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Tan0003444 (gene) of Snake gourd v1 genome

Gene IDTan0003444
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG04:5826975..5827782
RNA-Seq ExpressionTan0003444
SyntenyTan0003444
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7032002.1 hypothetical protein SDJN02_06044, partial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-5077.71Show/hide
Query:  MLGFLSRPCQWS-SPSLPFLSSTSSSSSLSPSSLR-YKFTLHCAFLRPQSQIPRNRARFTAFSSNNGNGLGGNIKEREGGRNGAKGSNGGDDLRKERGPI
        MLGFL+ P QW  SPSLP  SS  S S+ S  S   +KF LH      +SQIP  R RFTA +SNN NGLGGNIKEREG RNGAKGSNG DDLRKERGP+
Subjt:  MLGFLSRPCQWS-SPSLPFLSSTSSSSSLSPSSLR-YKFTLHCAFLRPQSQIPRNRARFTAFSSNNGNGLGGNIKEREGGRNGAKGSNGGDDLRKERGPI

Query:  FNIKWTELLIDPDPDNLLAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLIFILITLL
        FNIKW ELLIDPDPDN+LAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLIFILITLL
Subjt:  FNIKWTELLIDPDPDNLLAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLIFILITLL

XP_022139143.1 uncharacterized protein LOC111010120 [Momordica charantia]2.1e-5880.95Show/hide
Query:  MLGFLSRPCQWSSPSLPFLSSTSSSSSLSPSSL----RYKFTLHCAFLRPQSQIPRNRARFTAFSSNNGNGLGGNIKEREGGRNGAKGSNGGDDLRKERG
        MLGF + PCQWSS S+  LSST + SS S  SL    R+KFTLH A L  +SQIPRNRARFTAFS N  NGLGGNIKEREG R GAKGSNGGDDL+KERG
Subjt:  MLGFLSRPCQWSSPSLPFLSSTSSSSSLSPSSL----RYKFTLHCAFLRPQSQIPRNRARFTAFSSNNGNGLGGNIKEREGGRNGAKGSNGGDDLRKERG

Query:  PIFNIKWTELLIDPDPDNLLAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLIFILITLL
        P+FNIKW ELLIDPDPDN+LAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLIFILITLL
Subjt:  PIFNIKWTELLIDPDPDNLLAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLIFILITLL

XP_022957096.1 uncharacterized protein LOC111458579 [Cucurbita moschata]3.6e-5077.11Show/hide
Query:  MLGFLSRPCQWS-SPSLPFLSSTSSSSSLSPSSLR-YKFTLHCAFLRPQSQIPRNRARFTAFSSNNGNGLGGNIKEREGGRNGAKGSNGGDDLRKERGPI
        MLGFL+ P QW  SPSLP  SS  S S+ S  S   +KF LH +    +SQIP  R RFTA +SNN NGLGGNIKEREG RNGAKGS G DDLRKERGP+
Subjt:  MLGFLSRPCQWS-SPSLPFLSSTSSSSSLSPSSLR-YKFTLHCAFLRPQSQIPRNRARFTAFSSNNGNGLGGNIKEREGGRNGAKGSNGGDDLRKERGPI

Query:  FNIKWTELLIDPDPDNLLAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLIFILITLL
        FNIKW ELLIDPDPDN+LAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLIFILITLL
Subjt:  FNIKWTELLIDPDPDNLLAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLIFILITLL

XP_022993576.1 uncharacterized protein LOC111489528 [Cucurbita maxima]1.3e-4773.84Show/hide
Query:  MLGFLSRPCQWS-SPSLPFLSSTSSSSSLSPSSLR-------YKFTLHCAFLRPQSQIPRNRARFTAFSSNNGNGLGGNIKEREGGRNGAKGSNGGDDLR
        MLGFL+ P QW  SPSL      SSSSS  P S R       +KF LH +    +SQI   R RF A +SNN NGLGGNIKEREG RNGAKGS G DDLR
Subjt:  MLGFLSRPCQWS-SPSLPFLSSTSSSSSLSPSSLR-------YKFTLHCAFLRPQSQIPRNRARFTAFSSNNGNGLGGNIKEREGGRNGAKGSNGGDDLR

Query:  KERGPIFNIKWTELLIDPDPDNLLAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLIFILITLL
        KERGP+FNIKW ELLIDPDPDN+LAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLIFILITLL
Subjt:  KERGPIFNIKWTELLIDPDPDNLLAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLIFILITLL

XP_023549272.1 uncharacterized protein LOC111807677 [Cucurbita pepo subsp. pepo]1.3e-5077.71Show/hide
Query:  MLGFLSRPCQWS-SPSLPFLSSTSSSSSLSPSSL-RYKFTLHCAFLRPQSQIPRNRARFTAFSSNNGNGLGGNIKEREGGRNGAKGSNGGDDLRKERGPI
        MLGFL+ P QW  SPSL   SS  S S+ S  S   +KF LH +    +SQIP  R RFTA +SNN NGLGGNIKEREG RNGAKGSNGGDDLRKERGP+
Subjt:  MLGFLSRPCQWS-SPSLPFLSSTSSSSSLSPSSL-RYKFTLHCAFLRPQSQIPRNRARFTAFSSNNGNGLGGNIKEREGGRNGAKGSNGGDDLRKERGPI

Query:  FNIKWTELLIDPDPDNLLAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLIFILITLL
        FNIKW ELLIDPDPDN+LAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLIFILITLL
Subjt:  FNIKWTELLIDPDPDNLLAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLIFILITLL

TrEMBL top hitse value%identityAlignment
A0A1S3BFX0 uncharacterized protein LOC1034894076.5e-4573.49Show/hide
Query:  MLGFLSRPCQWS-SPSLPFLSSTSSSSSLSPSSLRYKFTLHCAFLRPQSQIPRNRARFTAFSSNNGNGLGGNIKEREGGRNGAK-GSNGGDDLRKERGPI
        MLGFL+ P Q   SPSL  L S SS SSL      YKF LH  F   +  I  NR RFTA +SN     GG+IKEREG RNGAK  SNGGDDL+KERGP+
Subjt:  MLGFLSRPCQWS-SPSLPFLSSTSSSSSLSPSSLRYKFTLHCAFLRPQSQIPRNRARFTAFSSNNGNGLGGNIKEREGGRNGAK-GSNGGDDLRKERGPI

Query:  FNIKWTELLIDPDPDNLLAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLIFILITLL
        FNIKW ELLIDPDPDN+LAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLIFILITLL
Subjt:  FNIKWTELLIDPDPDNLLAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLIFILITLL

A0A5D3CD16 Uncharacterized protein6.5e-4573.49Show/hide
Query:  MLGFLSRPCQWS-SPSLPFLSSTSSSSSLSPSSLRYKFTLHCAFLRPQSQIPRNRARFTAFSSNNGNGLGGNIKEREGGRNGAK-GSNGGDDLRKERGPI
        MLGFL+ P Q   SPSL  L S SS SSL      YKF LH  F   +  I  NR RFTA +SN     GG+IKEREG RNGAK  SNGGDDL+KERGP+
Subjt:  MLGFLSRPCQWS-SPSLPFLSSTSSSSSLSPSSLRYKFTLHCAFLRPQSQIPRNRARFTAFSSNNGNGLGGNIKEREGGRNGAK-GSNGGDDLRKERGPI

Query:  FNIKWTELLIDPDPDNLLAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLIFILITLL
        FNIKW ELLIDPDPDN+LAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLIFILITLL
Subjt:  FNIKWTELLIDPDPDNLLAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLIFILITLL

A0A6J1CF05 uncharacterized protein LOC1110101201.0e-5880.95Show/hide
Query:  MLGFLSRPCQWSSPSLPFLSSTSSSSSLSPSSL----RYKFTLHCAFLRPQSQIPRNRARFTAFSSNNGNGLGGNIKEREGGRNGAKGSNGGDDLRKERG
        MLGF + PCQWSS S+  LSST + SS S  SL    R+KFTLH A L  +SQIPRNRARFTAFS N  NGLGGNIKEREG R GAKGSNGGDDL+KERG
Subjt:  MLGFLSRPCQWSSPSLPFLSSTSSSSSLSPSSL----RYKFTLHCAFLRPQSQIPRNRARFTAFSSNNGNGLGGNIKEREGGRNGAKGSNGGDDLRKERG

Query:  PIFNIKWTELLIDPDPDNLLAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLIFILITLL
        P+FNIKW ELLIDPDPDN+LAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLIFILITLL
Subjt:  PIFNIKWTELLIDPDPDNLLAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLIFILITLL

A0A6J1GYA2 uncharacterized protein LOC1114585791.8e-5077.11Show/hide
Query:  MLGFLSRPCQWS-SPSLPFLSSTSSSSSLSPSSLR-YKFTLHCAFLRPQSQIPRNRARFTAFSSNNGNGLGGNIKEREGGRNGAKGSNGGDDLRKERGPI
        MLGFL+ P QW  SPSLP  SS  S S+ S  S   +KF LH +    +SQIP  R RFTA +SNN NGLGGNIKEREG RNGAKGS G DDLRKERGP+
Subjt:  MLGFLSRPCQWS-SPSLPFLSSTSSSSSLSPSSLR-YKFTLHCAFLRPQSQIPRNRARFTAFSSNNGNGLGGNIKEREGGRNGAKGSNGGDDLRKERGPI

Query:  FNIKWTELLIDPDPDNLLAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLIFILITLL
        FNIKW ELLIDPDPDN+LAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLIFILITLL
Subjt:  FNIKWTELLIDPDPDNLLAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLIFILITLL

A0A6J1JWP5 uncharacterized protein LOC1114895286.3e-4873.84Show/hide
Query:  MLGFLSRPCQWS-SPSLPFLSSTSSSSSLSPSSLR-------YKFTLHCAFLRPQSQIPRNRARFTAFSSNNGNGLGGNIKEREGGRNGAKGSNGGDDLR
        MLGFL+ P QW  SPSL      SSSSS  P S R       +KF LH +    +SQI   R RF A +SNN NGLGGNIKEREG RNGAKGS G DDLR
Subjt:  MLGFLSRPCQWS-SPSLPFLSSTSSSSSLSPSSLR-------YKFTLHCAFLRPQSQIPRNRARFTAFSSNNGNGLGGNIKEREGGRNGAKGSNGGDDLR

Query:  KERGPIFNIKWTELLIDPDPDNLLAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLIFILITLL
        KERGP+FNIKW ELLIDPDPDN+LAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLIFILITLL
Subjt:  KERGPIFNIKWTELLIDPDPDNLLAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLIFILITLL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G40045.1 unknown protein2.5e-1757.69Show/hide
Query:  SSNNGNGLGGNIKEREGGRNGAKGSNGGDDLRKERGPIFNIKWTELLIDPDPDNLLAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLIFIL
        ++ NGN    + KE  GG N    ++ G+  +K++   F+ KW ELL +PD DN +AV L G+L WAS+QVL QLFFIS AILVAALKYSFIAALLIFIL
Subjt:  SSNNGNGLGGNIKEREGGRNGAKGSNGGDDLRKERGPIFNIKWTELLIDPDPDNLLAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLIFIL

Query:  ITLL
        +TLL
Subjt:  ITLL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAGGGTTTCTTAGTCGGCCATGCCAATGGAGTTCTCCATCTCTCCCATTTCTCTCTTCAACTTCATCATCTTCTTCCCTATCCCCAAGTTCTCTACGCTACAAATT
CACTCTCCATTGCGCGTTTCTCAGACCGCAATCTCAAATTCCTAGAAACCGCGCAAGATTCACGGCGTTTTCGAGCAATAACGGCAATGGATTGGGCGGAAATATAAAGG
AAAGAGAAGGAGGAAGAAATGGGGCGAAGGGCTCCAATGGCGGCGATGATTTGAGAAAAGAACGAGGGCCGATTTTCAATATCAAATGGACTGAGCTTCTGATCGATCCG
GATCCTGATAACTTATTGGCGGTTGCGTTGACTGGTTTGCTTGCTTGGGCAAGTGTTCAGGTTTTGTGGCAGCTATTCTTCATCTCTTTGGCTATTTTAGTGGCGGCTCT
TAAGTACTCTTTTATTGCTGCGCTTCTTATTTTCATTTTAATTACATTACTCTAG
mRNA sequenceShow/hide mRNA sequence
TTCCCCGGTTCCTCGTCTTAGATCTCTCTGAGCCTTGTTTCCCTAAGCCGAAAGACATGGGTGCCGCGAACCGCTGCAGATTCCGGGAACTTTTCCTTCCACCGCACGCG
CGAACAAATTGAAGTAAAATCAAAACAACAATGTTAGGGTTTCTTAGTCGGCCATGCCAATGGAGTTCTCCATCTCTCCCATTTCTCTCTTCAACTTCATCATCTTCTTC
CCTATCCCCAAGTTCTCTACGCTACAAATTCACTCTCCATTGCGCGTTTCTCAGACCGCAATCTCAAATTCCTAGAAACCGCGCAAGATTCACGGCGTTTTCGAGCAATA
ACGGCAATGGATTGGGCGGAAATATAAAGGAAAGAGAAGGAGGAAGAAATGGGGCGAAGGGCTCCAATGGCGGCGATGATTTGAGAAAAGAACGAGGGCCGATTTTCAAT
ATCAAATGGACTGAGCTTCTGATCGATCCGGATCCTGATAACTTATTGGCGGTTGCGTTGACTGGTTTGCTTGCTTGGGCAAGTGTTCAGGTTTTGTGGCAGCTATTCTT
CATCTCTTTGGCTATTTTAGTGGCGGCTCTTAAGTACTCTTTTATTGCTGCGCTTCTTATTTTCATTTTAATTACATTACTCTAGAAAAACATCAACAACAACAACAACA
ACAATCTTGTATAGTCCCTTTTATGTTTGATTTATTGGATTTCAATTGTAACTCTATGTCCTCTGTGTATAAAAATGTGTTTGTCTAGTATTAAGAGAAGGTGAAATTAA
AATTTTAGTAGGTTTTTGTCACGTTCTGAAGTTTGAAA
Protein sequenceShow/hide protein sequence
MLGFLSRPCQWSSPSLPFLSSTSSSSSLSPSSLRYKFTLHCAFLRPQSQIPRNRARFTAFSSNNGNGLGGNIKEREGGRNGAKGSNGGDDLRKERGPIFNIKWTELLIDP
DPDNLLAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLIFILITLL