFSPRKVVLADSHWDS

Query:  HVPHATHATGGAAPLHRFAYAARRSPTTPTTHGLGCSHFALRSTLLRNRFCFLFLLATKMFQFARLSLACPWIQQQFERLTYSGISGSTLIFNSPPEF--
                     PL     AARR  ++PTT          RS LLR      F LATKMFQFARLSLACPWIQQQFE+LTYSGISGSTLIFNSP  F  
Subjt:  HVPHATHATGGAAPLHRFAYAARRSPTTPTTHGLGCSHFALRSTLLRNRFCFLFLLATKMFQFARLSLACPWIQQQFERLTYSGISGSTLIFNSPPEF--

Query:  ----RRLLRPSSS--LGRSGIHRKPFFLECYIALYRLSSRVGDKRTRTADIRHR
             RL  P S+  +G+ G +        +IALYRLSSRVGDKRTRTADIRHR
Subjt:  ----RRLLRPSSS--LGRSGIHRKPFFLECYIALYRLSSRVGDKRTRTADIRHR

A0A6A5NK39 Uncharacterized protein (Fragment)3.9e-4852.42Show/hide
Query:  MSSQLLRLNAFRGEPASSGFEWHFTPNHNSSADSSTSVGSDLHLARGQ----------SPGLLPLLGSLRFHVLFHSPMGVLFTLPSRYYFTIGHPGVFS
        MS+QLL LNAFRGEP S+  EWHFT NHNSSADSSTSV SDLHL   +            GLLPLLGSL+FHVLFHSPMGVLFTLPS YYFTIGH GVFS
Subjt:  MSSQLLRLNAFRGEPASSGFEWHFTPNHNSSADSSTSVGSDLHLARGQ----------SPGLLPLLGSLRFHVLFHSPMGVLFTLPSRYYFTIGHPGVFS

Query:  PRKVVLADSHWDSH---------VPHATHATGGAAPLHRFAYAARRSPTTPTTHGLGCSHFALR---STLLRNRFCFLFLLATKMFQFARLSLACPWIQQ
                + W S          +  + H      PL   A     SPTTP       S F L    S LLR      F  ATKM     LSLACPWIQ+
Subjt:  PRKVVLADSHWDSH---------VPHATHATGGAAPLHRFAYAARRSPTTPTTHGLGCSHFALR---STLLRNRFCFLFLLATKMFQFARLSLACPWIQQ

Query:  QFERLTYSGISGSTLIFNSPPEF------RRLLRPSSS--LGRSGIHRKPFFLECYIALYRLSSRVGDK
         FE+LTYSGISGSTLIFNS   F       RL  P S+  +G+ G +        +IALYRLSSRVG+K
Subjt:  QFERLTYSGISGSTLIFNSPPEF------RRLLRPSSS--LGRSGIHRKPFFLECYIALYRLSSRVGDK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCAGTCAACTGCTGCGCCTCAACGCATTTCGGGGAGAACCAGCTAGCTCTGGGTTCGAGTGGCATTTCACCCCTAACCACAACTCATCCGCTGATTCTTCAACATC
AGTCGGTTCGGACCTCCACTTAGCACGCGGTCAGAGTCCTGGTCTCCTCCCACTGCTTGGAAGCTTACGGTTTCATGTTCTATTTCACTCCCCGATGGGGGTTCTTTTCA
CCCTTCCCTCACGGTACTACTTCACTATCGGTCACCCAGGAGTATTTAGCCCCAGGAAGGTGGTCCTTGCTGATTCACACTGGGATTCACACGTGCCCCATGCTACTCAT
GCTACAGGCGGTGCAGCACCGCTCCACCGCTTCGCCTACGCAGCACGACGCTCTCCCACAACCCCCACAACCCACGGTTTAGGCTGCTCCCATTTCGCTCTCCGCTCTAC
GCTACTACGGAATCGCTTTTGCTTTCTTTTTCTTTTGGCTACTAAGATGTTTCAGTTCGCCAGGTTGTCTCTTGCCTGCCCATGGATTCAGCAGCAGTTTGAAAGGTTGA
CCTATTCGGGAATCTCCGGATCTACGCTTATTTTCAACTCCCCTCCCGAATTTCGTCGCTTACTACGCCCTTCCTCGTCTCTGGGTCGCTCTGGTATCCACCGTAAGCCT
TTCTTCCTGGAGTGCTATATAGCTTTGTATCGGCTAAGTTCACGAGTTGGAGATAAGCGGACTCGAACCGCTGACATCCGCCACAGGCTACAGGAGAACCAGGAACGGAG
AGCTTTCCCCCCTTTTCCGCCCGCCTCTTTGGTCTTAAGAATGCTGGTTTTAAGAATGAGTGATTGCCCTTCTCCGACCCTTACTGCCCAACCGGAGAGCGGACAGCTAA
TGCGTTCCACTTATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCCAGTCAACTGCTGCGCCTCAACGCATTTCGGGGAGAACCAGCTAGCTCTGGGTTCGAGTGGCATTTCACCCCTAACCACAACTCATCCGCTGATTCTTCAACATC
AGTCGGTTCGGACCTCCACTTAGCACGCGGTCAGAGTCCTGGTCTCCTCCCACTGCTTGGAAGCTTACGGTTTCATGTTCTATTTCACTCCCCGATGGGGGTTCTTTTCA
CCCTTCCCTCACGGTACTACTTCACTATCGGTCACCCAGGAGTATTTAGCCCCAGGAAGGTGGTCCTTGCTGATTCACACTGGGATTCACACGTGCCCCATGCTACTCAT
GCTACAGGCGGTGCAGCACCGCTCCACCGCTTCGCCTACGCAGCACGACGCTCTCCCACAACCCCCACAACCCACGGTTTAGGCTGCTCCCATTTCGCTCTCCGCTCTAC
GCTACTACGGAATCGCTTTTGCTTTCTTTTTCTTTTGGCTACTAAGATGTTTCAGTTCGCCAGGTTGTCTCTTGCCTGCCCATGGATTCAGCAGCAGTTTGAAAGGTTGA
CCTATTCGGGAATCTCCGGATCTACGCTTATTTTCAACTCCCCTCCCGAATTTCGTCGCTTACTACGCCCTTCCTCGTCTCTGGGTCGCTCTGGTATCCACCGTAAGCCT
TTCTTCCTGGAGTGCTATATAGCTTTGTATCGGCTAAGTTCACGAGTTGGAGATAAGCGGACTCGAACCGCTGACATCCGCCACAGGCTACAGGAGAACCAGGAACGGAG
AGCTTTCCCCCCTTTTCCGCCCGCCTCTTTGGTCTTAAGAATGCTGGTTTTAAGAATGAGTGATTGCCCTTCTCCGACCCTTACTGCCCAACCGGAGAGCGGACAGCTAA
TGCGTTCCACTTATTGA
Protein sequenceShow/hide protein sequence
MSSQLLRLNAFRGEPASSGFEWHFTPNHNSSADSSTSVGSDLHLARGQSPGLLPLLGSLRFHVLFHSPMGVLFTLPSRYYFTIGHPGVFSPRKVVLADSHWDSHVPHATH
ATGGAAPLHRFAYAARRSPTTPTTHGLGCSHFALRSTLLRNRFCFLFLLATKMFQFARLSLACPWIQQQFERLTYSGISGSTLIFNSPPEFRRLLRPSSSLGRSGIHRKP
FFLECYIALYRLSSRVGDKRTRTADIRHRLQENQERRAFPPFPPASLVLRMLVLRMSDCPSPTLTAQPESGQLMRSTY