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Tan0003413 (gene) of Snake gourd v1 genome

Gene IDTan0003413
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG08:72752232..72755812
RNA-Seq ExpressionTan0003413
SyntenyTan0003413
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6580501.1 hypothetical protein SDJN03_20503, partial [Cucurbita argyrosperma subsp. sororia]4.8e-0481.25Show/hide
Query:  GESIAVLSCSIWVKPQKSVLHLMRKEMGLWLL
        GE IAV SC+IWVKPQKS+LHLMRKEMGL L+
Subjt:  GESIAVLSCSIWVKPQKSVLHLMRKEMGLWLL

KAG7017252.1 hypothetical protein SDJN02_19115, partial [Cucurbita argyrosperma subsp. argyrosperma]4.8e-0481.25Show/hide
Query:  GESIAVLSCSIWVKPQKSVLHLMRKEMGLWLL
        GE IAV SC+IWVKPQKS+LHLMRKEMGL L+
Subjt:  GESIAVLSCSIWVKPQKSVLHLMRKEMGLWLL

XP_023540012.1 uncharacterized protein LOC111800516 isoform X1 [Cucurbita pepo subsp. pepo]2.0e-1052.78Show/hide
Query:  KRSCYWFRSSNSVRGVENKRLHRLMLEEFSGALKHRHLFFQPHLYNATNSNQGESIAVLSCSIWVKPQKSVL
        +RSC+W R S      +NKRL R MLEEF+GA KHRHL  Q HL+   N NQGES  +LS +IW   Q+S++
Subjt:  KRSCYWFRSSNSVRGVENKRLHRLMLEEFSGALKHRHLFFQPHLYNATNSNQGESIAVLSCSIWVKPQKSVL

XP_023540013.1 uncharacterized protein LOC111800516 isoform X2 [Cucurbita pepo subsp. pepo]2.0e-1052.78Show/hide
Query:  KRSCYWFRSSNSVRGVENKRLHRLMLEEFSGALKHRHLFFQPHLYNATNSNQGESIAVLSCSIWVKPQKSVL
        +RSC+W R S      +NKRL R MLEEF+GA KHRHL  Q HL+   N NQGES  +LS +IW   Q+S++
Subjt:  KRSCYWFRSSNSVRGVENKRLHRLMLEEFSGALKHRHLFFQPHLYNATNSNQGESIAVLSCSIWVKPQKSVL

TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGGAACTCAAAGACGTAGAGAAATCATTGGGTCTCGCAGGCGCCAAGAGAAGCTTACCATTATCGGGACGCTGCATTGGCCGGTTGAATCGTTTATGGCGCCAGC
CGTGGAGACCTTCGTCATTGTTGTCACTTATCCATATGTGGAAGCTTATCGTCTATCTTCCTCTGCTCGCGCGGTAAACTTGCCTTCATACGAGGACGGTATTCAATTCA
ACTTTACATATGCGGAGAGTAGGTGCAGAAACCAGCGAATAGAGGGAGAATCTGTCTCTAAACCGAGCGATGAGACGGAGGAGAGGTGTTTGATGAAACGATCGTGTTAT
TGGTTCAGAAGCTCGAATTCTGTCAGAGGTGTAGAAAATAAAAGGCTACATCGGTTGATGTTGGAAGAATTTAGTGGAGCTTTAAAGCATCGACATCTCTTTTTCCAACC
CCATCTCTACAATGCTACTAATTCGAATCAAGGTGAAAGTATAGCTGTTCTATCATGCAGCATTTGGGTCAAACCACAGAAGTCTGTTCTGCATTTAATGAGAAAAGAAA
TGGGACTATGGTTGTTGATTCGAATACTTTGGTGGCACCTTTTTACTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGGAACTCAAAGACGTAGAGAAATCATTGGGTCTCGCAGGCGCCAAGAGAAGCTTACCATTATCGGGACGCTGCATTGGCCGGTTGAATCGTTTATGGCGCCAGC
CGTGGAGACCTTCGTCATTGTTGTCACTTATCCATATGTGGAAGCTTATCGTCTATCTTCCTCTGCTCGCGCGGTAAACTTGCCTTCATACGAGGACGGTATTCAATTCA
ACTTTACATATGCGGAGAGTAGGTGCAGAAACCAGCGAATAGAGGGAGAATCTGTCTCTAAACCGAGCGATGAGACGGAGGAGAGGTGTTTGATGAAACGATCGTGTTAT
TGGTTCAGAAGCTCGAATTCTGTCAGAGGTGTAGAAAATAAAAGGCTACATCGGTTGATGTTGGAAGAATTTAGTGGAGCTTTAAAGCATCGACATCTCTTTTTCCAACC
CCATCTCTACAATGCTACTAATTCGAATCAAGGTGAAAGTATAGCTGTTCTATCATGCAGCATTTGGGTCAAACCACAGAAGTCTGTTCTGCATTTAATGAGAAAAGAAA
TGGGACTATGGTTGTTGATTCGAATACTTTGGTGGCACCTTTTTACTTAATTGCCTTGTACTAAGGTGTGAAAACACTTCCACCTTTTTTGGGTAAATAGCAGCGACGAG
GTATAACTGCAGTATAGAGAATTTTTCAGAATATTCTGATTGAAATTTTCTCCACGTGACTCTCAAGGTTATACTTCTCTATCTCATTTTTAGTACTACTAAGCAAGCAT
TACTGCTACATTAATTCCATGA
Protein sequenceShow/hide protein sequence
MAGTQRRREIIGSRRRQEKLTIIGTLHWPVESFMAPAVETFVIVVTYPYVEAYRLSSSARAVNLPSYEDGIQFNFTYAESRCRNQRIEGESVSKPSDETEERCLMKRSCY
WFRSSNSVRGVENKRLHRLMLEEFSGALKHRHLFFQPHLYNATNSNQGESIAVLSCSIWVKPQKSVLHLMRKEMGLWLLIRILWWHLFT