; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0003484 (gene) of Snake gourd v1 genome

Gene IDTan0003484
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionEnzymatic polyprotein
Genome locationLG01:104945833..104949980
RNA-Seq ExpressionTan0003484
SyntenyTan0003484
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037024.1 polyprotein [Cucumis melo var. makuwa]7.6e-3946.25Show/hide
Query:  MDNTPPSKKKNHSKKSFGKSKRKESSKDYSYKRRNYGR-RKKTFSSKRSTVCFKCKKEGHYANKCPLVKKIHKLEIEEETKQSLLNILGDSEMSSDEENS
        +DNT PS+KK+ SKK F +SK  ES    + KR+ +G+ R K    K +T CFKC K+GHYAN+CP+V+KI+ +EI+E+ KQSL  ++   E+SS+EE  
Subjt:  MDNTPPSKKKNHSKKSFGKSKRKESSKDYSYKRRNYGR-RKKTFSSKRSTVCFKCKKEGHYANKCPLVKKIHKLEIEEETKQSLLNILGDSEMSSDEENS

Query:  S----EDMVNELKEESSNESSYSNDDSDIDDVVPCSGCINVLTKSQENLLDLIESIQDENTRRKMLLKLREELEAPDNDQKKPTYFNFENVLKRLKEGDS
        S    ED++N L EESS E S S +++D ++ +   GCINVLT +Q+ LLD+IE + DE  R+K+LL+LRE+LE PD   K P  F+F+ V+  L + + 
Subjt:  S----EDMVNELKEESSNESSYSNDDSDIDDVVPCSGCINVLTKSQENLLDLIESIQDENTRRKMLLKLREELEAPDNDQKKPTYFNFENVLKRLKEGDS

Query:  PSPAKVSDLQMEVRNLKREVAENKQRIASLEYAFARFQDK
         +P KV DL  E+  LK+E+ ENKQ+I+ L+ A    Q++
Subjt:  PSPAKVSDLQMEVRNLKREVAENKQRIASLEYAFARFQDK

KAA0050625.1 Enzymatic polyprotein [Cucumis melo var. makuwa]1.6e-4449.58Show/hide
Query:  MDNTPPSKKKNHSKKSFGKSKRKESSKDYSYKRRNYGRRK-KTFSSKRSTVCFKCKKEGHYANKCPLVKKIHKLEIEEETKQSLLNILGDSEMSSDEENS
        +DNT PS+KK+HSKK F +SK  ES    + KR+ +G+ K K    K +T CFKC K+GHYAN+CP+VKKI+++EI+E+ KQSLL ++   E+SS+E+  
Subjt:  MDNTPPSKKKNHSKKSFGKSKRKESSKDYSYKRRNYGRRK-KTFSSKRSTVCFKCKKEGHYANKCPLVKKIHKLEIEEETKQSLLNILGDSEMSSDEENS

Query:  S----EDMVNELKEESSNESSYSNDDSDIDDVVPCSGCINVLTKSQENLLDLIESIQDENTRRKMLLKLREELEAPDNDQKKPTYFNFENVLKRLKEGDS
        S    ED++N L EESS E S S +++DI++V+ CSGCI+VLT +Q+ LLD+IE + DE  R+ +LL+LRE+LE PD   K P  F+F+NV+  L + + 
Subjt:  S----EDMVNELKEESSNESSYSNDDSDIDDVVPCSGCINVLTKSQENLLDLIESIQDENTRRKMLLKLREELEAPDNDQKKPTYFNFENVLKRLKEGDS

Query:  PSPAKVSDLQMEVRNLKREVAENKQRIASLEYAFARFQDK
         +P KV+DLQ E++ LK EV ENKQ+I+ LE A    Q++
Subjt:  PSPAKVSDLQMEVRNLKREVAENKQRIASLEYAFARFQDK

KAA0056776.1 Enzymatic polyprotein [Cucumis melo var. makuwa]1.2e-3647.93Show/hide
Query:  KKKNHSKKSFGKSKRKESSKDYSYKRR-NYGRRKKTFSSKRSTVCFKCKKEGHYANKCPLVKKIHKLEIEEETKQSLLNIL--GDSEMSSDEENSSEDMV
        KK+  SKK F KSK K+       +R  N G+ KK +SSK  T+CFKC ++GHYAN+CPL  KI+ + I+EETKQSLL  +   D   S  E +S ED +
Subjt:  KKKNHSKKSFGKSKRKESSKDYSYKRR-NYGRRKKTFSSKRSTVCFKCKKEGHYANKCPLVKKIHKLEIEEETKQSLLNIL--GDSEMSSDEENSSEDMV

Query:  NELKEE--SSNESSYS-NDDSDIDDVVP--------CSGCINVLTKSQENLLDLIESIQDENTRRKMLLKLREELE--APDNDQKKPTYFNFENVLKRLK
        N L+EE  SS E  YS +D SD +  +P        CSG INV+TK QE L DLIE I DE  +R  LLKL++ LE  AP    + P  ++++++L R+K
Subjt:  NELKEE--SSNESSYS-NDDSDIDDVVP--------CSGCINVLTKSQENLLDLIESIQDENTRRKMLLKLREELE--APDNDQKKPTYFNFENVLKRLK

Query:  EGDSPSPAKVSDLQMEVRNLKREVAENKQRIASLEYAFARFQ
         G++  P +V DL  EV+ LKREVAENKQR+  LE AF  FQ
Subjt:  EGDSPSPAKVSDLQMEVRNLKREVAENKQRIASLEYAFARFQ

KAA0059217.1 Enzymatic polyprotein [Cucumis melo var. makuwa]4.2e-3748.35Show/hide
Query:  KKKNHSKKSFGKSKRKESSKDYSYKRR-NYGRRKKTFSSKRSTVCFKCKKEGHYANKCPLVKKIHKLEIEEETKQSLLNIL--GDSEMSSDEENSSEDMV
        KK+  SKK F KSK K+       KR  N G+ KK +SSK  T+CFKC ++GHYAN+CPL  KI+ + I+EETKQSLL  +   D   S  E +S ED +
Subjt:  KKKNHSKKSFGKSKRKESSKDYSYKRR-NYGRRKKTFSSKRSTVCFKCKKEGHYANKCPLVKKIHKLEIEEETKQSLLNIL--GDSEMSSDEENSSEDMV

Query:  NELKEE--SSNESSYS-NDDSDIDDVVP--------CSGCINVLTKSQENLLDLIESIQDENTRRKMLLKLREELE--APDNDQKKPTYFNFENVLKRLK
        N L+EE  SS E  YS +D SD +  +P        CSG INV+TK QE L DLIE I DE  +R  LLKL++ LE  AP    + P  ++++++L R+K
Subjt:  NELKEE--SSNESSYS-NDDSDIDDVVP--------CSGCINVLTKSQENLLDLIESIQDENTRRKMLLKLREELE--APDNDQKKPTYFNFENVLKRLK

Query:  EGDSPSPAKVSDLQMEVRNLKREVAENKQRIASLEYAFARFQ
         G++  P +V DL  EV+ LKREVAENKQR+  LE AF  FQ
Subjt:  EGDSPSPAKVSDLQMEVRNLKREVAENKQRIASLEYAFARFQ

TYJ97599.1 Enzymatic polyprotein [Cucumis melo var. makuwa]4.2e-3748.35Show/hide
Query:  KKKNHSKKSFGKSKRKESSKDYSYKRR-NYGRRKKTFSSKRSTVCFKCKKEGHYANKCPLVKKIHKLEIEEETKQSLLNIL--GDSEMSSDEENSSEDMV
        KK+  SKK F KSK K+       KR  N G+ KK +SSK  T+CFKC ++GHYAN+CPL  KI+ + I+EETKQSLL  +   D   S  E +S ED +
Subjt:  KKKNHSKKSFGKSKRKESSKDYSYKRR-NYGRRKKTFSSKRSTVCFKCKKEGHYANKCPLVKKIHKLEIEEETKQSLLNIL--GDSEMSSDEENSSEDMV

Query:  NELKEE--SSNESSYS-NDDSDIDDVVP--------CSGCINVLTKSQENLLDLIESIQDENTRRKMLLKLREELE--APDNDQKKPTYFNFENVLKRLK
        N L+EE  SS E  YS +D SD +  +P        CSG INV+TK QE L DLIE I DE  +R  LLKL++ LE  AP    + P  ++++++L R+K
Subjt:  NELKEE--SSNESSYS-NDDSDIDDVVP--------CSGCINVLTKSQENLLDLIESIQDENTRRKMLLKLREELE--APDNDQKKPTYFNFENVLKRLK

Query:  EGDSPSPAKVSDLQMEVRNLKREVAENKQRIASLEYAFARFQ
         G++  P +V DL  EV+ LKREVAENKQR+  LE AF  FQ
Subjt:  EGDSPSPAKVSDLQMEVRNLKREVAENKQRIASLEYAFARFQ

TrEMBL top hitse value%identityAlignment
A0A5A7UAJ7 Enzymatic polyprotein7.7e-4549.58Show/hide
Query:  MDNTPPSKKKNHSKKSFGKSKRKESSKDYSYKRRNYGRRK-KTFSSKRSTVCFKCKKEGHYANKCPLVKKIHKLEIEEETKQSLLNILGDSEMSSDEENS
        +DNT PS+KK+HSKK F +SK  ES    + KR+ +G+ K K    K +T CFKC K+GHYAN+CP+VKKI+++EI+E+ KQSLL ++   E+SS+E+  
Subjt:  MDNTPPSKKKNHSKKSFGKSKRKESSKDYSYKRRNYGRRK-KTFSSKRSTVCFKCKKEGHYANKCPLVKKIHKLEIEEETKQSLLNILGDSEMSSDEENS

Query:  S----EDMVNELKEESSNESSYSNDDSDIDDVVPCSGCINVLTKSQENLLDLIESIQDENTRRKMLLKLREELEAPDNDQKKPTYFNFENVLKRLKEGDS
        S    ED++N L EESS E S S +++DI++V+ CSGCI+VLT +Q+ LLD+IE + DE  R+ +LL+LRE+LE PD   K P  F+F+NV+  L + + 
Subjt:  S----EDMVNELKEESSNESSYSNDDSDIDDVVPCSGCINVLTKSQENLLDLIESIQDENTRRKMLLKLREELEAPDNDQKKPTYFNFENVLKRLKEGDS

Query:  PSPAKVSDLQMEVRNLKREVAENKQRIASLEYAFARFQDK
         +P KV+DLQ E++ LK EV ENKQ+I+ LE A    Q++
Subjt:  PSPAKVSDLQMEVRNLKREVAENKQRIASLEYAFARFQDK

A0A5A7UR29 Enzymatic polyprotein5.9e-3747.93Show/hide
Query:  KKKNHSKKSFGKSKRKESSKDYSYKRR-NYGRRKKTFSSKRSTVCFKCKKEGHYANKCPLVKKIHKLEIEEETKQSLLNIL--GDSEMSSDEENSSEDMV
        KK+  SKK F KSK K+       +R  N G+ KK +SSK  T+CFKC ++GHYAN+CPL  KI+ + I+EETKQSLL  +   D   S  E +S ED +
Subjt:  KKKNHSKKSFGKSKRKESSKDYSYKRR-NYGRRKKTFSSKRSTVCFKCKKEGHYANKCPLVKKIHKLEIEEETKQSLLNIL--GDSEMSSDEENSSEDMV

Query:  NELKEE--SSNESSYS-NDDSDIDDVVP--------CSGCINVLTKSQENLLDLIESIQDENTRRKMLLKLREELE--APDNDQKKPTYFNFENVLKRLK
        N L+EE  SS E  YS +D SD +  +P        CSG INV+TK QE L DLIE I DE  +R  LLKL++ LE  AP    + P  ++++++L R+K
Subjt:  NELKEE--SSNESSYS-NDDSDIDDVVP--------CSGCINVLTKSQENLLDLIESIQDENTRRKMLLKLREELE--APDNDQKKPTYFNFENVLKRLK

Query:  EGDSPSPAKVSDLQMEVRNLKREVAENKQRIASLEYAFARFQ
         G++  P +V DL  EV+ LKREVAENKQR+  LE AF  FQ
Subjt:  EGDSPSPAKVSDLQMEVRNLKREVAENKQRIASLEYAFARFQ

A0A5A7UX67 Enzymatic polyprotein2.0e-3748.35Show/hide
Query:  KKKNHSKKSFGKSKRKESSKDYSYKRR-NYGRRKKTFSSKRSTVCFKCKKEGHYANKCPLVKKIHKLEIEEETKQSLLNIL--GDSEMSSDEENSSEDMV
        KK+  SKK F KSK K+       KR  N G+ KK +SSK  T+CFKC ++GHYAN+CPL  KI+ + I+EETKQSLL  +   D   S  E +S ED +
Subjt:  KKKNHSKKSFGKSKRKESSKDYSYKRR-NYGRRKKTFSSKRSTVCFKCKKEGHYANKCPLVKKIHKLEIEEETKQSLLNIL--GDSEMSSDEENSSEDMV

Query:  NELKEE--SSNESSYS-NDDSDIDDVVP--------CSGCINVLTKSQENLLDLIESIQDENTRRKMLLKLREELE--APDNDQKKPTYFNFENVLKRLK
        N L+EE  SS E  YS +D SD +  +P        CSG INV+TK QE L DLIE I DE  +R  LLKL++ LE  AP    + P  ++++++L R+K
Subjt:  NELKEE--SSNESSYS-NDDSDIDDVVP--------CSGCINVLTKSQENLLDLIESIQDENTRRKMLLKLREELE--APDNDQKKPTYFNFENVLKRLK

Query:  EGDSPSPAKVSDLQMEVRNLKREVAENKQRIASLEYAFARFQ
         G++  P +V DL  EV+ LKREVAENKQR+  LE AF  FQ
Subjt:  EGDSPSPAKVSDLQMEVRNLKREVAENKQRIASLEYAFARFQ

A0A5D3BEY3 Enzymatic polyprotein2.0e-3748.35Show/hide
Query:  KKKNHSKKSFGKSKRKESSKDYSYKRR-NYGRRKKTFSSKRSTVCFKCKKEGHYANKCPLVKKIHKLEIEEETKQSLLNIL--GDSEMSSDEENSSEDMV
        KK+  SKK F KSK K+       KR  N G+ KK +SSK  T+CFKC ++GHYAN+CPL  KI+ + I+EETKQSLL  +   D   S  E +S ED +
Subjt:  KKKNHSKKSFGKSKRKESSKDYSYKRR-NYGRRKKTFSSKRSTVCFKCKKEGHYANKCPLVKKIHKLEIEEETKQSLLNIL--GDSEMSSDEENSSEDMV

Query:  NELKEE--SSNESSYS-NDDSDIDDVVP--------CSGCINVLTKSQENLLDLIESIQDENTRRKMLLKLREELE--APDNDQKKPTYFNFENVLKRLK
        N L+EE  SS E  YS +D SD +  +P        CSG INV+TK QE L DLIE I DE  +R  LLKL++ LE  AP    + P  ++++++L R+K
Subjt:  NELKEE--SSNESSYS-NDDSDIDDVVP--------CSGCINVLTKSQENLLDLIESIQDENTRRKMLLKLREELE--APDNDQKKPTYFNFENVLKRLK

Query:  EGDSPSPAKVSDLQMEVRNLKREVAENKQRIASLEYAFARFQ
         G++  P +V DL  EV+ LKREVAENKQR+  LE AF  FQ
Subjt:  EGDSPSPAKVSDLQMEVRNLKREVAENKQRIASLEYAFARFQ

A0A5D3C457 Polyprotein3.7e-3946.25Show/hide
Query:  MDNTPPSKKKNHSKKSFGKSKRKESSKDYSYKRRNYGR-RKKTFSSKRSTVCFKCKKEGHYANKCPLVKKIHKLEIEEETKQSLLNILGDSEMSSDEENS
        +DNT PS+KK+ SKK F +SK  ES    + KR+ +G+ R K    K +T CFKC K+GHYAN+CP+V+KI+ +EI+E+ KQSL  ++   E+SS+EE  
Subjt:  MDNTPPSKKKNHSKKSFGKSKRKESSKDYSYKRRNYGR-RKKTFSSKRSTVCFKCKKEGHYANKCPLVKKIHKLEIEEETKQSLLNILGDSEMSSDEENS

Query:  S----EDMVNELKEESSNESSYSNDDSDIDDVVPCSGCINVLTKSQENLLDLIESIQDENTRRKMLLKLREELEAPDNDQKKPTYFNFENVLKRLKEGDS
        S    ED++N L EESS E S S +++D ++ +   GCINVLT +Q+ LLD+IE + DE  R+K+LL+LRE+LE PD   K P  F+F+ V+  L + + 
Subjt:  S----EDMVNELKEESSNESSYSNDDSDIDDVVPCSGCINVLTKSQENLLDLIESIQDENTRRKMLLKLREELEAPDNDQKKPTYFNFENVLKRLKEGDS

Query:  PSPAKVSDLQMEVRNLKREVAENKQRIASLEYAFARFQDK
         +P KV DL  E+  LK+E+ ENKQ+I+ L+ A    Q++
Subjt:  PSPAKVSDLQMEVRNLKREVAENKQRIASLEYAFARFQDK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACAATACCCCTCCATCAAAGAAGAAGAATCATTCGAAGAAATCTTTTGGGAAAAGTAAGAGAAAAGAATCTTCGAAAGATTACTCTTATAAAAGAAGAAATTACGG
CAGAAGAAAGAAAACATTTTCTTCAAAGCGAAGCACAGTCTGCTTCAAATGCAAAAAGGAGGGACATTATGCTAATAAATGCCCCTTAGTCAAGAAAATTCATAAATTAG
AAATTGAAGAAGAGACAAAACAATCTCTTCTCAATATTCTTGGAGATAGCGAGATGTCTTCCGACGAAGAAAACTCTTCTGAAGACATGGTTAACGAACTAAAAGAAGAA
TCTTCAAATGAATCTTCTTATTCAAATGATGATTCAGACATTGATGATGTCGTTCCTTGCAGTGGATGCATTAATGTCTTAACAAAATCCCAAGAAAATCTTCTGGATTT
AATAGAAAGTATTCAAGACGAGAATACCAGGAGAAAAATGCTTCTAAAACTAAGAGAAGAATTAGAAGCTCCTGATAACGATCAGAAAAAGCCAACCTACTTCAACTTCG
AAAATGTGTTGAAAAGGTTAAAAGAAGGAGATTCTCCCAGTCCTGCAAAAGTCTCAGACTTACAGATGGAGGTGAGAAATCTCAAAAGAGAAGTTGCTGAGAATAAGCAA
CGGATAGCTAGTCTTGAATATGCCTTTGCAAGATTTCAAGACAAGGCCAAGACAACAACATTGATGACTGCCGCAGAGGTTCCACAACAAACAGCTAGTTCTCCTGGAAC
TAGTTCTCAAAGGGGAAAACGCCCCATTACTCAAACATCTGCACTTCCACCCATGAATGCAGACAATTATGCGATGGACCTTGAATTTGAGACAGTGTCCAGACGCAGAC
AAGGTTCCTCCTCCAGGAACTTATCAAGGACAGGGGAAAGTCGTAGTCAAGTTTCCTCTTCCCATATCTCAAACAGGCCCTCATCGCCTTCTACAGCATCCGGTTCGAAT
CCAAAGAGGACTCAATCTAAATTCCTTAAGGCTAATCCACATCATTCACGAGCAGAAGAAGAACAACTTCTTCTTCAAAGAAGCTCGCTTATTTCCTCTTTAGTCAGAGT
GTCCACTACCTCTGAGCTACAGACGGTCATTCAGGGAGCAACTCAAAGAGAAGACGACAATGCTCCAGTTCAAGAAGGAATTCCCAAAAATGATGATATTATTTCGGAGT
CTTCCGTCAATGATATCGAATTTGAATATGATCCATATTTAAATTTTGATATCCTAGACCCATACTATGATTCCCAACCGGGATAA
mRNA sequenceShow/hide mRNA sequence
ATGGACAATACCCCTCCATCAAAGAAGAAGAATCATTCGAAGAAATCTTTTGGGAAAAGTAAGAGAAAAGAATCTTCGAAAGATTACTCTTATAAAAGAAGAAATTACGG
CAGAAGAAAGAAAACATTTTCTTCAAAGCGAAGCACAGTCTGCTTCAAATGCAAAAAGGAGGGACATTATGCTAATAAATGCCCCTTAGTCAAGAAAATTCATAAATTAG
AAATTGAAGAAGAGACAAAACAATCTCTTCTCAATATTCTTGGAGATAGCGAGATGTCTTCCGACGAAGAAAACTCTTCTGAAGACATGGTTAACGAACTAAAAGAAGAA
TCTTCAAATGAATCTTCTTATTCAAATGATGATTCAGACATTGATGATGTCGTTCCTTGCAGTGGATGCATTAATGTCTTAACAAAATCCCAAGAAAATCTTCTGGATTT
AATAGAAAGTATTCAAGACGAGAATACCAGGAGAAAAATGCTTCTAAAACTAAGAGAAGAATTAGAAGCTCCTGATAACGATCAGAAAAAGCCAACCTACTTCAACTTCG
AAAATGTGTTGAAAAGGTTAAAAGAAGGAGATTCTCCCAGTCCTGCAAAAGTCTCAGACTTACAGATGGAGGTGAGAAATCTCAAAAGAGAAGTTGCTGAGAATAAGCAA
CGGATAGCTAGTCTTGAATATGCCTTTGCAAGATTTCAAGACAAGGCCAAGACAACAACATTGATGACTGCCGCAGAGGTTCCACAACAAACAGCTAGTTCTCCTGGAAC
TAGTTCTCAAAGGGGAAAACGCCCCATTACTCAAACATCTGCACTTCCACCCATGAATGCAGACAATTATGCGATGGACCTTGAATTTGAGACAGTGTCCAGACGCAGAC
AAGGTTCCTCCTCCAGGAACTTATCAAGGACAGGGGAAAGTCGTAGTCAAGTTTCCTCTTCCCATATCTCAAACAGGCCCTCATCGCCTTCTACAGCATCCGGTTCGAAT
CCAAAGAGGACTCAATCTAAATTCCTTAAGGCTAATCCACATCATTCACGAGCAGAAGAAGAACAACTTCTTCTTCAAAGAAGCTCGCTTATTTCCTCTTTAGTCAGAGT
GTCCACTACCTCTGAGCTACAGACGGTCATTCAGGGAGCAACTCAAAGAGAAGACGACAATGCTCCAGTTCAAGAAGGAATTCCCAAAAATGATGATATTATTTCGGAGT
CTTCCGTCAATGATATCGAATTTGAATATGATCCATATTTAAATTTTGATATCCTAGACCCATACTATGATTCCCAACCGGGATAA
Protein sequenceShow/hide protein sequence
MDNTPPSKKKNHSKKSFGKSKRKESSKDYSYKRRNYGRRKKTFSSKRSTVCFKCKKEGHYANKCPLVKKIHKLEIEEETKQSLLNILGDSEMSSDEENSSEDMVNELKEE
SSNESSYSNDDSDIDDVVPCSGCINVLTKSQENLLDLIESIQDENTRRKMLLKLREELEAPDNDQKKPTYFNFENVLKRLKEGDSPSPAKVSDLQMEVRNLKREVAENKQ
RIASLEYAFARFQDKAKTTTLMTAAEVPQQTASSPGTSSQRGKRPITQTSALPPMNADNYAMDLEFETVSRRRQGSSSRNLSRTGESRSQVSSSHISNRPSSPSTASGSN
PKRTQSKFLKANPHHSRAEEEQLLLQRSSLISSLVRVSTTSELQTVIQGATQREDDNAPVQEGIPKNDDIISESSVNDIEFEYDPYLNFDILDPYYDSQPG