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Tan0003431 (gene) of Snake gourd v1 genome

Gene IDTan0003431
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionprefoldin subunit 6
Genome locationLG03:79859106..79861861
RNA-Seq ExpressionTan0003431
SyntenyTan0003431
Gene Ontology termsGO:0006457 - protein folding (biological process)
GO:0043622 - cortical microtubule organization (biological process)
GO:0051131 - chaperone-mediated protein complex assembly (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0016272 - prefoldin complex (cellular component)
GO:0051082 - unfolded protein binding (molecular function)
GO:0051087 - chaperone binding (molecular function)
InterPro domainsIPR002777 - Prefoldin beta-like
IPR009053 - Prefoldin


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_012457094.1 PREDICTED: prefoldin subunit 6-like [Gossypium raimondii]8.0e-2958.02Show/hide
Query:  MSSFTTLKEELQRDLEN----LRKFQKGIAKNYQVKLKYDTELGESKFVLQELDLLKEDAIVYKLVGPILVKQDPGKPNANVRKRIGHLAAELECIDAII
        MSS +T   +LQ DLEN    L K QK IAKN+QV+ KY  +LGE++ VL+ELDLLKEDA VYKL+GP+LVKQD  + NANVRKRI +++AEL+ +D+ +
Subjt:  MSSFTTLKEELQRDLEN----LRKFQKGIAKNYQVKLKYDTELGESKFVLQELDLLKEDAIVYKLVGPILVKQDPGKPNANVRKRIGHLAAELECIDAII

Query:  RDLGEKKISKREKISKVEQRLRSLELGEREA
        +DL EK+ SKRE I KV+QR++SL+ G+ +A
Subjt:  RDLGEKKISKREKISKVEQRLRSLELGEREA

XP_016724000.1 prefoldin subunit 6 [Gossypium hirsutum]2.3e-2857.25Show/hide
Query:  MSSFTTLKEELQRDLEN----LRKFQKGIAKNYQVKLKYDTELGESKFVLQELDLLKEDAIVYKLVGPILVKQDPGKPNANVRKRIGHLAAELECIDAII
        MSS +T   +LQRDLEN    L K QK IAK++QV+ KY  +LGE++ VL+ELDLL EDA VYKL+GP+LVKQD  + NANVRKRI +++AEL+ +D+ +
Subjt:  MSSFTTLKEELQRDLEN----LRKFQKGIAKNYQVKLKYDTELGESKFVLQELDLLKEDAIVYKLVGPILVKQDPGKPNANVRKRIGHLAAELECIDAII

Query:  RDLGEKKISKREKISKVEQRLRSLELGEREA
        +DL EK+ SKRE I KV+QR++SL+ G+ +A
Subjt:  RDLGEKKISKREKISKVEQRLRSLELGEREA

XP_017978047.1 PREDICTED: prefoldin subunit 6 [Theobroma cacao]2.1e-2959.54Show/hide
Query:  MSSFTTLKEELQRDLEN----LRKFQKGIAKNYQVKLKYDTELGESKFVLQELDLLKEDAIVYKLVGPILVKQDPGKPNANVRKRIGHLAAELECIDAII
        MSS +T   ELQRDLEN    L K QK IAKN+QVK KY  +LGE++ VL+ELDLL EDA VYKL+GP+LVKQD  + NANVRKRI +++AEL+ +DA +
Subjt:  MSSFTTLKEELQRDLEN----LRKFQKGIAKNYQVKLKYDTELGESKFVLQELDLLKEDAIVYKLVGPILVKQDPGKPNANVRKRIGHLAAELECIDAII

Query:  RDLGEKKISKREKISKVEQRLRSLELGEREA
        +DL EK+ SKRE I KV+QR++S + G+ +A
Subjt:  RDLGEKKISKREKISKVEQRLRSLELGEREA

XP_021294362.1 prefoldin subunit 6 [Herrania umbratica]4.7e-2958.78Show/hide
Query:  MSSFTTLKEELQRDLEN----LRKFQKGIAKNYQVKLKYDTELGESKFVLQELDLLKEDAIVYKLVGPILVKQDPGKPNANVRKRIGHLAAELECIDAII
        MSS +T   ELQRDLEN    L K QK IAKN+QV+ KY  +LGE++ VL+ELDLL EDA VYKL+GP+LVKQD  + NANVRKRI +++AEL+ +DA +
Subjt:  MSSFTTLKEELQRDLEN----LRKFQKGIAKNYQVKLKYDTELGESKFVLQELDLLKEDAIVYKLVGPILVKQDPGKPNANVRKRIGHLAAELECIDAII

Query:  RDLGEKKISKREKISKVEQRLRSLELGEREA
        +DL EK+ SKRE I KV+QR++S + G+ +A
Subjt:  RDLGEKKISKREKISKVEQRLRSLELGEREA

XP_022715552.1 prefoldin subunit 6-like isoform X1 [Durio zibethinus]8.0e-2958.78Show/hide
Query:  MSSFTTLKEELQRDLEN----LRKFQKGIAKNYQVKLKYDTELGESKFVLQELDLLKEDAIVYKLVGPILVKQDPGKPNANVRKRIGHLAAELECIDAII
        MSS +T   ELQRDLEN    L K QK IAKN+QV+ KY  +LGE++ VL+ELDLL EDA VYKL+GP+LVKQD  + NANVRKRI +++AE + +DA +
Subjt:  MSSFTTLKEELQRDLEN----LRKFQKGIAKNYQVKLKYDTELGESKFVLQELDLLKEDAIVYKLVGPILVKQDPGKPNANVRKRIGHLAAELECIDAII

Query:  RDLGEKKISKREKISKVEQRLRSLELGEREA
        +DL EKK SKRE I KV+QR++S + G+ +A
Subjt:  RDLGEKKISKREKISKVEQRLRSLELGEREA

TrEMBL top hitse value%identityAlignment
A0A061GKX2 Prefoldin 6 isoform 11.0e-2959.54Show/hide
Query:  MSSFTTLKEELQRDLEN----LRKFQKGIAKNYQVKLKYDTELGESKFVLQELDLLKEDAIVYKLVGPILVKQDPGKPNANVRKRIGHLAAELECIDAII
        MSS +T   ELQRDLEN    L K QK IAKN+QVK KY  +LGE++ VL+ELDLL EDA VYKL+GP+LVKQD  + NANVRKRI +++AEL+ +DA +
Subjt:  MSSFTTLKEELQRDLEN----LRKFQKGIAKNYQVKLKYDTELGESKFVLQELDLLKEDAIVYKLVGPILVKQDPGKPNANVRKRIGHLAAELECIDAII

Query:  RDLGEKKISKREKISKVEQRLRSLELGEREA
        +DL EK+ SKRE I KV+QR++S + G+ +A
Subjt:  RDLGEKKISKREKISKVEQRLRSLELGEREA

A0A0D2UM46 Uncharacterized protein3.9e-2958.02Show/hide
Query:  MSSFTTLKEELQRDLEN----LRKFQKGIAKNYQVKLKYDTELGESKFVLQELDLLKEDAIVYKLVGPILVKQDPGKPNANVRKRIGHLAAELECIDAII
        MSS +T   +LQ DLEN    L K QK IAKN+QV+ KY  +LGE++ VL+ELDLLKEDA VYKL+GP+LVKQD  + NANVRKRI +++AEL+ +D+ +
Subjt:  MSSFTTLKEELQRDLEN----LRKFQKGIAKNYQVKLKYDTELGESKFVLQELDLLKEDAIVYKLVGPILVKQDPGKPNANVRKRIGHLAAELECIDAII

Query:  RDLGEKKISKREKISKVEQRLRSLELGEREA
        +DL EK+ SKRE I KV+QR++SL+ G+ +A
Subjt:  RDLGEKKISKREKISKVEQRLRSLELGEREA

A0A5D2T520 Uncharacterized protein3.9e-2958.02Show/hide
Query:  MSSFTTLKEELQRDLEN----LRKFQKGIAKNYQVKLKYDTELGESKFVLQELDLLKEDAIVYKLVGPILVKQDPGKPNANVRKRIGHLAAELECIDAII
        MSS +T   +LQ DLEN    L K QK IAKN+QV+ KY  +LGE++ VL+ELDLLKEDA VYKL+GP+LVKQD  + NANVRKRI +++AEL+ +D+ +
Subjt:  MSSFTTLKEELQRDLEN----LRKFQKGIAKNYQVKLKYDTELGESKFVLQELDLLKEDAIVYKLVGPILVKQDPGKPNANVRKRIGHLAAELECIDAII

Query:  RDLGEKKISKREKISKVEQRLRSLELGEREA
        +DL EK+ SKRE I KV+QR++SL+ G+ +A
Subjt:  RDLGEKKISKREKISKVEQRLRSLELGEREA

A0A6J1B4T0 prefoldin subunit 62.3e-2958.78Show/hide
Query:  MSSFTTLKEELQRDLEN----LRKFQKGIAKNYQVKLKYDTELGESKFVLQELDLLKEDAIVYKLVGPILVKQDPGKPNANVRKRIGHLAAELECIDAII
        MSS +T   ELQRDLEN    L K QK IAKN+QV+ KY  +LGE++ VL+ELDLL EDA VYKL+GP+LVKQD  + NANVRKRI +++AEL+ +DA +
Subjt:  MSSFTTLKEELQRDLEN----LRKFQKGIAKNYQVKLKYDTELGESKFVLQELDLLKEDAIVYKLVGPILVKQDPGKPNANVRKRIGHLAAELECIDAII

Query:  RDLGEKKISKREKISKVEQRLRSLELGEREA
        +DL EK+ SKRE I KV+QR++S + G+ +A
Subjt:  RDLGEKKISKREKISKVEQRLRSLELGEREA

A0A6P5WIE5 prefoldin subunit 6-like isoform X13.9e-2958.78Show/hide
Query:  MSSFTTLKEELQRDLEN----LRKFQKGIAKNYQVKLKYDTELGESKFVLQELDLLKEDAIVYKLVGPILVKQDPGKPNANVRKRIGHLAAELECIDAII
        MSS +T   ELQRDLEN    L K QK IAKN+QV+ KY  +LGE++ VL+ELDLL EDA VYKL+GP+LVKQD  + NANVRKRI +++AE + +DA +
Subjt:  MSSFTTLKEELQRDLEN----LRKFQKGIAKNYQVKLKYDTELGESKFVLQELDLLKEDAIVYKLVGPILVKQDPGKPNANVRKRIGHLAAELECIDAII

Query:  RDLGEKKISKREKISKVEQRLRSLELGEREA
        +DL EKK SKRE I KV+QR++S + G+ +A
Subjt:  RDLGEKKISKREKISKVEQRLRSLELGEREA

SwissProt top hitse value%identityAlignment
A8Y197 Probable prefoldin subunit 62.7e-1130.63Show/hide
Query:  ELQRDLENLRKFQKGIAKNYQVKLKYDTELGESKFVLQELDLLKEDAIVYKLVGPILVKQDPGKPNANVRKRIGHLAAELECIDAIIRDLGEKKISKREK
        + + ++  L+  +K   K +  + + +  L ESK V  ELDL+  D+ VYKL+GP+LV+QD  +  + V KR+  + +E++ ++A I D+ +K I +R+K
Subjt:  ELQRDLENLRKFQKGIAKNYQVKLKYDTELGESKFVLQELDLLKEDAIVYKLVGPILVKQDPGKPNANVRKRIGHLAAELECIDAIIRDLGEKKISKREK

Query:  ISKVEQRLRSL
        +  +++  + +
Subjt:  ISKVEQRLRSL

O15212 Prefoldin subunit 63.2e-1230.58Show/hide
Query:  LKEELQRDLENLRKFQKGIAKNYQVKLKYDTELGESKFVLQELDLLKEDAIVYKLVGPILVKQDPGKPNANVRKRIGHLAAELECIDAIIRDLGEKKISK
        ++++LQ ++E  ++ QK ++K+   + K + +L E+  V +EL LL    +V+KL+GP+LVKQ+ G+  A V KR+ ++ AE++  ++ +RDL  +   +
Subjt:  LKEELQRDLENLRKFQKGIAKNYQVKLKYDTELGESKFVLQELDLLKEDAIVYKLVGPILVKQDPGKPNANVRKRIGHLAAELECIDAIIRDLGEKKISK

Query:  REKISKVEQRLRSLELGEREA
        RE +++++Q  +  +  +  A
Subjt:  REKISKVEQRLRSLELGEREA

Q03958 Prefoldin subunit 62.4e-1232.14Show/hide
Query:  LKEELQRDLENLRKFQKGIAKNYQVKLKYDTELGESKFVLQELDLLKEDAIVYKLVGPILVKQDPGKPNANVRKRIGHLAAELECIDAIIRDLGEKKISK
        ++++LQ ++E  ++ QK ++K+   + K + +L E+  V +EL LL    +V+KL+GP+LVKQ+ G+  A V KR+ ++ AE++  ++ +RDL  +   +
Subjt:  LKEELQRDLENLRKFQKGIAKNYQVKLKYDTELGESKFVLQELDLLKEDAIVYKLVGPILVKQDPGKPNANVRKRIGHLAAELECIDAIIRDLGEKKISK

Query:  REKISKVEQRLR
        RE +++++Q  +
Subjt:  REKISKVEQRLR

Q17Q89 Prefoldin subunit 61.9e-1230.58Show/hide
Query:  LKEELQRDLENLRKFQKGIAKNYQVKLKYDTELGESKFVLQELDLLKEDAIVYKLVGPILVKQDPGKPNANVRKRIGHLAAELECIDAIIRDLGEKKISK
        ++++LQ ++E  ++ QK ++K+   + K + +L E+  V +EL LL    +V+KL+GP+LVKQ+ G+  A V KR+ ++ AE++  ++ +RDL ++   +
Subjt:  LKEELQRDLENLRKFQKGIAKNYQVKLKYDTELGESKFVLQELDLLKEDAIVYKLVGPILVKQDPGKPNANVRKRIGHLAAELECIDAIIRDLGEKKISK

Query:  REKISKVEQRLRSLELGEREA
        RE +++++Q  +  +  +  A
Subjt:  REKISKVEQRLRSLELGEREA

Q5TJE6 Prefoldin subunit 63.2e-1230.58Show/hide
Query:  LKEELQRDLENLRKFQKGIAKNYQVKLKYDTELGESKFVLQELDLLKEDAIVYKLVGPILVKQDPGKPNANVRKRIGHLAAELECIDAIIRDLGEKKISK
        ++++LQ ++E  ++ QK ++K+   + K + +L E+  V +EL LL    +V+KL+GP+LVKQ+ G+  A V KR+ ++ AE++  ++ +RDL  +   +
Subjt:  LKEELQRDLENLRKFQKGIAKNYQVKLKYDTELGESKFVLQELDLLKEDAIVYKLVGPILVKQDPGKPNANVRKRIGHLAAELECIDAIIRDLGEKKISK

Query:  REKISKVEQRLRSLELGEREA
        RE +++++Q  +  +  +  A
Subjt:  REKISKVEQRLRSLELGEREA

Arabidopsis top hitse value%identityAlignment
AT1G29990.1 prefoldin 67.0e-3154.96Show/hide
Query:  MSSFTTLKEELQRDLEN----LRKFQKGIAKNYQVKLKYDTELGESKFVLQELDLLKEDAIVYKLVGPILVKQDPGKPNANVRKRIGHLAAELECIDAII
        MSS T    +LQRDLEN    L K QK I KN+Q++ KY  +LGE++ VL+ELDLL+EDA VYKL+GP+LVKQD  + NANVRKRI +++AEL+ +DAI+
Subjt:  MSSFTTLKEELQRDLEN----LRKFQKGIAKNYQVKLKYDTELGESKFVLQELDLLKEDAIVYKLVGPILVKQDPGKPNANVRKRIGHLAAELECIDAII

Query:  RDLGEKKISKREKISKVEQRLRSLELGEREA
        +D+ EK+ +KRE I K++QRL++++ G+ +A
Subjt:  RDLGEKKISKREKISKVEQRLRSLELGEREA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCTCCTTCACCACTCTCAAGGAGGAGCTACAGCGCGATCTCGAGAATCTCAGAAAGTTTCAGAAAGGCATTGCGAAGAATTACCAAGTAAAACTGAAGTATGATAC
AGAGCTGGGTGAAAGCAAGTTTGTTCTCCAGGAGTTGGATTTGCTGAAAGAGGATGCAATTGTTTACAAACTTGTTGGTCCTATTCTTGTGAAGCAAGATCCAGGAAAGC
CAAATGCAAACGTTCGGAAAAGAATTGGTCACCTCGCTGCTGAATTGGAGTGCATTGATGCAATTATCAGAGATTTGGGAGAGAAGAAGATTAGCAAAAGAGAGAAGATT
TCAAAGGTAGAACAAAGGCTTCGATCTCTCGAGCTTGGGGAGAGAGAAGCATAG
mRNA sequenceShow/hide mRNA sequence
ATAGAGTAGGGGAATTTGGCATTGTGAGATGAACAGTATTTCTTTCATTACTGTAGGGTGTTGCTGAGATTACGTATCAGTTTGTTACTGTTCCGACGAAGGAATAAGGC
CGCAGAATAGGGAGCGTAGAAAGCAACCAAAGCAACGAAGTTTCAGAATGAGCTCCTTCACCACTCTCAAGGAGGAGCTACAGCGCGATCTCGAGAATCTCAGAAAGTTT
CAGAAAGGCATTGCGAAGAATTACCAAGTAAAACTGAAGTATGATACAGAGCTGGGTGAAAGCAAGTTTGTTCTCCAGGAGTTGGATTTGCTGAAAGAGGATGCAATTGT
TTACAAACTTGTTGGTCCTATTCTTGTGAAGCAAGATCCAGGAAAGCCAAATGCAAACGTTCGGAAAAGAATTGGTCACCTCGCTGCTGAATTGGAGTGCATTGATGCAA
TTATCAGAGATTTGGGAGAGAAGAAGATTAGCAAAAGAGAGAAGATTTCAAAGGTAGAACAAAGGCTTCGATCTCTCGAGCTTGGGGAGAGAGAAGCATAG
Protein sequenceShow/hide protein sequence
MSSFTTLKEELQRDLENLRKFQKGIAKNYQVKLKYDTELGESKFVLQELDLLKEDAIVYKLVGPILVKQDPGKPNANVRKRIGHLAAELECIDAIIRDLGEKKISKREKI
SKVEQRLRSLELGEREA