| GenBank top hits | e value | %identity | Alignment |
|---|
| XP_022142704.1 DNA-directed RNA polymerases II and IV subunit 5A [Momordica charantia] | 6.1e-103 | 95.63 | Show/hide |
Query: MVLSEEEITRLFRVRKTVMQMLKDRGYFVGDFEIDMSREQFRNKYGESMKREDLVINKAKRNSSSDQIYIFFPEEPKVGVKTMKTYTNRMKSENVFRAIL
MVL++EEITRLFR+RKTV+QMLKDRGYFVGDFEI MSREQFRNKYGESMKREDLVINKAKRN SSDQIYIFFPEE KVGVKTMKTYTNRMKSENVFRAIL
Subjt: MVLSEEEITRLFRVRKTVMQMLKDRGYFVGDFEIDMSREQFRNKYGESMKREDLVINKAKRNSSSDQIYIFFPEEPKVGVKTMKTYTNRMKSENVFRAIL
Query: VVQQNLTPFARTCISEISSKFHLEVFQEAELMVNIKDHVLIPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPIARYYGLKRGQVVKIIRPSETAGRYV
VVQQNLTPFARTCI EISSKFHLEVFQEAELMVNIKDHVLIPEHQLLT EEKKTLLERYTVKETQLPRIQVTDPIARYYGLKRGQVVKIIRPSETAGRYV
Subjt: VVQQNLTPFARTCISEISSKFHLEVFQEAELMVNIKDHVLIPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPIARYYGLKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYRYVV
Subjt: TYRYVV
|
|
| XP_022953770.1 DNA-directed RNA polymerases II and IV subunit 5A-like [Cucurbita moschata] | 3.6e-103 | 93.69 | Show/hide |
Query: MVLSEEEITRLFRVRKTVMQMLKDRGYFVGDFEIDMSREQFRNKYGESMKREDLVINKAKRNSSSDQIYIFFPEEPKVGVKTMKTYTNRMKSENVFRAIL
MVLSEEEITRLFR+RKTV+QMLKDRGYFVGDFEIDMSREQF++KYGESMKRED+VINKAKRN SSDQIY+FFPEE KVGVKTMKTYTNRMK+ENVFRAIL
Subjt: MVLSEEEITRLFRVRKTVMQMLKDRGYFVGDFEIDMSREQFRNKYGESMKREDLVINKAKRNSSSDQIYIFFPEEPKVGVKTMKTYTNRMKSENVFRAIL
Query: VVQQNLTPFARTCISEISSKFHLEVFQEAELMVNIKDHVLIPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPIARYYGLKRGQVVKIIRPSETAGRYV
VVQQNLTPFARTCISEISSKFHLEVFQEAEL+VN+KDHVL+PEHQLLTNEEKKTLLERYTVKETQLPRIQVTDP+ARYYGLKRGQVVKIIRPSETAGRYV
Subjt: VVQQNLTPFARTCISEISSKFHLEVFQEAELMVNIKDHVLIPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPIARYYGLKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYRYVV
Subjt: TYRYVV
|
|
| XP_022955185.1 DNA-directed RNA polymerases II and IV subunit 5A-like [Cucurbita moschata] | 8.0e-103 | 94.17 | Show/hide |
Query: MVLSEEEITRLFRVRKTVMQMLKDRGYFVGDFEIDMSREQFRNKYGESMKREDLVINKAKRNSSSDQIYIFFPEEPKVGVKTMKTYTNRMKSENVFRAIL
MVLSEEEITRLFR+RKT+MQMLKDRGY+VGD +IDMSR QFRNKYG++MKREDLVINKA RN+SSDQIYIFFPEEPKVGVKTMKTYTNRMKSENVFRAIL
Subjt: MVLSEEEITRLFRVRKTVMQMLKDRGYFVGDFEIDMSREQFRNKYGESMKREDLVINKAKRNSSSDQIYIFFPEEPKVGVKTMKTYTNRMKSENVFRAIL
Query: VVQQNLTPFARTCISEISSKFHLEVFQEAELMVNIKDHVLIPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPIARYYGLKRGQVVKIIRPSETAGRYV
VVQQNLTPFARTCISEISSKFHLEVFQEAELMVN+KDHVLIPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPIARYYGLKRGQV+KIIRPSETAGRYV
Subjt: VVQQNLTPFARTCISEISSKFHLEVFQEAELMVNIKDHVLIPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPIARYYGLKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYRYVV
Subjt: TYRYVV
|
|
| XP_022959553.1 DNA-directed RNA polymerases II and IV subunit 5A-like [Cucurbita moschata] | 3.2e-104 | 94.66 | Show/hide |
Query: MVLSEEEITRLFRVRKTVMQMLKDRGYFVGDFEIDMSREQFRNKYGESMKREDLVINKAKRNSSSDQIYIFFPEEPKVGVKTMKTYTNRMKSENVFRAIL
MVL+EEEITRLFRVRKTV+QMLKDRGYFVGDFE+DMSREQF+NKYGESMKRED+VINKAKRN SSDQIYIFFPEEPKVGVKTMKTYTNRMKSENVFRAIL
Subjt: MVLSEEEITRLFRVRKTVMQMLKDRGYFVGDFEIDMSREQFRNKYGESMKREDLVINKAKRNSSSDQIYIFFPEEPKVGVKTMKTYTNRMKSENVFRAIL
Query: VVQQNLTPFARTCISEISSKFHLEVFQEAELMVNIKDHVLIPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPIARYYGLKRGQVVKIIRPSETAGRYV
VVQQNLTPFARTCISEIS+KFHLEVFQEAEL+VNIKDHVL+PEHQLL+NEEKKTLLERYTVKETQLPRIQVTDP+ARYYGLKRGQVVKIIRPSETAGRYV
Subjt: VVQQNLTPFARTCISEISSKFHLEVFQEAELMVNIKDHVLIPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPIARYYGLKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYRYVV
Subjt: TYRYVV
|
|
| XP_022991826.1 DNA-directed RNA polymerases II and IV subunit 5A-like [Cucurbita maxima] | 2.7e-103 | 93.69 | Show/hide |
Query: MVLSEEEITRLFRVRKTVMQMLKDRGYFVGDFEIDMSREQFRNKYGESMKREDLVINKAKRNSSSDQIYIFFPEEPKVGVKTMKTYTNRMKSENVFRAIL
MVLSEEEITRLFR+RKTV+QMLKDRGYFVGDFEIDMSREQF++KYGESMKRED+VINKAKRN SSDQIY+FFPEE KVGVKTMKTYTNRMK+ENVFRAIL
Subjt: MVLSEEEITRLFRVRKTVMQMLKDRGYFVGDFEIDMSREQFRNKYGESMKREDLVINKAKRNSSSDQIYIFFPEEPKVGVKTMKTYTNRMKSENVFRAIL
Query: VVQQNLTPFARTCISEISSKFHLEVFQEAELMVNIKDHVLIPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPIARYYGLKRGQVVKIIRPSETAGRYV
VVQQNLTPFARTCISEISSKFHLEVFQEAEL+VN+KDHVL+PEHQLLTNEEKKTLLERYTVKETQLPRIQVTDP+ARYYGLKRGQVVKIIRPSETAGRYV
Subjt: VVQQNLTPFARTCISEISSKFHLEVFQEAELMVNIKDHVLIPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPIARYYGLKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYRYVV
Subjt: TYRYVV
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A6J1CLP6 DNA-directed RNA polymerases II and IV subunit 5A | 3.0e-103 | 95.63 | Show/hide |
Query: MVLSEEEITRLFRVRKTVMQMLKDRGYFVGDFEIDMSREQFRNKYGESMKREDLVINKAKRNSSSDQIYIFFPEEPKVGVKTMKTYTNRMKSENVFRAIL
MVL++EEITRLFR+RKTV+QMLKDRGYFVGDFEI MSREQFRNKYGESMKREDLVINKAKRN SSDQIYIFFPEE KVGVKTMKTYTNRMKSENVFRAIL
Subjt: MVLSEEEITRLFRVRKTVMQMLKDRGYFVGDFEIDMSREQFRNKYGESMKREDLVINKAKRNSSSDQIYIFFPEEPKVGVKTMKTYTNRMKSENVFRAIL
Query: VVQQNLTPFARTCISEISSKFHLEVFQEAELMVNIKDHVLIPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPIARYYGLKRGQVVKIIRPSETAGRYV
VVQQNLTPFARTCI EISSKFHLEVFQEAELMVNIKDHVLIPEHQLLT EEKKTLLERYTVKETQLPRIQVTDPIARYYGLKRGQVVKIIRPSETAGRYV
Subjt: VVQQNLTPFARTCISEISSKFHLEVFQEAELMVNIKDHVLIPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPIARYYGLKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYRYVV
Subjt: TYRYVV
|
|
| A0A6J1GQK9 DNA-directed RNA polymerases II and IV subunit 5A-like | 1.7e-103 | 93.69 | Show/hide |
Query: MVLSEEEITRLFRVRKTVMQMLKDRGYFVGDFEIDMSREQFRNKYGESMKREDLVINKAKRNSSSDQIYIFFPEEPKVGVKTMKTYTNRMKSENVFRAIL
MVLSEEEITRLFR+RKTV+QMLKDRGYFVGDFEIDMSREQF++KYGESMKRED+VINKAKRN SSDQIY+FFPEE KVGVKTMKTYTNRMK+ENVFRAIL
Subjt: MVLSEEEITRLFRVRKTVMQMLKDRGYFVGDFEIDMSREQFRNKYGESMKREDLVINKAKRNSSSDQIYIFFPEEPKVGVKTMKTYTNRMKSENVFRAIL
Query: VVQQNLTPFARTCISEISSKFHLEVFQEAELMVNIKDHVLIPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPIARYYGLKRGQVVKIIRPSETAGRYV
VVQQNLTPFARTCISEISSKFHLEVFQEAEL+VN+KDHVL+PEHQLLTNEEKKTLLERYTVKETQLPRIQVTDP+ARYYGLKRGQVVKIIRPSETAGRYV
Subjt: VVQQNLTPFARTCISEISSKFHLEVFQEAELMVNIKDHVLIPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPIARYYGLKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYRYVV
Subjt: TYRYVV
|
|
| A0A6J1H699 DNA-directed RNA polymerases II and IV subunit 5A-like | 1.6e-104 | 94.66 | Show/hide |
Query: MVLSEEEITRLFRVRKTVMQMLKDRGYFVGDFEIDMSREQFRNKYGESMKREDLVINKAKRNSSSDQIYIFFPEEPKVGVKTMKTYTNRMKSENVFRAIL
MVL+EEEITRLFRVRKTV+QMLKDRGYFVGDFE+DMSREQF+NKYGESMKRED+VINKAKRN SSDQIYIFFPEEPKVGVKTMKTYTNRMKSENVFRAIL
Subjt: MVLSEEEITRLFRVRKTVMQMLKDRGYFVGDFEIDMSREQFRNKYGESMKREDLVINKAKRNSSSDQIYIFFPEEPKVGVKTMKTYTNRMKSENVFRAIL
Query: VVQQNLTPFARTCISEISSKFHLEVFQEAELMVNIKDHVLIPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPIARYYGLKRGQVVKIIRPSETAGRYV
VVQQNLTPFARTCISEIS+KFHLEVFQEAEL+VNIKDHVL+PEHQLL+NEEKKTLLERYTVKETQLPRIQVTDP+ARYYGLKRGQVVKIIRPSETAGRYV
Subjt: VVQQNLTPFARTCISEISSKFHLEVFQEAELMVNIKDHVLIPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPIARYYGLKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYRYVV
Subjt: TYRYVV
|
|
| A0A6J1JRV4 DNA-directed RNA polymerases II and IV subunit 5A-like | 1.3e-103 | 93.69 | Show/hide |
Query: MVLSEEEITRLFRVRKTVMQMLKDRGYFVGDFEIDMSREQFRNKYGESMKREDLVINKAKRNSSSDQIYIFFPEEPKVGVKTMKTYTNRMKSENVFRAIL
MVLSEEEITRLFR+RKTV+QMLKDRGYFVGDFEIDMSREQF++KYGESMKRED+VINKAKRN SSDQIY+FFPEE KVGVKTMKTYTNRMK+ENVFRAIL
Subjt: MVLSEEEITRLFRVRKTVMQMLKDRGYFVGDFEIDMSREQFRNKYGESMKREDLVINKAKRNSSSDQIYIFFPEEPKVGVKTMKTYTNRMKSENVFRAIL
Query: VVQQNLTPFARTCISEISSKFHLEVFQEAELMVNIKDHVLIPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPIARYYGLKRGQVVKIIRPSETAGRYV
VVQQNLTPFARTCISEISSKFHLEVFQEAEL+VN+KDHVL+PEHQLLTNEEKKTLLERYTVKETQLPRIQVTDP+ARYYGLKRGQVVKIIRPSETAGRYV
Subjt: VVQQNLTPFARTCISEISSKFHLEVFQEAELMVNIKDHVLIPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPIARYYGLKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYRYVV
Subjt: TYRYVV
|
|
| A0A6J1KT45 DNA-directed RNA polymerases II and IV subunit 5A-like | 1.6e-104 | 94.66 | Show/hide |
Query: MVLSEEEITRLFRVRKTVMQMLKDRGYFVGDFEIDMSREQFRNKYGESMKREDLVINKAKRNSSSDQIYIFFPEEPKVGVKTMKTYTNRMKSENVFRAIL
MVL+EEEITRLFRVRKTV+QMLKDRGYFVGDFE+DMSREQF+NKYGESMKRED+VINKAKRN SSDQIYIFFPEEPKVGVKTMKTYTNRMKSENVFRAIL
Subjt: MVLSEEEITRLFRVRKTVMQMLKDRGYFVGDFEIDMSREQFRNKYGESMKREDLVINKAKRNSSSDQIYIFFPEEPKVGVKTMKTYTNRMKSENVFRAIL
Query: VVQQNLTPFARTCISEISSKFHLEVFQEAELMVNIKDHVLIPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPIARYYGLKRGQVVKIIRPSETAGRYV
VVQQNLTPFARTCISEIS+KFHLEVFQEAEL+VNIKDHVL+PEHQLL+NEEKKTLLERYTVKETQLPRIQVTDP+ARYYGLKRGQVVKIIRPSETAGRYV
Subjt: VVQQNLTPFARTCISEISSKFHLEVFQEAELMVNIKDHVLIPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPIARYYGLKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYRYVV
Subjt: TYRYVV
|
|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| B0BNE2 DNA-directed RNA polymerases I, II, and III subunit RPABC1 | 5.3e-57 | 51.94 | Show/hide |
Query: EEEITRLFRVRKTVMQMLKDRGYFVGDFEIDMSREQFRNKYGES-----MKREDLVINKAKRNSSSDQIYIFFPEEPKVGVKTMKTYTNRMKSENVFRAI
EEE RL+++RKT+MQ+ DRGY V E+D + E+F+ ++G+ +R DL + A + +DQ+++FFPEEPKVG+KT+K Y RM+ EN+ RA+
Subjt: EEEITRLFRVRKTVMQMLKDRGYFVGDFEIDMSREQFRNKYGES-----MKREDLVINKAKRNSSSDQIYIFFPEEPKVGVKTMKTYTNRMKSENVFRAI
Query: LVVQQNLTPFARTCISEISSKFHLEVFQEAELMVNIKDHVLIPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPIARYYGLKRGQVVKIIRPSETAGRY
+VVQQ +TP A+ + +++ K+ LE F + EL++NI +H L+PEH ++T EE LL RY ++E+QLPRIQ DP+ARY+G+KRGQVVKIIRPSETAGRY
Subjt: LVVQQNLTPFARTCISEISSKFHLEVFQEAELMVNIKDHVLIPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPIARYYGLKRGQVVKIIRPSETAGRY
Query: VTYRYV
+TYR V
Subjt: VTYRYV
|
|
| O81098 DNA-directed RNA polymerases II and IV subunit 5A | 1.3e-92 | 81.95 | Show/hide |
Query: VLSEEEITRLFRVRKTVMQMLKDRGYFVGDFEIDMSREQFRNKYGESMKREDLVINKAKRNSSSDQIYIFFPEEPKVGVKTMKTYTNRMKSENVFRAILV
+L+EEE+ RL+R++KT+MQML+DRGYF+ D E+ M+++QF K+G++MKREDLV KAKRN +SDQ+YIFFP+E KVGVKTMK YTNRMKSENVFRAILV
Subjt: VLSEEEITRLFRVRKTVMQMLKDRGYFVGDFEIDMSREQFRNKYGESMKREDLVINKAKRNSSSDQIYIFFPEEPKVGVKTMKTYTNRMKSENVFRAILV
Query: VQQNLTPFARTCISEISSKFHLEVFQEAELMVNIKDHVLIPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPIARYYGLKRGQVVKIIRPSETAGRYVT
VQQNLTPFARTCISEISSKFHLEVFQEAE++VNIK+HVL+PEHQ+LT EEKKTLLERYTVKETQLPRIQVTDPIARY+GLKRGQVVKIIRPSETAGRYVT
Subjt: VQQNLTPFARTCISEISSKFHLEVFQEAELMVNIKDHVLIPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPIARYYGLKRGQVVKIIRPSETAGRYVT
Query: YRYVV
YRYVV
Subjt: YRYVV
|
|
| P19388 DNA-directed RNA polymerases I, II, and III subunit RPABC1 | 2.6e-56 | 51.94 | Show/hide |
Query: EEEITRLFRVRKTVMQMLKDRGYFVGDFEIDMSREQFRNKYGES-----MKREDLVINKAKRNSSSDQIYIFFPEEPKVGVKTMKTYTNRMKSENVFRAI
EEE RL+++RKT+MQ+ DRGY V E+D + E+F+ + G+ +R DL + A + +DQ+++FFPEEPKVG+KT+K Y RM+ EN+ RA+
Subjt: EEEITRLFRVRKTVMQMLKDRGYFVGDFEIDMSREQFRNKYGES-----MKREDLVINKAKRNSSSDQIYIFFPEEPKVGVKTMKTYTNRMKSENVFRAI
Query: LVVQQNLTPFARTCISEISSKFHLEVFQEAELMVNIKDHVLIPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPIARYYGLKRGQVVKIIRPSETAGRY
+VVQQ +TP A+ + +++ K+ LE F + EL++NI +H L+PEH ++T EE LL RY ++E QLPRIQ DP+ARY+G+KRGQVVKIIRPSETAGRY
Subjt: LVVQQNLTPFARTCISEISSKFHLEVFQEAELMVNIKDHVLIPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPIARYYGLKRGQVVKIIRPSETAGRY
Query: VTYRYV
+TYR V
Subjt: VTYRYV
|
|
| Q5R587 DNA-directed RNA polymerases I, II, and III subunit RPABC1 | 3.1e-57 | 52.43 | Show/hide |
Query: EEEITRLFRVRKTVMQMLKDRGYFVGDFEIDMSREQFRNKYGES-----MKREDLVINKAKRNSSSDQIYIFFPEEPKVGVKTMKTYTNRMKSENVFRAI
EEE RL+++RKT+MQ+ DRGY V E+D + E+FR ++G+ +R DL + A + +DQ+++FFPEEPKVG+KT+K Y RM+ EN+ RA+
Subjt: EEEITRLFRVRKTVMQMLKDRGYFVGDFEIDMSREQFRNKYGES-----MKREDLVINKAKRNSSSDQIYIFFPEEPKVGVKTMKTYTNRMKSENVFRAI
Query: LVVQQNLTPFARTCISEISSKFHLEVFQEAELMVNIKDHVLIPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPIARYYGLKRGQVVKIIRPSETAGRY
+VVQQ +TP A+ + +++ K+ LE F + EL++NI +H L+PEH ++T EE LL RY ++E QLPRIQ DP+ARY+G+KRGQVVKIIRPSETAGRY
Subjt: LVVQQNLTPFARTCISEISSKFHLEVFQEAELMVNIKDHVLIPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPIARYYGLKRGQVVKIIRPSETAGRY
Query: VTYRYV
+TYR V
Subjt: VTYRYV
|
|
| Q80UW8 DNA-directed RNA polymerases I, II, and III subunit RPABC1 | 5.3e-57 | 51.94 | Show/hide |
Query: EEEITRLFRVRKTVMQMLKDRGYFVGDFEIDMSREQFRNKYGES-----MKREDLVINKAKRNSSSDQIYIFFPEEPKVGVKTMKTYTNRMKSENVFRAI
EEE RL+++RKT+MQ+ DRGY V E+D + E+F+ ++G+ +R DL + A + +DQ+++FFPEEPKVG+KT+K Y RM+ EN+ RA+
Subjt: EEEITRLFRVRKTVMQMLKDRGYFVGDFEIDMSREQFRNKYGES-----MKREDLVINKAKRNSSSDQIYIFFPEEPKVGVKTMKTYTNRMKSENVFRAI
Query: LVVQQNLTPFARTCISEISSKFHLEVFQEAELMVNIKDHVLIPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPIARYYGLKRGQVVKIIRPSETAGRY
+VVQQ +TP A+ + +++ K+ LE F + EL++NI +H L+PEH ++T EE LL RY ++E+QLPRIQ DP+ARY+G+KRGQVVKIIRPSETAGRY
Subjt: LVVQQNLTPFARTCISEISSKFHLEVFQEAELMVNIKDHVLIPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPIARYYGLKRGQVVKIIRPSETAGRY
Query: VTYRYV
+TYR V
Subjt: VTYRYV
|
|
| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT2G41340.1 RNA polymerase II fifth largest subunit, D | 2.7e-32 | 39.41 | Show/hide |
Query: SEEEITRLFRVRKTVMQMLKDRGYFVGDFEIDMSREQFRNKYGESMKREDLVINKAKRNSSSDQIYIFFPEEPKVGVKTMKTY-TNRMKSENVFRAILVV
S E + + R+T M+ML+DRGY V D +I++S +QFR YGE + L I+ R SS +I + F V V M+ + + EN+ ILV+
Subjt: SEEEITRLFRVRKTVMQMLKDRGYFVGDFEIDMSREQFRNKYGESMKREDLVINKAKRNSSSDQIYIFFPEEPKVGVKTMKTY-TNRMKSENVFRAILVV
Query: QQNLTPFARTCISEISSKFHLEVFQEAELMVNIKDHVLIPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPIARYYGLKRGQVVKIIRPSETAGRYVTY
Q ++T A + S F +E+F+ +L+VN+ HVL P+HQ+L ++EK++LL++++++E QLPR+ DPI RYYGL+ GQV+K+ E + +VTY
Subjt: QQNLTPFARTCISEISSKFHLEVFQEAELMVNIKDHVLIPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPIARYYGLKRGQVVKIIRPSETAGRYVTY
Query: RYV
R V
Subjt: RYV
|
|
| AT3G22320.1 Eukaryotic rpb5 RNA polymerase subunit family protein | 9.4e-94 | 81.95 | Show/hide |
Query: VLSEEEITRLFRVRKTVMQMLKDRGYFVGDFEIDMSREQFRNKYGESMKREDLVINKAKRNSSSDQIYIFFPEEPKVGVKTMKTYTNRMKSENVFRAILV
+L+EEE+ RL+R++KT+MQML+DRGYF+ D E+ M+++QF K+G++MKREDLV KAKRN +SDQ+YIFFP+E KVGVKTMK YTNRMKSENVFRAILV
Subjt: VLSEEEITRLFRVRKTVMQMLKDRGYFVGDFEIDMSREQFRNKYGESMKREDLVINKAKRNSSSDQIYIFFPEEPKVGVKTMKTYTNRMKSENVFRAILV
Query: VQQNLTPFARTCISEISSKFHLEVFQEAELMVNIKDHVLIPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPIARYYGLKRGQVVKIIRPSETAGRYVT
VQQNLTPFARTCISEISSKFHLEVFQEAE++VNIK+HVL+PEHQ+LT EEKKTLLERYTVKETQLPRIQVTDPIARY+GLKRGQVVKIIRPSETAGRYVT
Subjt: VQQNLTPFARTCISEISSKFHLEVFQEAELMVNIKDHVLIPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPIARYYGLKRGQVVKIIRPSETAGRYVT
Query: YRYVV
YRYVV
Subjt: YRYVV
|
|
| AT3G54490.1 RNA polymerase II fifth largest subunit, E | 1.9e-25 | 33.33 | Show/hide |
Query: EITRLFRVRKTVMQMLKDRGYFVGDFEIDMSREQFRNKYGESMKREDLVINKAKRNSSSDQIYIFFPEEPKVGVKTMKTYTNRMKSE-NVFRAILVVQQN
E R + R T +ML+DRGY V + E+ ++ +FR+ +GE + E L I R+ +I + F + VK+++ ++ + + ILV+Q
Subjt: EITRLFRVRKTVMQMLKDRGYFVGDFEIDMSREQFRNKYGESMKREDLVINKAKRNSSSDQIYIFFPEEPKVGVKTMKTYTNRMKSE-NVFRAILVVQQN
Query: LTPFARTCISEISSKFHLEVFQEAELMVNIKDHVLIPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPIARYYGLKRGQVVKIIRPSETAGRYVTYRYV
+ FA+ ++ + F +E F +L+VNI H+ P+ ++L EEK+ LL ++ +++ QLP +Q D RYYGLK+ QVVKI E G +VTYR +
Subjt: LTPFARTCISEISSKFHLEVFQEAELMVNIKDHVLIPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPIARYYGLKRGQVVKIIRPSETAGRYVTYRYV
Query: V
+
Subjt: V
|
|
| AT3G57080.1 Eukaryotic rpb5 RNA polymerase subunit family protein | 5.1e-31 | 39.71 | Show/hide |
Query: LSEEEITRLFRVRKTVMQMLKDRGYFVGDFEIDMSREQFRNKYGESMKREDLVINKAKRNSSSDQIYIFFPEEPKVGVKTMKT-YTNRMKSENVFRAILV
LS EE R + R+ +QML+DRGY V D +I++S FR YGE + L I+ R+ S+ ++ I F V V +++ + + E + ILV
Subjt: LSEEEITRLFRVRKTVMQMLKDRGYFVGDFEIDMSREQFRNKYGESMKREDLVINKAKRNSSSDQIYIFFPEEPKVGVKTMKT-YTNRMKSENVFRAILV
Query: VQQNLTPFARTCISEISSKFHLEVFQEAELMVNIKDHVLIPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPIARYYGLKRGQVVKIIRPSETAGRYVT
+Q ++T A I S F +E+FQ +L+VNI H L P+HQ+L +EEK TLL++++++E QLPRI D I RYYGL++GQVVK+ E +V
Subjt: VQQNLTPFARTCISEISSKFHLEVFQEAELMVNIKDHVLIPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPIARYYGLKRGQVVKIIRPSETAGRYVT
Query: YRYV
+R V
Subjt: YRYV
|
|
| AT5G57980.1 RNA polymerase II fifth largest subunit, C | 8.6e-47 | 46.6 | Show/hide |
Query: EEEITRLFRVRKTVMQMLKDRGYFVGDFEIDMSREQFRNKYGESM---KREDLVINKAKRNSSSDQIYIFFPEEPKVGVKTM-KTYTNRMKSENVFRAIL
++EITR+F+VR+TV+QML+DRGY + + ++++ RE+F ++ ++M +E L ++ K + +D+IY+F+PE PKVGV + K +M+ + V R I+
Subjt: EEEITRLFRVRKTVMQMLKDRGYFVGDFEIDMSREQFRNKYGESM---KREDLVINKAKRNSSSDQIYIFFPEEPKVGVKTM-KTYTNRMKSENVFRAIL
Query: VVQQNLTPFARTCISEISSKFHLEVFQEAELMVNIKDHVLIPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPIARYYGLKRGQVVKIIRPSETAGRYV
VV +T AR +SE++ +EVF+EAEL+ NI +H L+ ++ +L ++ KK LL YTV++TQLPRI VTDP+ARYYGLKRGQVVKI R T+ Y
Subjt: VVQQNLTPFARTCISEISSKFHLEVFQEAELMVNIKDHVLIPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPIARYYGLKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYR+ V
Subjt: TYRYVV
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