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Tan0003443 (gene) of Snake gourd v1 genome

Gene IDTan0003443
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionGamma-thionin family protein
Genome locationLG06:16228791..16229753
RNA-Seq ExpressionTan0003443
SyntenyTan0003443
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BBH10080.1 Gamma-thionin family protein [Prunus dulcis]2.2e-0754.1Show/hide
Query:  FICIAFLLISGPAGAQNA--ACLGACSNFPNCNKACIIAGYEAGGMCTGSPLESLSCCCNS
        F+CIA LL SGPAGA  A   CLG CS+F +CN ACI   +  GG C G   E  +CCCN+
Subjt:  FICIAFLLISGPAGAQNA--ACLGACSNFPNCNKACIIAGYEAGGMCTGSPLESLSCCCNS

CAB4291337.1 unnamed protein product [Prunus armeniaca]2.1e-0549.21Show/hide
Query:  FICIAFLL--ISGPAGAQNA--ACLGACSNFPNCNKACIIAGYEAGGMCTGSPLESLSCCCNS
        F+CIA LL  ++GP GA  A   CLG CS F +CN ACI   +  GG C G   E  +CCCN+
Subjt:  FICIAFLL--ISGPAGAQNA--ACLGACSNFPNCNKACIIAGYEAGGMCTGSPLESLSCCCNS

KAF4378121.1 hypothetical protein G4B88_022944 [Cannabis sativa]1.6e-0553.23Show/hide
Query:  FICIAFLLIS-GPAGAQN--AACLGACSNFPNCNKACIIAGYEAGGMCTGSPLESLSCCCNS
        F+CIA LL S GPA A N    CLG CSN  +CN  CI  GY  GG C G  +  +SCCCN+
Subjt:  FICIAFLLIS-GPAGAQN--AACLGACSNFPNCNKACIIAGYEAGGMCTGSPLESLSCCCNS

KAF4386996.1 hypothetical protein G4B88_024568 [Cannabis sativa]1.6e-0553.23Show/hide
Query:  FICIAFLLIS-GPAGAQN--AACLGACSNFPNCNKACIIAGYEAGGMCTGSPLESLSCCCNS
        F+CIA LL S GPA A N    CLG CSN  +CN  CI  GY  GG C G  +  +SCCCN+
Subjt:  FICIAFLLIS-GPAGAQN--AACLGACSNFPNCNKACIIAGYEAGGMCTGSPLESLSCCCNS

KAG6575964.1 hypothetical protein SDJN03_26603, partial [Cucurbita argyrosperma subsp. sororia]1.3e-1054.43Show/hide
Query:  MASSFVIRSSFLCFICIAFLLISG----PAGAQNAA--CLGACSNFPNCNKACIIAGYEAGGMCTGSPLESLSCCCNST
        MASSF +RSSF   +C+AF+LI+G    P  A N A  CLG CS  PNC  ACI AG+  GG C G   +  SCCCNST
Subjt:  MASSFVIRSSFLCFICIAFLLISG----PAGAQNAA--CLGACSNFPNCNKACIIAGYEAGGMCTGSPLESLSCCCNST

TrEMBL top hitse value%identityAlignment
A0A4Y1S039 Gamma-thionin family protein1.1e-0754.1Show/hide
Query:  FICIAFLLISGPAGAQNA--ACLGACSNFPNCNKACIIAGYEAGGMCTGSPLESLSCCCNS
        F+CIA LL SGPAGA  A   CLG CS+F +CN ACI   +  GG C G   E  +CCCN+
Subjt:  FICIAFLLISGPAGAQNA--ACLGACSNFPNCNKACIIAGYEAGGMCTGSPLESLSCCCNS

A0A6J5VUM4 Uncharacterized protein1.0e-0549.21Show/hide
Query:  FICIAFLL--ISGPAGAQNA--ACLGACSNFPNCNKACIIAGYEAGGMCTGSPLESLSCCCNS
        F+CIA LL  ++GP GA  A   CLG CS F +CN ACI   +  GG C G   E  +CCCN+
Subjt:  FICIAFLL--ISGPAGAQNA--ACLGACSNFPNCNKACIIAGYEAGGMCTGSPLESLSCCCNS

A0A7J6G557 Uncharacterized protein7.7e-0653.23Show/hide
Query:  FICIAFLLIS-GPAGAQN--AACLGACSNFPNCNKACIIAGYEAGGMCTGSPLESLSCCCNS
        F+CIA LL S GPA A N    CLG CSN  +CN  CI  GY  GG C G  +  +SCCCN+
Subjt:  FICIAFLLIS-GPAGAQN--AACLGACSNFPNCNKACIIAGYEAGGMCTGSPLESLSCCCNS

A0A7J6G7N8 Uncharacterized protein2.2e-0549.33Show/hide
Query:  MASSFVIRSSFLCFICIAFLLIS-GPAGAQN--AACLGACSNFPNCNKACIIAGYEAGGMCTGSPLESLSCCCNS
        M SS  I  + + F+CIA LL S GPA A N    CLG CSN  +CN  CI  GY  GG C G  +  +SCCCN+
Subjt:  MASSFVIRSSFLCFICIAFLLIS-GPAGAQN--AACLGACSNFPNCNKACIIAGYEAGGMCTGSPLESLSCCCNS

A0A7J6GVQ0 Uncharacterized protein7.7e-0653.23Show/hide
Query:  FICIAFLLIS-GPAGAQN--AACLGACSNFPNCNKACIIAGYEAGGMCTGSPLESLSCCCNS
        F+CIA LL S GPA A N    CLG CSN  +CN  CI  GY  GG C G  +  +SCCCN+
Subjt:  FICIAFLLIS-GPAGAQN--AACLGACSNFPNCNKACIIAGYEAGGMCTGSPLESLSCCCNS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCTCCTTTGTCATTCGATCTTCATTCCTATGCTTCATTTGTATTGCTTTCCTTCTCATCTCTGGGCCAGCAGGTGCTCAAAATGCAGCCTGTTTGGGAGCATG
CTCAAATTTTCCAAACTGCAATAAAGCTTGCATCATTGCAGGGTATGAGGCAGGTGGTATGTGCACAGGCTCCCCCCTAGAGTCTCTTTCTTGCTGCTGCAACAGTACCT
AA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCTCCTTTGTCATTCGATCTTCATTCCTATGCTTCATTTGTATTGCTTTCCTTCTCATCTCTGGGCCAGCAGGTGCTCAAAATGCAGCCTGTTTGGGAGCATG
CTCAAATTTTCCAAACTGCAATAAAGCTTGCATCATTGCAGGGTATGAGGCAGGTGGTATGTGCACAGGCTCCCCCCTAGAGTCTCTTTCTTGCTGCTGCAACAGTACCT
AA
Protein sequenceShow/hide protein sequence
MASSFVIRSSFLCFICIAFLLISGPAGAQNAACLGACSNFPNCNKACIIAGYEAGGMCTGSPLESLSCCCNST