; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0003409 (gene) of Snake gourd v1 genome

Gene IDTan0003409
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionFerredoxin-thioredoxin reductase catalytic chain, chloroplastic
Genome locationLG03:32493722..32505020
RNA-Seq ExpressionTan0003409
SyntenyTan0003409
Gene Ontology termsGO:0009536 - plastid (cellular component)
GO:0009055 - electron transfer activity (molecular function)
GO:0016730 - oxidoreductase activity, acting on iron-sulfur proteins as donors (molecular function)
GO:0051539 - 4 iron, 4 sulfur cluster binding (molecular function)
GO:0103012 - ferredoxin-thioredoxin reductase activity (molecular function)
InterPro domainsIPR004209 - Ferredoxin thioredoxin reductase catalytic beta subunit
IPR036644 - Ferredoxin thioredoxin reductase catalytic beta subunit superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG4395702.1 hypothetical protein GLYMA_19G013800v4 [Glycine max]1.4e-2467.74Show/hide
Query:  LVMIEGEPFEKSVEIMRKFSEQYARKSGTYFSHVR-----CKQGLEDHKYTLGAPLCPCRLHYDDKAAEVAQGLWNCPCVPTRESHMTLQLFL
        +V  + EP +KSVEIMRKFSEQYARKSGTYF   +       +GL DHK TLGAPLCPCR HYDDKAAEVAQG WNCPCVP RE +  L L L
Subjt:  LVMIEGEPFEKSVEIMRKFSEQYARKSGTYFSHVR-----CKQGLEDHKYTLGAPLCPCRLHYDDKAAEVAQGLWNCPCVPTRESHMTLQLFL

KAG7016167.1 Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]4.4e-2663.46Show/hide
Query:  LVMIEGEPFEKSVEIMRKFSEQYARKSGTYF----------------------SHVRCKQGLEDHKYTLGAPLCPCRLHYDDKAAEVAQGLWNCPCVPTR
        +V  + EP EKSVEIMRKFSEQYARKSGTYF                      +HVR KQGL DHK TLGAPLCPCR HYDDK AEVAQG WNCPCVP R
Subjt:  LVMIEGEPFEKSVEIMRKFSEQYARKSGTYF----------------------SHVRCKQGLEDHKYTLGAPLCPCRLHYDDKAAEVAQGLWNCPCVPTR

Query:  ESHM
        E  M
Subjt:  ESHM

XP_022923802.1 ferredoxin-thioredoxin reductase catalytic chain, chloroplastic-like [Cucurbita moschata]1.9e-2472.62Show/hide
Query:  LVMIEGEPFEKSVEIMRKFSEQYARKSGTYFSHVR-----CKQGLEDHKYTLGAPLCPCRLHYDDKAAEVAQGLWNCPCVPTRE
        +V  +GEP +KSVEIMRKFSEQYARKSGTYF   +       +GL DHK TLGAPLCPCR HYDDKAAEVAQG WNCPCVP RE
Subjt:  LVMIEGEPFEKSVEIMRKFSEQYARKSGTYFSHVR-----CKQGLEDHKYTLGAPLCPCRLHYDDKAAEVAQGLWNCPCVPTRE

XP_022989856.1 ferredoxin-thioredoxin reductase catalytic chain, chloroplastic-like [Cucurbita maxima]1.9e-2472.62Show/hide
Query:  LVMIEGEPFEKSVEIMRKFSEQYARKSGTYFSHVR-----CKQGLEDHKYTLGAPLCPCRLHYDDKAAEVAQGLWNCPCVPTRE
        +V  +GEP +KSVEIMRKFSEQYARKSGTYF   +       +GL DHK TLGAPLCPCR HYDDKAAEVAQG WNCPCVP RE
Subjt:  LVMIEGEPFEKSVEIMRKFSEQYARKSGTYFSHVR-----CKQGLEDHKYTLGAPLCPCRLHYDDKAAEVAQGLWNCPCVPTRE

XP_023511536.1 ferredoxin-thioredoxin reductase catalytic chain, chloroplastic-like [Cucurbita pepo subsp. pepo]1.9e-2472.62Show/hide
Query:  LVMIEGEPFEKSVEIMRKFSEQYARKSGTYFSHVR-----CKQGLEDHKYTLGAPLCPCRLHYDDKAAEVAQGLWNCPCVPTRE
        +V  +GEP +KSVEIMRKFSEQYARKSGTYF   +       +GL DHK TLGAPLCPCR HYDDKAAEVAQG WNCPCVP RE
Subjt:  LVMIEGEPFEKSVEIMRKFSEQYARKSGTYFSHVR-----CKQGLEDHKYTLGAPLCPCRLHYDDKAAEVAQGLWNCPCVPTRE

TrEMBL top hitse value%identityAlignment
A0A445HC61 Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic4.5e-2471.43Show/hide
Query:  LVMIEGEPFEKSVEIMRKFSEQYARKSGTYFSHVR-----CKQGLEDHKYTLGAPLCPCRLHYDDKAAEVAQGLWNCPCVPTRE
        +V  + EP +KSVEIMRKFSEQYARKSGTYF   +       +GL DHK TLGAPLCPCR HYDDKAAEVAQG WNCPCVP RE
Subjt:  LVMIEGEPFEKSVEIMRKFSEQYARKSGTYFSHVR-----CKQGLEDHKYTLGAPLCPCRLHYDDKAAEVAQGLWNCPCVPTRE

A0A6J1BYG9 Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic2.0e-2471.43Show/hide
Query:  LVMIEGEPFEKSVEIMRKFSEQYARKSGTYFSHVR-----CKQGLEDHKYTLGAPLCPCRLHYDDKAAEVAQGLWNCPCVPTRE
        +V  +GEP +KSVEIMRKFSEQYAR+SGTYF   +       +GL DHK TLGAPLCPCR HYDDKAAEVAQG WNCPCVP RE
Subjt:  LVMIEGEPFEKSVEIMRKFSEQYARKSGTYFSHVR-----CKQGLEDHKYTLGAPLCPCRLHYDDKAAEVAQGLWNCPCVPTRE

A0A6J1E756 Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic9.0e-2572.62Show/hide
Query:  LVMIEGEPFEKSVEIMRKFSEQYARKSGTYFSHVR-----CKQGLEDHKYTLGAPLCPCRLHYDDKAAEVAQGLWNCPCVPTRE
        +V  +GEP +KSVEIMRKFSEQYARKSGTYF   +       +GL DHK TLGAPLCPCR HYDDKAAEVAQG WNCPCVP RE
Subjt:  LVMIEGEPFEKSVEIMRKFSEQYARKSGTYFSHVR-----CKQGLEDHKYTLGAPLCPCRLHYDDKAAEVAQGLWNCPCVPTRE

A0A6J1JLC1 Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic9.0e-2572.62Show/hide
Query:  LVMIEGEPFEKSVEIMRKFSEQYARKSGTYFSHVR-----CKQGLEDHKYTLGAPLCPCRLHYDDKAAEVAQGLWNCPCVPTRE
        +V  +GEP +KSVEIMRKFSEQYARKSGTYF   +       +GL DHK TLGAPLCPCR HYDDKAAEVAQG WNCPCVP RE
Subjt:  LVMIEGEPFEKSVEIMRKFSEQYARKSGTYFSHVR-----CKQGLEDHKYTLGAPLCPCRLHYDDKAAEVAQGLWNCPCVPTRE

I1N5X5 Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic4.5e-2471.43Show/hide
Query:  LVMIEGEPFEKSVEIMRKFSEQYARKSGTYFSHVR-----CKQGLEDHKYTLGAPLCPCRLHYDDKAAEVAQGLWNCPCVPTRE
        +V  + EP +KSVEIMRKFSEQYARKSGTYF   +       +GL DHK TLGAPLCPCR HYDDKAAEVAQG WNCPCVP RE
Subjt:  LVMIEGEPFEKSVEIMRKFSEQYARKSGTYFSHVR-----CKQGLEDHKYTLGAPLCPCRLHYDDKAAEVAQGLWNCPCVPTRE

SwissProt top hitse value%identityAlignment
O49856 Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic1.2e-2671.43Show/hide
Query:  LVMIEGEPFEKSVEIMRKFSEQYARKSGTYFSHVR-----CKQGLEDHKYTLGAPLCPCRLHYDDKAAEVAQGLWNCPCVPTRE
        +V  + EP +KSVEIMRKFSEQYARKSGTYF   +       +GL DHK TLGAPLCPCR HYDDKAAEVAQG WNCPCVP RE
Subjt:  LVMIEGEPFEKSVEIMRKFSEQYARKSGTYFSHVR-----CKQGLEDHKYTLGAPLCPCRLHYDDKAAEVAQGLWNCPCVPTRE

P41347 Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic3.7e-2369.33Show/hide
Query:  EKSVEIMRKFSEQYARKSGTYFSHVRCK-----QGLEDHKYTLGAPLCPCRLHYDDKAAEVAQGLWNCPCVPTRE
        +KSVE+MRKFSEQYAR+S T+F   +       +GL DH+ TLGAPLCPCR HYDDKAAEVAQG WNCPCVP RE
Subjt:  EKSVEIMRKFSEQYARKSGTYFSHVRCK-----QGLEDHKYTLGAPLCPCRLHYDDKAAEVAQGLWNCPCVPTRE

P41349 Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic9.6e-2464.29Show/hide
Query:  LVMIEGEPFEKSVEIMRKFSEQYARKSGTYFSHVR-----CKQGLEDHKYTLGAPLCPCRLHYDDKAAEVAQGLWNCPCVPTRE
        +++ + EP +KSVEIMRKFSEQYARKSGTYF   +       +GL +HK +LGAPLCPCR +YDDKAAE  QG WNCPCVP RE
Subjt:  LVMIEGEPFEKSVEIMRKFSEQYARKSGTYFSHVR-----CKQGLEDHKYTLGAPLCPCRLHYDDKAAEVAQGLWNCPCVPTRE

Q6K471 Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic8.1e-2369.33Show/hide
Query:  EKSVEIMRKFSEQYARKSGTYFSHVRCK-----QGLEDHKYTLGAPLCPCRLHYDDKAAEVAQGLWNCPCVPTRE
        +KS+EIMRKFSEQYAR+S T+F   +       +GL DHK  LGAPLCPCR HYDDKAAEVAQG WNCPCVP RE
Subjt:  EKSVEIMRKFSEQYARKSGTYFSHVRCK-----QGLEDHKYTLGAPLCPCRLHYDDKAAEVAQGLWNCPCVPTRE

Q9SJ89 Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic3.3e-2465.48Show/hide
Query:  LVMIEGEPFEKSVEIMRKFSEQYARKSGTYFSHVR-----CKQGLEDHKYTLGAPLCPCRLHYDDKAAEVAQGLWNCPCVPTRE
        ++  + EP EKSVEIMRKFSEQYAR+SGTYF   +       +GL +HK + GAPLCPCR HYDDKAAEV QG WNCPCVP RE
Subjt:  LVMIEGEPFEKSVEIMRKFSEQYARKSGTYFSHVR-----CKQGLEDHKYTLGAPLCPCRLHYDDKAAEVAQGLWNCPCVPTRE

Arabidopsis top hitse value%identityAlignment
AT2G04700.1 ferredoxin thioredoxin reductase catalytic beta chain family protein2.3e-2565.48Show/hide
Query:  LVMIEGEPFEKSVEIMRKFSEQYARKSGTYFSHVR-----CKQGLEDHKYTLGAPLCPCRLHYDDKAAEVAQGLWNCPCVPTRE
        ++  + EP EKSVEIMRKFSEQYAR+SGTYF   +       +GL +HK + GAPLCPCR HYDDKAAEV QG WNCPCVP RE
Subjt:  LVMIEGEPFEKSVEIMRKFSEQYARKSGTYFSHVR-----CKQGLEDHKYTLGAPLCPCRLHYDDKAAEVAQGLWNCPCVPTRE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCTTGTTATGATCGAAGGAGAACCGTTTGAGAAGTCGGTCGAAATAATGAGGAAATTCTCCGAGCAGTATGCTCGTAAGTCAGGAACGTATTTCTCTCATGTTAG
ATGTAAACAAGGACTAGAAGATCACAAATATACATTGGGTGCACCACTTTGTCCCTGTCGGTTACATTATGATGACAAAGCTGCTGAGGTTGCACAAGGTCTATGGAATT
GCCCATGTGTTCCTACCAGAGAAAGTCATATGACACTTCAACTCTTTTTAGTCATTTTTGGTCACTTTGTAGAATTATATATCTTGATATTAAATAGTGAAACATTTTGT
AATTTAATGAATAGTATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGCTTGTTATGATCGAAGGAGAACCGTTTGAGAAGTCGGTCGAAATAATGAGGAAATTCTCCGAGCAGTATGCTCGTAAGTCAGGAACGTATTTCTCTCATGTTAG
ATGTAAACAAGGACTAGAAGATCACAAATATACATTGGGTGCACCACTTTGTCCCTGTCGGTTACATTATGATGACAAAGCTGCTGAGGTTGCACAAGGTCTATGGAATT
GCCCATGTGTTCCTACCAGAGAAAGTCATATGACACTTCAACTCTTTTTAGTCATTTTTGGTCACTTTGTAGAATTATATATCTTGATATTAAATAGTGAAACATTTTGT
AATTTAATGAATAGTATTTGA
Protein sequenceShow/hide protein sequence
MELVMIEGEPFEKSVEIMRKFSEQYARKSGTYFSHVRCKQGLEDHKYTLGAPLCPCRLHYDDKAAEVAQGLWNCPCVPTRESHMTLQLFLVIFGHFVELYILILNSETFC
NLMNSI