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Tan0003480 (gene) of Snake gourd v1 genome

Gene IDTan0003480
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionCOX assembly mitochondrial protein
Genome locationLG05:80659429..80661570
RNA-Seq ExpressionTan0003480
SyntenyTan0003480
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004145445.1 uncharacterized protein LOC101219184 [Cucumis sativus]4.4e-3791.86Show/hide
Query:  PTGGDGGCERLELALRECHKRLPEGPARRSGCRHLNRSLAECLVATACPNEAEAVRTLCSSGGTALKRSQCEQAKLSLSFCLSSLQ
        P GGDGGC+RLE ALRECHKR+PEGPARRS CRHLNRSLAECLVATACP+EAEAVRTLCSSGGTALKRSQCEQAK SLSFCLSSLQ
Subjt:  PTGGDGGCERLELALRECHKRLPEGPARRSGCRHLNRSLAECLVATACPNEAEAVRTLCSSGGTALKRSQCEQAKLSLSFCLSSLQ
XP_022955041.1 uncharacterized protein LOC111457119 [Cucurbita moschata]1.1e-3588.51Show/hide
Query:  PTGGDGGCERLELALRECHKRLPEGPARRSGCRHLNRSLAECLVATACPNEAEAVRTLCSSGGTALKRSQCEQAKLSLSFCLSSLQL
        P GGDGGCERLE ALR+CHKRLPEGPARRSGC HLNRS AECLVAT CPNEAEAVRTLCSSGGTALKRSQCE+AK S S CLSSLQL
Subjt:  PTGGDGGCERLELALRECHKRLPEGPARRSGCRHLNRSLAECLVATACPNEAEAVRTLCSSGGTALKRSQCEQAKLSLSFCLSSLQL
XP_022994930.1 uncharacterized protein LOC111490507 [Cucurbita maxima]4.8e-3689.66Show/hide
Query:  PTGGDGGCERLELALRECHKRLPEGPARRSGCRHLNRSLAECLVATACPNEAEAVRTLCSSGGTALKRSQCEQAKLSLSFCLSSLQL
        P GGDGGCERLE ALR+CHKRLPEGPARRSGC HLNRS AECLVAT CPNEAEAVRTLCSSGGTALKRSQCEQAK S S CLSSLQL
Subjt:  PTGGDGGCERLELALRECHKRLPEGPARRSGCRHLNRSLAECLVATACPNEAEAVRTLCSSGGTALKRSQCEQAKLSLSFCLSSLQL
XP_023542217.1 uncharacterized protein LOC111802182 [Cucurbita pepo subsp. pepo]3.7e-3689.66Show/hide
Query:  PTGGDGGCERLELALRECHKRLPEGPARRSGCRHLNRSLAECLVATACPNEAEAVRTLCSSGGTALKRSQCEQAKLSLSFCLSSLQL
        P GGDGGCERLE ALR+CHKRLPEGPARRSGC HLNRS AECLVAT CPNEAEAVRTLCSSGGTALKRSQCEQAK S S CLSSLQL
Subjt:  PTGGDGGCERLELALRECHKRLPEGPARRSGCRHLNRSLAECLVATACPNEAEAVRTLCSSGGTALKRSQCEQAKLSLSFCLSSLQL
XP_038893663.1 uncharacterized protein LOC120082530 [Benincasa hispida]5.7e-3789.13Show/hide
Query:  IPTG-----GDGGCERLELALRECHKRLPEGPARRSGCRHLNRSLAECLVATACPNEAEAVRTLCSSGGTALKRSQCEQAKLSLSFCLSSLQ
        +PTG     GDGGCERLE ALRECHKRLPEGPARRS CRHLNRSLAECLVATACP+EAEAVRTLCSSGGTALKRSQCEQAK SLSFCLSSLQ
Subjt:  IPTG-----GDGGCERLELALRECHKRLPEGPARRSGCRHLNRSLAECLVATACPNEAEAVRTLCSSGGTALKRSQCEQAKLSLSFCLSSLQ
TrEMBL top hitse value%identityAlignment
A0A0A0LYC1 Uncharacterized protein2.1e-3791.86Show/hide
Query:  PTGGDGGCERLELALRECHKRLPEGPARRSGCRHLNRSLAECLVATACPNEAEAVRTLCSSGGTALKRSQCEQAKLSLSFCLSSLQ
        P GGDGGC+RLE ALRECHKR+PEGPARRS CRHLNRSLAECLVATACP+EAEAVRTLCSSGGTALKRSQCEQAK SLSFCLSSLQ
Subjt:  PTGGDGGCERLELALRECHKRLPEGPARRSGCRHLNRSLAECLVATACPNEAEAVRTLCSSGGTALKRSQCEQAKLSLSFCLSSLQ
A0A1S3C8S8 uncharacterized protein LOC1034982676.8e-3686.02Show/hide
Query:  MFPI---PTGGDGGCERLELALRECHKRLPEGPARRSGCRHLNRSLAECLVATACPNEAEAVRTLCSSGGTALKRSQCEQAKLSLSFCLSSLQ
        M PI   P  GD GCERLE ALRECHKR+PEGPARRS CRHLNRSLAECLVATACP+E EAVRTLCSSGGTALKRSQCEQAK SLSFCLSSLQ
Subjt:  MFPI---PTGGDGGCERLELALRECHKRLPEGPARRSGCRHLNRSLAECLVATACPNEAEAVRTLCSSGGTALKRSQCEQAKLSLSFCLSSLQ
A0A5D3CLT3 Uncharacterized protein6.8e-3686.02Show/hide
Query:  MFPI---PTGGDGGCERLELALRECHKRLPEGPARRSGCRHLNRSLAECLVATACPNEAEAVRTLCSSGGTALKRSQCEQAKLSLSFCLSSLQ
        M PI   P  GD GCERLE ALRECHKR+PEGPARRS CRHLNRSLAECLVATACP+E EAVRTLCSSGGTALKRSQCEQAK SLSFCLSSLQ
Subjt:  MFPI---PTGGDGGCERLELALRECHKRLPEGPARRSGCRHLNRSLAECLVATACPNEAEAVRTLCSSGGTALKRSQCEQAKLSLSFCLSSLQ
A0A6J1GSM0 uncharacterized protein LOC1114571195.2e-3688.51Show/hide
Query:  PTGGDGGCERLELALRECHKRLPEGPARRSGCRHLNRSLAECLVATACPNEAEAVRTLCSSGGTALKRSQCEQAKLSLSFCLSSLQL
        P GGDGGCERLE ALR+CHKRLPEGPARRSGC HLNRS AECLVAT CPNEAEAVRTLCSSGGTALKRSQCE+AK S S CLSSLQL
Subjt:  PTGGDGGCERLELALRECHKRLPEGPARRSGCRHLNRSLAECLVATACPNEAEAVRTLCSSGGTALKRSQCEQAKLSLSFCLSSLQL
A0A6J1K2P5 uncharacterized protein LOC1114905072.3e-3689.66Show/hide
Query:  PTGGDGGCERLELALRECHKRLPEGPARRSGCRHLNRSLAECLVATACPNEAEAVRTLCSSGGTALKRSQCEQAKLSLSFCLSSLQL
        P GGDGGCERLE ALR+CHKRLPEGPARRSGC HLNRS AECLVAT CPNEAEAVRTLCSSGGTALKRSQCEQAK S S CLSSLQL
Subjt:  PTGGDGGCERLELALRECHKRLPEGPARRSGCRHLNRSLAECLVATACPNEAEAVRTLCSSGGTALKRSQCEQAKLSLSFCLSSLQL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G31175.1 unknown protein2.7e-2973.42Show/hide
Query:  CERLELALRECHKRLPEGPARRSGCRHLNRSLAECLVATACPNEAEAVRTLCSSGGTALKRSQCEQAKLSLSFCLSSLQ
        C+RLE AL +CH+R+PEGPARRSGCRHLN++ AEC+VA ACP E+EAVR+LCSSGGT+LKR QCE A+LSLS CLS  Q
Subjt:  CERLELALRECHKRLPEGPARRSGCRHLNRSLAECLVATACPNEAEAVRTLCSSGGTALKRSQCEQAKLSLSFCLSSLQ

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCCCAATCCCAACCGGCGGCGACGGCGGCTGCGAGCGCCTGGAGCTGGCTCTCCGAGAGTGCCACAAGCGACTTCCAGAAGGTCCGGCGCGGCGGTCGGGCTGCCG
GCACCTGAACCGATCTCTTGCAGAGTGCCTAGTGGCGACGGCTTGCCCTAACGAGGCGGAGGCGGTGCGAACCCTCTGCTCCAGCGGCGGAACCGCTCTCAAGAGATCGC
AGTGCGAGCAAGCTAAGCTTTCGCTCTCTTTCTGTCTCTCTTCTCTCCAATTATGA
mRNA sequenceShow/hide mRNA sequence
TGTTGATATAGGTAGTAATTATGCCTTGTATAGTTAGGATCTCTCTCATTTCAATGTGAATGTCAGTTCATTCATGTACTTCTCTTAACTTGGGTGTTATATTGCATGCC
CACCAGCTTTCTTCCTCAAACCACATCATACTGGAAGAGGTTATGCTCTTATACCATCTGTAATGTCCTAACCCTAGAAGTCGAAGATCCTTGTGGCTAACTCGTGACTT
AAACAGCGCATGAGGAGATTAATGCAATCATCTTGCCACAAACTAAAGAAACTTTCTCTTCCCTCCCAAATGGTGTGGGACCCGACCCGATAGCCAGAGGATAGAGAAAA
AGATGTTCCCAATCCCAACCGGCGGCGACGGCGGCTGCGAGCGCCTGGAGCTGGCTCTCCGAGAGTGCCACAAGCGACTTCCAGAAGGTCCGGCGCGGCGGTCGGGCTGC
CGGCACCTGAACCGATCTCTTGCAGAGTGCCTAGTGGCGACGGCTTGCCCTAACGAGGCGGAGGCGGTGCGAACCCTCTGCTCCAGCGGCGGAACCGCTCTCAAGAGATC
GCAGTGCGAGCAAGCTAAGCTTTCGCTCTCTTTCTGTCTCTCTTCTCTCCAATTATGAAACCCTAGATCCCTGAAATCGGCATTCGTATCATCCAACGAAGTTCAAAGTT
CGTAGGGAAATTGGAAGAACACCGTCGGAGATTGAACGATAATCGGCGAAGCTTTTTTATTTGCAATTTTTTTAACAAGAATTGTATTTGTTTTAGATCGTAATAATGTA
ATTGATATAATTATCGACTAAAATCAATCAGATTTTTTTTATTTGTTTTGAGTTCAACGACGACAATAGGGCTATAATTGGCAATCAATCAGAAGTTAAGT
Protein sequenceShow/hide protein sequence
MFPIPTGGDGGCERLELALRECHKRLPEGPARRSGCRHLNRSLAECLVATACPNEAEAVRTLCSSGGTALKRSQCEQAKLSLSFCLSSLQL