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Tan0003426 (gene) of Snake gourd v1 genome

Gene IDTan0003426
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionGibberellin-regulated protein
Genome locationLG01:6253789..6254353
RNA-Seq ExpressionTan0003426
SyntenyTan0003426
Gene Ontology termsNA
InterPro domainsIPR003854 - Gibberellin regulated protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044354.1 peamaclein-like [Cucumis melo var. makuwa]1.5e-4292.13Show/hide
Query:  MKKLFFFTFLLCFLLFTSSFIDIVIAKPVFCDRKCKKRCSKAGVKDRCIKYCGICCGFCKCVPSGTYGNKHECPCYRDMKSSKGRPKCP
        MKKLFFFTFLLCFLLFTSSFID V AKPVFCD+KCKKRCS+AGVKDRC+KYCGICCG+CKCVPSGTYGNKHECPCYRDM+SSKGRPKCP
Subjt:  MKKLFFFTFLLCFLLFTSSFIDIVIAKPVFCDRKCKKRCSKAGVKDRCIKYCGICCGFCKCVPSGTYGNKHECPCYRDMKSSKGRPKCP

KAE8649034.1 hypothetical protein Csa_014887 [Cucumis sativus]4.0e-4394.38Show/hide
Query:  MKKLFFFTFLLCFLLFTSSFIDIVIAKPVFCDRKCKKRCSKAGVKDRCIKYCGICCGFCKCVPSGTYGNKHECPCYRDMKSSKGRPKCP
        MKKLF FTFLLCFLLFTSSFIDIV AKPVFCD+KCKKRCSKAGVKDRCIKYCGICCG+CKCVPSGTYGNKHECPCYRDM+SSKGRPKCP
Subjt:  MKKLFFFTFLLCFLLFTSSFIDIVIAKPVFCDRKCKKRCSKAGVKDRCIKYCGICCGFCKCVPSGTYGNKHECPCYRDMKSSKGRPKCP

XP_002313889.2 peamaclein [Populus trichocarpa]2.7e-3171.91Show/hide
Query:  MKKLFFFTFLLCFLLFTSSFIDIVIAKPVFCDRKCKKRCSKAGVKDRCIKYCGICCGFCKCVPSGTYGNKHECPCYRDMKSSKGRPKCP
        MKKLFF T LLC LLF+SSF++ V+AK  FC +KC+ RC+ AG++DRC+KYCGICC  CKCVPSGTYGNKHECPCYRD ++SKG+PKCP
Subjt:  MKKLFFFTFLLCFLLFTSSFIDIVIAKPVFCDRKCKKRCSKAGVKDRCIKYCGICCGFCKCVPSGTYGNKHECPCYRDMKSSKGRPKCP

XP_022149266.1 peamaclein-like [Momordica charantia]5.4e-4088.76Show/hide
Query:  MKKLFFFTFLLCFLLFTSSFIDIVIAKPVFCDRKCKKRCSKAGVKDRCIKYCGICCGFCKCVPSGTYGNKHECPCYRDMKSSKGRPKCP
        MKKLFF T LLCFLLFTSSFI+IVIAK VFCD++CKKRCSKAGV DRCIKYCGICCG+CKCVPSGTYGNKHECPCYRDM+SSKG+PKCP
Subjt:  MKKLFFFTFLLCFLLFTSSFIDIVIAKPVFCDRKCKKRCSKAGVKDRCIKYCGICCGFCKCVPSGTYGNKHECPCYRDMKSSKGRPKCP

XP_038906246.1 peamaclein-like [Benincasa hispida]3.2e-4089.89Show/hide
Query:  MKKLFFFTFLLCFLLFTSSFIDIVIAKPVFCDRKCKKRCSKAGVKDRCIKYCGICCGFCKCVPSGTYGNKHECPCYRDMKSSKGRPKCP
        MKKLFFFTFLL FLL TSSFIDIVIA PVFC +KCKKRCSKAGV DRCIKYCGICCG+CKCVPSGTYGNKHECPCYRDM+SSKG+PKCP
Subjt:  MKKLFFFTFLLCFLLFTSSFIDIVIAKPVFCDRKCKKRCSKAGVKDRCIKYCGICCGFCKCVPSGTYGNKHECPCYRDMKSSKGRPKCP

TrEMBL top hitse value%identityAlignment
A0A0A0KV42 Uncharacterized protein1.1e-4194.25Show/hide
Query:  MKKLFFFTFLLCFLLFTSSFIDIVIAKPVFCDRKCKKRCSKAGVKDRCIKYCGICCGFCKCVPSGTYGNKHECPCYRDMKSSKGRPK
        MKKLF FTFLLCFLLFTSSFIDIV AKPVFCD+KCKKRCSKAGVKDRCIKYCGICCG+CKCVPSGTYGNKHECPCYRDM+SSKGRPK
Subjt:  MKKLFFFTFLLCFLLFTSSFIDIVIAKPVFCDRKCKKRCSKAGVKDRCIKYCGICCGFCKCVPSGTYGNKHECPCYRDMKSSKGRPK

A0A2C9VJ65 Uncharacterized protein1.7e-3173.56Show/hide
Query:  KLFFFTFLLCFLLFTSSFIDIVIAKPVFCDRKCKKRCSKAGVKDRCIKYCGICCGFCKCVPSGTYGNKHECPCYRDMKSSKGRPKCP
        +LFF T LLC LL +SSF++ VIAK  +C+ KCK+RC+KAGVK+RCIKYCGICC  CKCVPSGTYGNKH+CPCYRD K+SKG+PKCP
Subjt:  KLFFFTFLLCFLLFTSSFIDIVIAKPVFCDRKCKKRCSKAGVKDRCIKYCGICCGFCKCVPSGTYGNKHECPCYRDMKSSKGRPKCP

A0A5D3E0A6 Peamaclein-like7.4e-4392.13Show/hide
Query:  MKKLFFFTFLLCFLLFTSSFIDIVIAKPVFCDRKCKKRCSKAGVKDRCIKYCGICCGFCKCVPSGTYGNKHECPCYRDMKSSKGRPKCP
        MKKLFFFTFLLCFLLFTSSFID V AKPVFCD+KCKKRCS+AGVKDRC+KYCGICCG+CKCVPSGTYGNKHECPCYRDM+SSKGRPKCP
Subjt:  MKKLFFFTFLLCFLLFTSSFIDIVIAKPVFCDRKCKKRCSKAGVKDRCIKYCGICCGFCKCVPSGTYGNKHECPCYRDMKSSKGRPKCP

A0A6J1D7V8 peamaclein-like2.6e-4088.76Show/hide
Query:  MKKLFFFTFLLCFLLFTSSFIDIVIAKPVFCDRKCKKRCSKAGVKDRCIKYCGICCGFCKCVPSGTYGNKHECPCYRDMKSSKGRPKCP
        MKKLFF T LLCFLLFTSSFI+IVIAK VFCD++CKKRCSKAGV DRCIKYCGICCG+CKCVPSGTYGNKHECPCYRDM+SSKG+PKCP
Subjt:  MKKLFFFTFLLCFLLFTSSFIDIVIAKPVFCDRKCKKRCSKAGVKDRCIKYCGICCGFCKCVPSGTYGNKHECPCYRDMKSSKGRPKCP

B9HS89 Uncharacterized protein1.3e-3171.91Show/hide
Query:  MKKLFFFTFLLCFLLFTSSFIDIVIAKPVFCDRKCKKRCSKAGVKDRCIKYCGICCGFCKCVPSGTYGNKHECPCYRDMKSSKGRPKCP
        MKKLFF T LLC LLF+SSF++ V+AK  FC +KC+ RC+ AG++DRC+KYCGICC  CKCVPSGTYGNKHECPCYRD ++SKG+PKCP
Subjt:  MKKLFFFTFLLCFLLFTSSFIDIVIAKPVFCDRKCKKRCSKAGVKDRCIKYCGICCGFCKCVPSGTYGNKHECPCYRDMKSSKGRPKCP

SwissProt top hitse value%identityAlignment
O80641 Gibberellin-regulated protein 82.2e-2056.32Show/hide
Query:  KLFFFTFLLCFLLFTSSFIDIVIAKPVFCDRKCKKRCSKAGVKDRCIKYCGICCGFCKCVPSGTYGNKHECPCYRDMKSSKGRPKCP
        KL    F +  LL TSSF  ++ +    C  KC  RCSKAG  + C+KYC ICC  C CVPSGT+G+K ECPCYRDMK+SKG  KCP
Subjt:  KLFFFTFLLCFLLFTSSFIDIVIAKPVFCDRKCKKRCSKAGVKDRCIKYCGICCGFCKCVPSGTYGNKHECPCYRDMKSSKGRPKCP

O82328 Gibberellin-regulated protein 73.7e-2373.33Show/hide
Query:  FCDRKCKKRCSKAGVKDRCIKYCGICCGFCKCVPSGTYGNKHECPCYRDMKSSKGRPKCP
        +C +KC+ RC +AG+KDRC+KYCGICC  C+CVPSGTYGNKHEC CYRD  SSKG PKCP
Subjt:  FCDRKCKKRCSKAGVKDRCIKYCGICCGFCKCVPSGTYGNKHECPCYRDMKSSKGRPKCP

P86888 Peamaclein2.5e-2476.67Show/hide
Query:  FCDRKCKKRCSKAGVKDRCIKYCGICCGFCKCVPSGTYGNKHECPCYRDMKSSKGRPKCP
        FCD KC  RCSKAG ++RC+KYCGICC  C CVPSGTYGNK ECPCYRD+K+SKG PKCP
Subjt:  FCDRKCKKRCSKAGVKDRCIKYCGICCGFCKCVPSGTYGNKHECPCYRDMKSSKGRPKCP

Q8LFM2 Gibberellin-regulated protein 101.5e-2162.96Show/hide
Query:  LLCFLLFTSSFIDIVIAKPVFCDRKCKKRCSKAGVKDRCIKYCGICCGFCK-CVPSGTYGNKHECPCYRDMKSSKGRPKCP
        L+  LL TSS   +  A    C  KC  RCSKAG +DRC+KYC ICC  C  CVPSGTYGNK ECPCYRDMK+SKG  KCP
Subjt:  LLCFLLFTSSFIDIVIAKPVFCDRKCKKRCSKAGVKDRCIKYCGICCGFCK-CVPSGTYGNKHECPCYRDMKSSKGRPKCP

Q948Z4 Snakin-12.6e-2968.97Show/hide
Query:  KLFFFTFLLCFLLFTSSFIDIVIAKPVFCDRKCKKRCSKAGVKDRCIKYCGICCGFCKCVPSGTYGNKHECPCYRDMKSSKGRPKCP
        KLF  T LL  L+ T S I   +A   FCD KCK RCSKAG+ DRC+KYCGICC  CKCVPSGTYGNKHECPCYRD K+SKG+ KCP
Subjt:  KLFFFTFLLCFLLFTSSFIDIVIAKPVFCDRKCKKRCSKAGVKDRCIKYCGICCGFCKCVPSGTYGNKHECPCYRDMKSSKGRPKCP

Arabidopsis top hitse value%identityAlignment
AT1G10588.1 Gibberellin-regulated family protein2.5e-1954.44Show/hide
Query:  MKKLFFFTFLLCFLLFTSSFIDIVIAKPVFCDRKCKKRCSKAG-VKDRCIKYCGICCGFCKCVPSGTYGNKHECPCYRDMKSSKGRPKCP
        MK      F +  LL TSSF  +  A    C  KC  RCSKA    + C++ C ICC  C CVPSGTYGNK ECPCYRDMK+SKG  KCP
Subjt:  MKKLFFFTFLLCFLLFTSSFIDIVIAKPVFCDRKCKKRCSKAG-VKDRCIKYCGICCGFCKCVPSGTYGNKHECPCYRDMKSSKGRPKCP

AT1G10588.2 Gibberellin-regulated family protein2.8e-1853.33Show/hide
Query:  MKKLFFFTFLLCFLLFTSSFIDIVIAKPVFCDRKCKKRCSKAG-VKDRCIKYCGICCGFCKCVPSGTYGNKHECPCYRDMKSSKGRPKCP
        MK      F +  LL TSSF  ++ +    C  KC  RCSKA    + C++ C ICC  C CVPSGTYGNK ECPCYRDMK+SKG  KCP
Subjt:  MKKLFFFTFLLCFLLFTSSFIDIVIAKPVFCDRKCKKRCSKAG-VKDRCIKYCGICCGFCKCVPSGTYGNKHECPCYRDMKSSKGRPKCP

AT2G14900.1 Gibberellin-regulated family protein2.6e-2473.33Show/hide
Query:  FCDRKCKKRCSKAGVKDRCIKYCGICCGFCKCVPSGTYGNKHECPCYRDMKSSKGRPKCP
        +C +KC+ RC +AG+KDRC+KYCGICC  C+CVPSGTYGNKHEC CYRD  SSKG PKCP
Subjt:  FCDRKCKKRCSKAGVKDRCIKYCGICCGFCKCVPSGTYGNKHECPCYRDMKSSKGRPKCP

AT2G39540.1 Gibberellin-regulated family protein1.6e-2156.32Show/hide
Query:  KLFFFTFLLCFLLFTSSFIDIVIAKPVFCDRKCKKRCSKAGVKDRCIKYCGICCGFCKCVPSGTYGNKHECPCYRDMKSSKGRPKCP
        KL    F +  LL TSSF  ++ +    C  KC  RCSKAG  + C+KYC ICC  C CVPSGT+G+K ECPCYRDMK+SKG  KCP
Subjt:  KLFFFTFLLCFLLFTSSFIDIVIAKPVFCDRKCKKRCSKAGVKDRCIKYCGICCGFCKCVPSGTYGNKHECPCYRDMKSSKGRPKCP

AT5G59845.1 Gibberellin-regulated family protein1.1e-2262.96Show/hide
Query:  LLCFLLFTSSFIDIVIAKPVFCDRKCKKRCSKAGVKDRCIKYCGICCGFCK-CVPSGTYGNKHECPCYRDMKSSKGRPKCP
        L+  LL TSS   +  A    C  KC  RCSKAG +DRC+KYC ICC  C  CVPSGTYGNK ECPCYRDMK+SKG  KCP
Subjt:  LLCFLLFTSSFIDIVIAKPVFCDRKCKKRCSKAGVKDRCIKYCGICCGFCK-CVPSGTYGNKHECPCYRDMKSSKGRPKCP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAGCTTTTCTTCTTCACATTCTTGCTTTGCTTCCTTCTCTTCACTTCTTCCTTCATAGACATTGTCATTGCCAAGCCCGTGTTTTGTGACAGAAAGTGCAAGAA
GAGATGCTCAAAGGCAGGAGTGAAGGATAGATGCATAAAGTATTGTGGGATTTGCTGTGGGTTTTGCAAGTGTGTTCCTTCTGGGACTTATGGGAACAAGCATGAGTGCC
CTTGCTATAGGGACATGAAGAGCTCTAAGGGTAGGCCCAAGTGCCCTTGA
mRNA sequenceShow/hide mRNA sequence
GAACAAACTACTCACTCTAATAAATACCTCCCACAAAATGCTCAATTAATCCTCAAATATTGTGTTTCAATATTCTTCTCTCTCACCAGCAGTACTAGATCAGATGAAGA
AGCTTTTCTTCTTCACATTCTTGCTTTGCTTCCTTCTCTTCACTTCTTCCTTCATAGACATTGTCATTGCCAAGCCCGTGTTTTGTGACAGAAAGTGCAAGAAGAGATGC
TCAAAGGCAGGAGTGAAGGATAGATGCATAAAGTATTGTGGGATTTGCTGTGGGTTTTGCAAGTGTGTTCCTTCTGGGACTTATGGGAACAAGCATGAGTGCCCTTGCTA
TAGGGACATGAAGAGCTCTAAGGGTAGGCCCAAGTGCCCTTGAGATTTGAAATATGGCTCTT
Protein sequenceShow/hide protein sequence
MKKLFFFTFLLCFLLFTSSFIDIVIAKPVFCDRKCKKRCSKAGVKDRCIKYCGICCGFCKCVPSGTYGNKHECPCYRDMKSSKGRPKCP