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Tan0003507 (gene) of Snake gourd v1 genome

Gene IDTan0003507
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG04:72821983..72823608
RNA-Seq ExpressionTan0003507
SyntenyTan0003507
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607028.1 hypothetical protein SDJN03_00370, partial [Cucurbita argyrosperma subsp. sororia]4.1e-3271.19Show/hide
Query:  MAAAALMIPATMAIMILLLNPTGCPAFTSFKPLVNKDTS----GLVGDQDIESEFQMESHISRMLVETQTFETSATSNATEPAVGDCDRPPRYDSCLGEK
        MAAAALMI A   I+ILLLNPTGC            DTS     LVGD++IESEF M  HISR+L E+Q FETSATSNATEPAVG+CDRPPRYDSCLGEK
Subjt:  MAAAALMIPATMAIMILLLNPTGCPAFTSFKPLVNKDTS----GLVGDQDIESEFQMESHISRMLVETQTFETSATSNATEPAVGDCDRPPRYDSCLGEK

Query:  RSTPPPENCGTFNREKPC
        RSTPPPENCG FNRE PC
Subjt:  RSTPPPENCGTFNREKPC

KAG6607029.1 hypothetical protein SDJN03_00371, partial [Cucurbita argyrosperma subsp. sororia]1.1e-3266.95Show/hide
Query:  MAAAALMIPATMAIMILLLNPTGCPAFTSFKPLVNKDTSG----LVGDQDIESEFQMESHISRMLVETQTFETSATSNATEPAVGDCDRPPRYDSCLGEK
        MAAAA++IPA MAIMILLLNPT   A TSFKPL N DTS     L+GDQDI+SEF MESHISR+L  +Q F+TS T++A + + G C RPPRYDSCLG+K
Subjt:  MAAAALMIPATMAIMILLLNPTGCPAFTSFKPLVNKDTSG----LVGDQDIESEFQMESHISRMLVETQTFETSATSNATEPAVGDCDRPPRYDSCLGEK

Query:  RSTPPPENCGTFNREKPC
         + PPPENCGTFNR  PC
Subjt:  RSTPPPENCGTFNREKPC

XP_022948338.1 uncharacterized protein LOC111452044 [Cucurbita moschata]1.8e-3266.1Show/hide
Query:  MAAAALMIPATMAIMILLLNPTGCPAFTSFKPLVNKDTSG----LVGDQDIESEFQMESHISRMLVETQTFETSATSNATEPAVGDCDRPPRYDSCLGEK
        MAAAA++IPA MAIMILLLNPT   A TSFKPL N DTS     L+GDQD++SEF MESHISR+L  +Q F+TS T++A + + G C RPPRYDSCLG+K
Subjt:  MAAAALMIPATMAIMILLLNPTGCPAFTSFKPLVNKDTSG----LVGDQDIESEFQMESHISRMLVETQTFETSATSNATEPAVGDCDRPPRYDSCLGEK

Query:  RSTPPPENCGTFNREKPC
         + PPPENCGTFNR  PC
Subjt:  RSTPPPENCGTFNREKPC

XP_022998105.1 uncharacterized protein LOC111492854 [Cucurbita maxima]2.8e-3366.95Show/hide
Query:  MAAAALMIPATMAIMILLLNPTGCPAFTSFKPLVNKDTSG----LVGDQDIESEFQMESHISRMLVETQTFETSATSNATEPAVGDCDRPPRYDSCLGEK
        MAAAA+MIPA MAIMILLLNPT   A T+FKPL N DTS     L+GDQDI+SEF MESHISR+L  +Q F+TS T++A + + G C+RPPRYDSCLG+K
Subjt:  MAAAALMIPATMAIMILLLNPTGCPAFTSFKPLVNKDTSG----LVGDQDIESEFQMESHISRMLVETQTFETSATSNATEPAVGDCDRPPRYDSCLGEK

Query:  RSTPPPENCGTFNREKPC
         + PPPENCGTFNR  PC
Subjt:  RSTPPPENCGTFNREKPC

XP_023523220.1 uncharacterized protein LOC111787479 [Cucurbita pepo subsp. pepo]6.9e-3266.1Show/hide
Query:  MAAAALMIPATMAIMILLLNPTGCPAFTSFKPLVNKDTSG----LVGDQDIESEFQMESHISRMLVETQTFETSATSNATEPAVGDCDRPPRYDSCLGEK
        MA AA MIPA MAIMILLLNP    A TSFKPL N DTS     L+GDQDI+SEF MESHISR+L  +Q F+TS T++A + + G C RPPRYDSCLG+K
Subjt:  MAAAALMIPATMAIMILLLNPTGCPAFTSFKPLVNKDTSG----LVGDQDIESEFQMESHISRMLVETQTFETSATSNATEPAVGDCDRPPRYDSCLGEK

Query:  RSTPPPENCGTFNREKPC
         + PPPENCGTFNR  PC
Subjt:  RSTPPPENCGTFNREKPC

TrEMBL top hitse value%identityAlignment
A0A0A0L711 Uncharacterized protein4.4e-3264.1Show/hide
Query:  AAALMIPATMAIMILLLNPTGC-PAFTSFKPLVNKDTSGL----VGDQDIESEFQMESHISRMLVETQTFETSATSNATEPAVGDCDRPPRYDSCLGEKR
        A ALMIPA MA+M+++L PT C  A TSFKPL N  + GL    V ++DI+S F MESHISRML ++Q FETS+T+NAT+ + G+CDRPPRYDSCLG KR
Subjt:  AAALMIPATMAIMILLLNPTGC-PAFTSFKPLVNKDTSGL----VGDQDIESEFQMESHISRMLVETQTFETSATSNATEPAVGDCDRPPRYDSCLGEKR

Query:  STPPPENCGTFNREKPC
        +TPPP+NC TFNRE PC
Subjt:  STPPPENCGTFNREKPC

A0A5D3BS53 Uncharacterized protein9.5e-2754.62Show/hide
Query:  MAAAALMIPATMAIMILLLN-PTGCPAFTSFKPLVNKDTSG----LVGDQDIESEFQMESHISRMLVETQTFETSATSNATEPAVGDCDRPPRYDSCLGE
        M A+A MIPA +  MILLLN P+ C A T+F+PL++  TS     +VG++D++ EF MESHISR+L  +Q F+T++T +A + + G C RPPRYDSCLG+
Subjt:  MAAAALMIPATMAIMILLLN-PTGCPAFTSFKPLVNKDTSG----LVGDQDIESEFQMESHISRMLVETQTFETSATSNATEPAVGDCDRPPRYDSCLGE

Query:  KRSTPPPENCGTFNREKPC
        KR+ PPP NCGT+NR  PC
Subjt:  KRSTPPPENCGTFNREKPC

A0A6J1CP71 uncharacterized protein LOC1110132783.5e-2960.17Show/hide
Query:  MAAAALMIPATMAIMILLLNPTGCPAFTSFKPLVNKDTSG----LVGDQDIESEFQMESHISRMLVETQTFETSATSNATEPAVGDCDRPPRYDSCLGEK
        MA AA+MIP  MA+ ILL NP  C A T+ K L+N +T G    L+GD+DI SEF ME H+SR+L E+  F+T  T NA   +V DC+RPPRYDSCLGEK
Subjt:  MAAAALMIPATMAIMILLLNPTGCPAFTSFKPLVNKDTSG----LVGDQDIESEFQMESHISRMLVETQTFETSATSNATEPAVGDCDRPPRYDSCLGEK

Query:  RSTPPPENCGTFNREKPC
        R+TPP ENCGTFNR  PC
Subjt:  RSTPPPENCGTFNREKPC

A0A6J1G927 uncharacterized protein LOC1114520448.8e-3366.1Show/hide
Query:  MAAAALMIPATMAIMILLLNPTGCPAFTSFKPLVNKDTSG----LVGDQDIESEFQMESHISRMLVETQTFETSATSNATEPAVGDCDRPPRYDSCLGEK
        MAAAA++IPA MAIMILLLNPT   A TSFKPL N DTS     L+GDQD++SEF MESHISR+L  +Q F+TS T++A + + G C RPPRYDSCLG+K
Subjt:  MAAAALMIPATMAIMILLLNPTGCPAFTSFKPLVNKDTSG----LVGDQDIESEFQMESHISRMLVETQTFETSATSNATEPAVGDCDRPPRYDSCLGEK

Query:  RSTPPPENCGTFNREKPC
         + PPPENCGTFNR  PC
Subjt:  RSTPPPENCGTFNREKPC

A0A6J1KBP5 uncharacterized protein LOC1114928541.4e-3366.95Show/hide
Query:  MAAAALMIPATMAIMILLLNPTGCPAFTSFKPLVNKDTSG----LVGDQDIESEFQMESHISRMLVETQTFETSATSNATEPAVGDCDRPPRYDSCLGEK
        MAAAA+MIPA MAIMILLLNPT   A T+FKPL N DTS     L+GDQDI+SEF MESHISR+L  +Q F+TS T++A + + G C+RPPRYDSCLG+K
Subjt:  MAAAALMIPATMAIMILLLNPTGCPAFTSFKPLVNKDTSG----LVGDQDIESEFQMESHISRMLVETQTFETSATSNATEPAVGDCDRPPRYDSCLGEK

Query:  RSTPPPENCGTFNREKPC
         + PPPENCGTFNR  PC
Subjt:  RSTPPPENCGTFNREKPC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCAGCGGCGCTGATGATACCGGCCACCATGGCGATCATGATTCTGTTGCTCAATCCAACTGGATGCCCTGCTTTTACGTCTTTTAAACCACTCGTCAACAAGGA
CACTTCCGGCCTGGTCGGAGACCAAGATATTGAGTCAGAGTTTCAGATGGAGTCGCACATCAGCAGAATGTTGGTAGAAACCCAAACTTTCGAAACCAGCGCCACTAGCA
ATGCCACTGAACCTGCCGTCGGCGATTGCGACCGGCCGCCACGCTACGACAGTTGCCTTGGCGAGAAAAGAAGTACTCCGCCGCCGGAAAATTGTGGCACCTTCAATCGC
GAAAAACCCTGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGCAGCGGCGCTGATGATACCGGCCACCATGGCGATCATGATTCTGTTGCTCAATCCAACTGGATGCCCTGCTTTTACGTCTTTTAAACCACTCGTCAACAAGGA
CACTTCCGGCCTGGTCGGAGACCAAGATATTGAGTCAGAGTTTCAGATGGAGTCGCACATCAGCAGAATGTTGGTAGAAACCCAAACTTTCGAAACCAGCGCCACTAGCA
ATGCCACTGAACCTGCCGTCGGCGATTGCGACCGGCCGCCACGCTACGACAGTTGCCTTGGCGAGAAAAGAAGTACTCCGCCGCCGGAAAATTGTGGCACCTTCAATCGC
GAAAAACCCTGTTAA
Protein sequenceShow/hide protein sequence
MAAAALMIPATMAIMILLLNPTGCPAFTSFKPLVNKDTSGLVGDQDIESEFQMESHISRMLVETQTFETSATSNATEPAVGDCDRPPRYDSCLGEKRSTPPPENCGTFNR
EKPC