| GenBank top hits | e value | %identity | Alignment |
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| KAA0025945.1 gag/pol protein [Cucumis melo var. makuwa] | 1.2e-83 | 63.95 | Show/hide |
Query: MVLSMMSYAHLPSSFWGYAVETAVYVLNSVPSKT--------------------------HVLVTNPKKLDSRSKLCLFIGYPKETRGGLFYDLKENKVF
MV SMMSYA LPSSFWGYAVETAV++LN+VPSK+ HVLVTNPKKL+ RS+LC F+GYPKETRGGLF+D +EN+VF
Subjt: MVLSMMSYAHLPSSFWGYAVETAVYVLNSVPSKT--------------------------HVLVTNPKKLDSRSKLCLFIGYPKETRGGLFYDLKENKVF
Query: VSTNAIFLEEDHIRDHKPKSKVVLSELDGTIAKVAKKNTSTSTRVVDTSLSSQESPSQELSMPRRSGRVVIQPNRYMGLAETQVVIPDDNCEDPLTYNQA
VSTNA FLEEDH+R+HKP+SK+VLSE +V + S+RV +T+ S Q PSQ L MPRRSGRVV QPNRY+GL ETQVVIPDD EDPL+Y QA
Subjt: VSTNAIFLEEDHIRDHKPKSKVVLSELDGTIAKVAKKNTSTSTRVVDTSLSSQESPSQELSMPRRSGRVVIQPNRYMGLAETQVVIPDDNCEDPLTYNQA
Query: MVDKDKDKWVIAMDQEMESMYFNSVWDLVDKPDGVKPIGCKWIYKRKRGVDGRCKPLK
M D DKD+WV AMD EMESMYFNSVW+LVD P+GVKPIGCKWIYKRKR G+ + K
Subjt: MVDKDKDKWVIAMDQEMESMYFNSVWDLVDKPDGVKPIGCKWIYKRKRGVDGRCKPLK
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| KAA0035907.1 gag/pol protein [Cucumis melo var. makuwa] | 4.2e-84 | 64.34 | Show/hide |
Query: MVLSMMSYAHLPSSFWGYAVETAVYVLNSVPSKT--------------------------HVLVTNPKKLDSRSKLCLFIGYPKETRGGLFYDLKENKVF
MV SMMSYA LPSSFWGYAVETAV++LN+VPSK+ HVLVTNPKKL+ RS+LC F+GYPKETRGGLF+D KEN+VF
Subjt: MVLSMMSYAHLPSSFWGYAVETAVYVLNSVPSKT--------------------------HVLVTNPKKLDSRSKLCLFIGYPKETRGGLFYDLKENKVF
Query: VSTNAIFLEEDHIRDHKPKSKVVLSELDGTIAKVAKKNTSTSTRVVDTSLSSQESPSQELSMPRRSGRVVIQPNRYMGLAETQVVIPDDNCEDPLTYNQA
VSTNA FLEEDH+R+HKP+SK+VLSE +V + S+RV +T+ S Q PSQ L MPRRSGRVV QPNRY+GL ETQVVIPDD EDPL+Y QA
Subjt: VSTNAIFLEEDHIRDHKPKSKVVLSELDGTIAKVAKKNTSTSTRVVDTSLSSQESPSQELSMPRRSGRVVIQPNRYMGLAETQVVIPDDNCEDPLTYNQA
Query: MVDKDKDKWVIAMDQEMESMYFNSVWDLVDKPDGVKPIGCKWIYKRKRGVDGRCKPLK
M D DKD+WV AMD EMESMYFNSVW+LVD P+GVKPIGCKWIYKRKR G+ + K
Subjt: MVDKDKDKWVIAMDQEMESMYFNSVWDLVDKPDGVKPIGCKWIYKRKRGVDGRCKPLK
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| KAA0059226.1 gag/pol protein [Cucumis melo var. makuwa] | 1.2e-83 | 63.95 | Show/hide |
Query: MVLSMMSYAHLPSSFWGYAVETAVYVLNSVPSKT--------------------------HVLVTNPKKLDSRSKLCLFIGYPKETRGGLFYDLKENKVF
MV SMMSYA LPSSFWGYAVETAV++LN+VPSK+ HVLVTNPKKL+ RS+LC F+GYPKETRGGLF+D +EN+VF
Subjt: MVLSMMSYAHLPSSFWGYAVETAVYVLNSVPSKT--------------------------HVLVTNPKKLDSRSKLCLFIGYPKETRGGLFYDLKENKVF
Query: VSTNAIFLEEDHIRDHKPKSKVVLSELDGTIAKVAKKNTSTSTRVVDTSLSSQESPSQELSMPRRSGRVVIQPNRYMGLAETQVVIPDDNCEDPLTYNQA
VSTNA FLEEDH+R+HKP+SK+VLSE +V + S+RV +T+ S Q PSQ L MPRRSGRVV QPNRY+GL ETQVVIPDD EDPL+Y QA
Subjt: VSTNAIFLEEDHIRDHKPKSKVVLSELDGTIAKVAKKNTSTSTRVVDTSLSSQESPSQELSMPRRSGRVVIQPNRYMGLAETQVVIPDDNCEDPLTYNQA
Query: MVDKDKDKWVIAMDQEMESMYFNSVWDLVDKPDGVKPIGCKWIYKRKRGVDGRCKPLK
M D DKD+WV AMD EMESMYFNSVW+LVD P+GVKPIGCKWIYKRKR G+ + K
Subjt: MVDKDKDKWVIAMDQEMESMYFNSVWDLVDKPDGVKPIGCKWIYKRKRGVDGRCKPLK
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| TYK02840.1 gag/pol protein [Cucumis melo var. makuwa] | 1.2e-83 | 63.95 | Show/hide |
Query: MVLSMMSYAHLPSSFWGYAVETAVYVLNSVPSKT--------------------------HVLVTNPKKLDSRSKLCLFIGYPKETRGGLFYDLKENKVF
MV SMMSYA LPSSFWGYAVETAV++LN+VPSK+ HVLVTNPKKL+ RS+LC F+GYPKETRGGLF+D +EN+VF
Subjt: MVLSMMSYAHLPSSFWGYAVETAVYVLNSVPSKT--------------------------HVLVTNPKKLDSRSKLCLFIGYPKETRGGLFYDLKENKVF
Query: VSTNAIFLEEDHIRDHKPKSKVVLSELDGTIAKVAKKNTSTSTRVVDTSLSSQESPSQELSMPRRSGRVVIQPNRYMGLAETQVVIPDDNCEDPLTYNQA
VSTNA FLEEDH+R+HKP+SK+VLSE +V + S+RV +T+ S Q PSQ L MPRRSGRVV QPNRY+GL ETQVVIPDD EDPL+Y QA
Subjt: VSTNAIFLEEDHIRDHKPKSKVVLSELDGTIAKVAKKNTSTSTRVVDTSLSSQESPSQELSMPRRSGRVVIQPNRYMGLAETQVVIPDDNCEDPLTYNQA
Query: MVDKDKDKWVIAMDQEMESMYFNSVWDLVDKPDGVKPIGCKWIYKRKRGVDGRCKPLK
M D DKD+WV AMD EMESMYFNSVW+LVD P+GVKPIGCKWIYKRKR G+ + K
Subjt: MVDKDKDKWVIAMDQEMESMYFNSVWDLVDKPDGVKPIGCKWIYKRKRGVDGRCKPLK
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| TYK15984.1 gag/pol protein [Cucumis melo var. makuwa] | 1.6e-83 | 63.95 | Show/hide |
Query: MVLSMMSYAHLPSSFWGYAVETAVYVLNSVPSKT--------------------------HVLVTNPKKLDSRSKLCLFIGYPKETRGGLFYDLKENKVF
MV SMMSYA LPSSFWGYAVETAV++LN+VPSK+ HVLVTNPKKL+ RS+LC F+GYPKETRGGLF+D +EN+VF
Subjt: MVLSMMSYAHLPSSFWGYAVETAVYVLNSVPSKT--------------------------HVLVTNPKKLDSRSKLCLFIGYPKETRGGLFYDLKENKVF
Query: VSTNAIFLEEDHIRDHKPKSKVVLSELDGTIAKVAKKNTSTSTRVVDTSLSSQESPSQELSMPRRSGRVVIQPNRYMGLAETQVVIPDDNCEDPLTYNQA
VSTNA FLEEDH+R+HKP+SK+VLSE +V + S+RV +T+ S Q PSQ L MPRRSGRVV QPNRY+GL ETQVVIPDD EDPL+Y QA
Subjt: VSTNAIFLEEDHIRDHKPKSKVVLSELDGTIAKVAKKNTSTSTRVVDTSLSSQESPSQELSMPRRSGRVVIQPNRYMGLAETQVVIPDDNCEDPLTYNQA
Query: MVDKDKDKWVIAMDQEMESMYFNSVWDLVDKPDGVKPIGCKWIYKRKRGVDGRCKPLK
M D DKD+WV AMD EMESMYFNSVW+LVD P+GVKPIGCKWIYKRKR G+ + K
Subjt: MVDKDKDKWVIAMDQEMESMYFNSVWDLVDKPDGVKPIGCKWIYKRKRGVDGRCKPLK
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7T2V9 Gag/pol protein | 2.0e-84 | 64.34 | Show/hide |
Query: MVLSMMSYAHLPSSFWGYAVETAVYVLNSVPSKT--------------------------HVLVTNPKKLDSRSKLCLFIGYPKETRGGLFYDLKENKVF
MV SMMSYA LPSSFWGYAVETAV++LN+VPSK+ HVLVTNPKKL+ RS+LC F+GYPKETRGGLF+D KEN+VF
Subjt: MVLSMMSYAHLPSSFWGYAVETAVYVLNSVPSKT--------------------------HVLVTNPKKLDSRSKLCLFIGYPKETRGGLFYDLKENKVF
Query: VSTNAIFLEEDHIRDHKPKSKVVLSELDGTIAKVAKKNTSTSTRVVDTSLSSQESPSQELSMPRRSGRVVIQPNRYMGLAETQVVIPDDNCEDPLTYNQA
VSTNA FLEEDH+R+HKP+SK+VLSE +V + S+RV +T+ S Q PSQ L MPRRSGRVV QPNRY+GL ETQVVIPDD EDPL+Y QA
Subjt: VSTNAIFLEEDHIRDHKPKSKVVLSELDGTIAKVAKKNTSTSTRVVDTSLSSQESPSQELSMPRRSGRVVIQPNRYMGLAETQVVIPDDNCEDPLTYNQA
Query: MVDKDKDKWVIAMDQEMESMYFNSVWDLVDKPDGVKPIGCKWIYKRKRGVDGRCKPLK
M D DKD+WV AMD EMESMYFNSVW+LVD P+GVKPIGCKWIYKRKR G+ + K
Subjt: MVDKDKDKWVIAMDQEMESMYFNSVWDLVDKPDGVKPIGCKWIYKRKRGVDGRCKPLK
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| A0A5A7TZD0 Gag/pol protein | 5.9e-84 | 63.95 | Show/hide |
Query: MVLSMMSYAHLPSSFWGYAVETAVYVLNSVPSKT--------------------------HVLVTNPKKLDSRSKLCLFIGYPKETRGGLFYDLKENKVF
MV SMMSYA LPSSFWGYAVETAV++LN+VPSK+ HVLVTNPKKL+ RS+LC F+GYPKETRGGLF+D +EN+VF
Subjt: MVLSMMSYAHLPSSFWGYAVETAVYVLNSVPSKT--------------------------HVLVTNPKKLDSRSKLCLFIGYPKETRGGLFYDLKENKVF
Query: VSTNAIFLEEDHIRDHKPKSKVVLSELDGTIAKVAKKNTSTSTRVVDTSLSSQESPSQELSMPRRSGRVVIQPNRYMGLAETQVVIPDDNCEDPLTYNQA
VSTNA FLEEDH+R+HKP+SK+VLSE +V + S+RV +T+ S Q PSQ L MPRRSGRVV QPNRY+GL ETQVVIPDD EDPL+Y QA
Subjt: VSTNAIFLEEDHIRDHKPKSKVVLSELDGTIAKVAKKNTSTSTRVVDTSLSSQESPSQELSMPRRSGRVVIQPNRYMGLAETQVVIPDDNCEDPLTYNQA
Query: MVDKDKDKWVIAMDQEMESMYFNSVWDLVDKPDGVKPIGCKWIYKRKRGVDGRCKPLK
M D DKD+WV AMD EMESMYFNSVW+LVD P+GVKPIGCKWIYKRKR G+ + K
Subjt: MVDKDKDKWVIAMDQEMESMYFNSVWDLVDKPDGVKPIGCKWIYKRKRGVDGRCKPLK
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| A0A5A7UYE8 Gag/pol protein | 5.9e-84 | 63.95 | Show/hide |
Query: MVLSMMSYAHLPSSFWGYAVETAVYVLNSVPSKT--------------------------HVLVTNPKKLDSRSKLCLFIGYPKETRGGLFYDLKENKVF
MV SMMSYA LPSSFWGYAVETAV++LN+VPSK+ HVLVTNPKKL+ RS+LC F+GYPKETRGGLF+D +EN+VF
Subjt: MVLSMMSYAHLPSSFWGYAVETAVYVLNSVPSKT--------------------------HVLVTNPKKLDSRSKLCLFIGYPKETRGGLFYDLKENKVF
Query: VSTNAIFLEEDHIRDHKPKSKVVLSELDGTIAKVAKKNTSTSTRVVDTSLSSQESPSQELSMPRRSGRVVIQPNRYMGLAETQVVIPDDNCEDPLTYNQA
VSTNA FLEEDH+R+HKP+SK+VLSE +V + S+RV +T+ S Q PSQ L MPRRSGRVV QPNRY+GL ETQVVIPDD EDPL+Y QA
Subjt: VSTNAIFLEEDHIRDHKPKSKVVLSELDGTIAKVAKKNTSTSTRVVDTSLSSQESPSQELSMPRRSGRVVIQPNRYMGLAETQVVIPDDNCEDPLTYNQA
Query: MVDKDKDKWVIAMDQEMESMYFNSVWDLVDKPDGVKPIGCKWIYKRKRGVDGRCKPLK
M D DKD+WV AMD EMESMYFNSVW+LVD P+GVKPIGCKWIYKRKR G+ + K
Subjt: MVDKDKDKWVIAMDQEMESMYFNSVWDLVDKPDGVKPIGCKWIYKRKRGVDGRCKPLK
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| A0A5D3BUN8 Gag/pol protein | 5.9e-84 | 63.95 | Show/hide |
Query: MVLSMMSYAHLPSSFWGYAVETAVYVLNSVPSKT--------------------------HVLVTNPKKLDSRSKLCLFIGYPKETRGGLFYDLKENKVF
MV SMMSYA LPSSFWGYAVETAV++LN+VPSK+ HVLVTNPKKL+ RS+LC F+GYPKETRGGLF+D +EN+VF
Subjt: MVLSMMSYAHLPSSFWGYAVETAVYVLNSVPSKT--------------------------HVLVTNPKKLDSRSKLCLFIGYPKETRGGLFYDLKENKVF
Query: VSTNAIFLEEDHIRDHKPKSKVVLSELDGTIAKVAKKNTSTSTRVVDTSLSSQESPSQELSMPRRSGRVVIQPNRYMGLAETQVVIPDDNCEDPLTYNQA
VSTNA FLEEDH+R+HKP+SK+VLSE +V + S+RV +T+ S Q PSQ L MPRRSGRVV QPNRY+GL ETQVVIPDD EDPL+Y QA
Subjt: VSTNAIFLEEDHIRDHKPKSKVVLSELDGTIAKVAKKNTSTSTRVVDTSLSSQESPSQELSMPRRSGRVVIQPNRYMGLAETQVVIPDDNCEDPLTYNQA
Query: MVDKDKDKWVIAMDQEMESMYFNSVWDLVDKPDGVKPIGCKWIYKRKRGVDGRCKPLK
M D DKD+WV AMD EMESMYFNSVW+LVD P+GVKPIGCKWIYKRKR G+ + K
Subjt: MVDKDKDKWVIAMDQEMESMYFNSVWDLVDKPDGVKPIGCKWIYKRKRGVDGRCKPLK
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| A0A5D3CYF4 Gag/pol protein | 7.8e-84 | 63.95 | Show/hide |
Query: MVLSMMSYAHLPSSFWGYAVETAVYVLNSVPSKT--------------------------HVLVTNPKKLDSRSKLCLFIGYPKETRGGLFYDLKENKVF
MV SMMSYA LPSSFWGYAVETAV++LN+VPSK+ HVLVTNPKKL+ RS+LC F+GYPKETRGGLF+D +EN+VF
Subjt: MVLSMMSYAHLPSSFWGYAVETAVYVLNSVPSKT--------------------------HVLVTNPKKLDSRSKLCLFIGYPKETRGGLFYDLKENKVF
Query: VSTNAIFLEEDHIRDHKPKSKVVLSELDGTIAKVAKKNTSTSTRVVDTSLSSQESPSQELSMPRRSGRVVIQPNRYMGLAETQVVIPDDNCEDPLTYNQA
VSTNA FLEEDH+R+HKP+SK+VLSE +V + S+RV +T+ S Q PSQ L MPRRSGRVV QPNRY+GL ETQVVIPDD EDPL+Y QA
Subjt: VSTNAIFLEEDHIRDHKPKSKVVLSELDGTIAKVAKKNTSTSTRVVDTSLSSQESPSQELSMPRRSGRVVIQPNRYMGLAETQVVIPDDNCEDPLTYNQA
Query: MVDKDKDKWVIAMDQEMESMYFNSVWDLVDKPDGVKPIGCKWIYKRKRGVDGRCKPLK
M D DKD+WV AMD EMESMYFNSVW+LVD P+GVKPIGCKWIYKRKR G+ + K
Subjt: MVDKDKDKWVIAMDQEMESMYFNSVWDLVDKPDGVKPIGCKWIYKRKRGVDGRCKPLK
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| SwissProt top hits | e value | %identity | Alignment |
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.4e-18 | 29.18 | Show/hide |
Query: VLSMMSYAHLPSSFWGYAVETAVYVLNSVPSK-----------------------------THVLVTNPKKLDSRSKLCLFIGYPKETRGGLFYDLKENK
V SM+ A LP SFWG AV+TA Y++N PS HV KLD +S C+FIGY E G +D + K
Subjt: VLSMMSYAHLPSSFWGYAVETAVYVLNSVPSK-----------------------------THVLVTNPKKLDSRSKLCLFIGYPKETRGGLFYDLKENK
Query: VFVSTNAIFLEEDHIRDHKPKSKVVLSELDGTIAKVAKKNTSTSTRVVDTSLSSQ---------------------ESPSQ--ELSMP-RRSGRVVIQPN
V S + +F E + KV + + + N TS +S Q E P+Q E P RRS R ++
Subjt: VFVSTNAIFLEEDHIRDHKPKSKVVLSELDGTIAKVAKKNTSTSTRVVDTSLSSQ---------------------ESPSQ--ELSMP-RRSGRVVIQPN
Query: RYMGLAETQVVIPDDNCEDPLTYNQAMVDKDKDKWVIAMDQEMESMYFNSVWDLVDKPDGVKPIGCKWIYKRKRGVDGRCK
RY + V+I DD +P + + + +K++ + AM +EMES+ N + LV+ P G +P+ CKW++K K+ DG CK
Subjt: RYMGLAETQVVIPDDNCEDPLTYNQAMVDKDKDKWVIAMDQEMESMYFNSVWDLVDKPDGVKPIGCKWIYKRKRGVDGRCK
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| P92520 Uncharacterized mitochondrial protein AtMg00820 | 1.0e-03 | 38 | Show/hide |
Query: WVIAMDQEMESMYFNSVWDLVDKPDGVKPIGCKWIYKRKRGVDGRCKPLK
W AM +E++++ N W LV P +GCKW++K K DG LK
Subjt: WVIAMDQEMESMYFNSVWDLVDKPDGVKPIGCKWIYKRKRGVDGRCKPLK
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 7.7e-04 | 24.55 | Show/hide |
Query: LSMMSYAHLPSSFWGYAVETAVYVLNSVPSKTHVLVT-----------------------------NPKKLDSRSKLCLFIGYPKETRGGLFYDLKENKV
L+++S+A +P ++W YA AVY++N +P+ L + N KLD +S+ C+F+GY L L+ +++
Subjt: LSMMSYAHLPSSFWGYAVETAVYVLNSVPSKTHVLVT-----------------------------NPKKLDSRSKLCLFIGYPKETRGGLFYDLKENKV
Query: FVSTNAIFLE
++S + F E
Subjt: FVSTNAIFLE
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