CuGenDBv2

Gene ID	Tan0003528
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Tetratricopeptide repeat (TPR)-like superfamily protein
Genome location	LG04:88136710..88148469
RNA-Seq Expression	Tan0003528
Synteny	Tan0003528
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component) GO:0005515 - protein binding (molecular function)
InterPro domains	IPR011990 - Tetratricopeptide-like helical domain superfamily IPR019734 - Tetratricopeptide repeat

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6581757.1 hypothetical protein SDJN03_21759, partial [Cucurbita argyrosperma subsp. sororia]

1.2e-75

86.71

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Query:  ELGDYARAASLLEDLIKEKSDDSDIFRLLGEVKYKLKDYKGSIAAYKSATMVSKDVNFEVLRGLTNALLAAGKPDEAVQFLLDSRERLKSMKLGSMAEGK
        ELG YA AASLLEDLIK KSDDSDIFRLLGEVKYKLKDY GSIAAYKSAT +S+DVNFEVLRGLTNALLAAGKPDEAVQFLLDSRERLKS+ LGSMAE +
Subjt:  ELGDYARAASLLEDLIKEKSDDSDIFRLLGEVKYKLKDYKGSIAAYKSATMVSKDVNFEVLRGLTNALLAAGKPDEAVQFLLDSRERLKSMKLGSMAEGK

Query:  EMETKLSIDPIQVELLLGKSYSGGGHVGDAISVYDQLITMHPDDFRGYLAKGIILKENGRAGDAERMFIQVIF
        EM+TKL IDP+QVELLLGK+YS  GHV DA+SVYDQLIT HP+DFRGYLAKGIILKENGRAGDAERMFIQ  F
Subjt:  EMETKLSIDPIQVELLLGKSYSGGGHVGDAISVYDQLITMHPDDFRGYLAKGIILKENGRAGDAERMFIQVIF

XP_022955494.1 uncharacterized protein LOC111457503 isoform X1 [Cucurbita moschata]

1.2e-75

86.71

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Query:  ELGDYARAASLLEDLIKEKSDDSDIFRLLGEVKYKLKDYKGSIAAYKSATMVSKDVNFEVLRGLTNALLAAGKPDEAVQFLLDSRERLKSMKLGSMAEGK
        ELG YA AASLLEDLIK KSDDSDIFRLLGEVKYKLKDY GSIAAYKSAT +S+DVNFEVLRGLTNALLAAGKPDEAVQFLLDSRERLKS+ LGSMAEG+
Subjt:  ELGDYARAASLLEDLIKEKSDDSDIFRLLGEVKYKLKDYKGSIAAYKSATMVSKDVNFEVLRGLTNALLAAGKPDEAVQFLLDSRERLKSMKLGSMAEGK

Query:  EMETKLSIDPIQVELLLGKSYSGGGHVGDAISVYDQLITMHPDDFRGYLAKGIILKENGRAGDAERMFIQVIF
        EM+TKL IDP+QVELLLGK+YS  GHV DA+SVYDQLIT HP+DFRGYLAKGIILKENG AGDAERMFIQ  F
Subjt:  EMETKLSIDPIQVELLLGKSYSGGGHVGDAISVYDQLITMHPDDFRGYLAKGIILKENGRAGDAERMFIQVIF

XP_022955495.1 uncharacterized protein LOC111457503 isoform X2 [Cucurbita moschata]

1.2e-75

86.71

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Query:  ELGDYARAASLLEDLIKEKSDDSDIFRLLGEVKYKLKDYKGSIAAYKSATMVSKDVNFEVLRGLTNALLAAGKPDEAVQFLLDSRERLKSMKLGSMAEGK
        ELG YA AASLLEDLIK KSDDSDIFRLLGEVKYKLKDY GSIAAYKSAT +S+DVNFEVLRGLTNALLAAGKPDEAVQFLLDSRERLKS+ LGSMAEG+
Subjt:  ELGDYARAASLLEDLIKEKSDDSDIFRLLGEVKYKLKDYKGSIAAYKSATMVSKDVNFEVLRGLTNALLAAGKPDEAVQFLLDSRERLKSMKLGSMAEGK

Query:  EMETKLSIDPIQVELLLGKSYSGGGHVGDAISVYDQLITMHPDDFRGYLAKGIILKENGRAGDAERMFIQVIF
        EM+TKL IDP+QVELLLGK+YS  GHV DA+SVYDQLIT HP+DFRGYLAKGIILKENG AGDAERMFIQ  F
Subjt:  EMETKLSIDPIQVELLLGKSYSGGGHVGDAISVYDQLITMHPDDFRGYLAKGIILKENGRAGDAERMFIQVIF

XP_023527009.1 uncharacterized protein LOC111790360 [Cucurbita pepo subsp. pepo]

1.6e-75

86.71

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Query:  ELGDYARAASLLEDLIKEKSDDSDIFRLLGEVKYKLKDYKGSIAAYKSATMVSKDVNFEVLRGLTNALLAAGKPDEAVQFLLDSRERLKSMKLGSMAEGK
        ELG YA AASLLEDLIK KSDDSDIFRLLGEVKYKLKDY GSIAAYKSAT +S+DVNFEVLRGLTNALLAAGKPDEAVQFLLDSRERLKS+ LGSMAEG+
Subjt:  ELGDYARAASLLEDLIKEKSDDSDIFRLLGEVKYKLKDYKGSIAAYKSATMVSKDVNFEVLRGLTNALLAAGKPDEAVQFLLDSRERLKSMKLGSMAEGK

Query:  EMETKLSIDPIQVELLLGKSYSGGGHVGDAISVYDQLITMHPDDFRGYLAKGIILKENGRAGDAERMFIQVIF
        EM+TKL IDP+QVELLLGK+YS  GHV DA+SVYDQLIT HP+DFRGYLAKGIILKENG AGDAERMFIQ  F
Subjt:  EMETKLSIDPIQVELLLGKSYSGGGHVGDAISVYDQLITMHPDDFRGYLAKGIILKENGRAGDAERMFIQVIF

XP_038881142.1 uncharacterized protein LOC120072738 [Benincasa hispida]

1.4e-79

90.75

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Query:  ELGDYARAASLLEDLIKEKSDDSDIFRLLGEVKYKLKDYKGSIAAYKSATMVSKDVNFEVLRGLTNALLAAGKPDEAVQFLLDSRERLKSMKLGSMAEGK
        ELG+YARAASLLEDLIKEK DDSDIFRLLGEVKYKLKDY GS+AAYKSATM+S+DVNFEVLRGLTNALLAAGK DEAVQFLLD RERLKS+KLGSMAEGK
Subjt:  ELGDYARAASLLEDLIKEKSDDSDIFRLLGEVKYKLKDYKGSIAAYKSATMVSKDVNFEVLRGLTNALLAAGKPDEAVQFLLDSRERLKSMKLGSMAEGK

Query:  EMETKLSIDPIQVELLLGKSYSGGGHVGDAISVYDQLITMHPDDFRGYLAKGIILKENGRAGDAERMFIQVIF
        EMETKLSIDPIQVELLLGKSYS  GHVGDAISVYDQLI+ HPDDFRGYLAKGIILKENGR+GDAERMFIQ  F
Subjt:  EMETKLSIDPIQVELLLGKSYSGGGHVGDAISVYDQLITMHPDDFRGYLAKGIILKENGRAGDAERMFIQVIF

TrEMBL top hits

e value

%identity

Alignment

A0A1S3CN41 uncharacterized protein LOC103502794

5.5e-74

84.39

Show/hide

Query:  ELGDYARAASLLEDLIKEKSDDSDIFRLLGEVKYKLKDYKGSIAAYKSATMVSKDVNFEVLRGLTNALLAAGKPDEAVQFLLDSRERLKSMKLGSMAEGK
        ELG+YA+AASLLEDLIKEKSDDSDIFRLLGEVKYKLKDY GS+AAYKSAT +S+DVNFEVLRGLTN+LLAAGKPDE+VQFLLD RE LKS+KLG   EGK
Subjt:  ELGDYARAASLLEDLIKEKSDDSDIFRLLGEVKYKLKDYKGSIAAYKSATMVSKDVNFEVLRGLTNALLAAGKPDEAVQFLLDSRERLKSMKLGSMAEGK

Query:  EMETKLSIDPIQVELLLGKSYSGGGHVGDAISVYDQLITMHPDDFRGYLAKGIILKENGRAGDAERMFIQVIF
        EMETKLSIDP+QV+LLLGKSYS  GHV DA+SVYDQLI+ HP+DFRGYLAKGIILKENGR+GDAERMFIQ  F
Subjt:  EMETKLSIDPIQVELLLGKSYSGGGHVGDAISVYDQLITMHPDDFRGYLAKGIILKENGRAGDAERMFIQVIF

A0A6J1GV96 uncharacterized protein LOC111457503 isoform X2

5.8e-76

86.71

Show/hide

Query:  ELGDYARAASLLEDLIKEKSDDSDIFRLLGEVKYKLKDYKGSIAAYKSATMVSKDVNFEVLRGLTNALLAAGKPDEAVQFLLDSRERLKSMKLGSMAEGK
        ELG YA AASLLEDLIK KSDDSDIFRLLGEVKYKLKDY GSIAAYKSAT +S+DVNFEVLRGLTNALLAAGKPDEAVQFLLDSRERLKS+ LGSMAEG+
Subjt:  ELGDYARAASLLEDLIKEKSDDSDIFRLLGEVKYKLKDYKGSIAAYKSATMVSKDVNFEVLRGLTNALLAAGKPDEAVQFLLDSRERLKSMKLGSMAEGK

Query:  EMETKLSIDPIQVELLLGKSYSGGGHVGDAISVYDQLITMHPDDFRGYLAKGIILKENGRAGDAERMFIQVIF
        EM+TKL IDP+QVELLLGK+YS  GHV DA+SVYDQLIT HP+DFRGYLAKGIILKENG AGDAERMFIQ  F
Subjt:  EMETKLSIDPIQVELLLGKSYSGGGHVGDAISVYDQLITMHPDDFRGYLAKGIILKENGRAGDAERMFIQVIF

A0A6J1GWF7 uncharacterized protein LOC111457503 isoform X1

5.8e-76

86.71

Show/hide

Query:  ELGDYARAASLLEDLIKEKSDDSDIFRLLGEVKYKLKDYKGSIAAYKSATMVSKDVNFEVLRGLTNALLAAGKPDEAVQFLLDSRERLKSMKLGSMAEGK
        ELG YA AASLLEDLIK KSDDSDIFRLLGEVKYKLKDY GSIAAYKSAT +S+DVNFEVLRGLTNALLAAGKPDEAVQFLLDSRERLKS+ LGSMAEG+
Subjt:  ELGDYARAASLLEDLIKEKSDDSDIFRLLGEVKYKLKDYKGSIAAYKSATMVSKDVNFEVLRGLTNALLAAGKPDEAVQFLLDSRERLKSMKLGSMAEGK

Query:  EMETKLSIDPIQVELLLGKSYSGGGHVGDAISVYDQLITMHPDDFRGYLAKGIILKENGRAGDAERMFIQVIF
        EM+TKL IDP+QVELLLGK+YS  GHV DA+SVYDQLIT HP+DFRGYLAKGIILKENG AGDAERMFIQ  F
Subjt:  EMETKLSIDPIQVELLLGKSYSGGGHVGDAISVYDQLITMHPDDFRGYLAKGIILKENGRAGDAERMFIQVIF

A0A6J1IX11 uncharacterized protein LOC111479948 isoform X2

1.7e-75

86.13

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Query:  ELGDYARAASLLEDLIKEKSDDSDIFRLLGEVKYKLKDYKGSIAAYKSATMVSKDVNFEVLRGLTNALLAAGKPDEAVQFLLDSRERLKSMKLGSMAEGK
        ELG YA AASLLEDLIK KSDDSDIFRLLGEVKYKLKDY GSIAAYKSAT +S+DVNFEVLRGLTNALLAAGKPDEAVQFLLDSRERLKS+ LGSMAEG+
Subjt:  ELGDYARAASLLEDLIKEKSDDSDIFRLLGEVKYKLKDYKGSIAAYKSATMVSKDVNFEVLRGLTNALLAAGKPDEAVQFLLDSRERLKSMKLGSMAEGK

Query:  EMETKLSIDPIQVELLLGKSYSGGGHVGDAISVYDQLITMHPDDFRGYLAKGIILKENGRAGDAERMFIQVIF
        +M+TKL IDP+QVELLLGK+YS  GHV DA+SVYDQLIT HP+DFRGYLAKGIILKENG AGDAERMFIQ  F
Subjt:  EMETKLSIDPIQVELLLGKSYSGGGHVGDAISVYDQLITMHPDDFRGYLAKGIILKENGRAGDAERMFIQVIF

A0A6J1IZV0 uncharacterized protein LOC111479948 isoform X1

1.7e-75

86.13

Show/hide

Query:  ELGDYARAASLLEDLIKEKSDDSDIFRLLGEVKYKLKDYKGSIAAYKSATMVSKDVNFEVLRGLTNALLAAGKPDEAVQFLLDSRERLKSMKLGSMAEGK
        ELG YA AASLLEDLIK KSDDSDIFRLLGEVKYKLKDY GSIAAYKSAT +S+DVNFEVLRGLTNALLAAGKPDEAVQFLLDSRERLKS+ LGSMAEG+
Subjt:  ELGDYARAASLLEDLIKEKSDDSDIFRLLGEVKYKLKDYKGSIAAYKSATMVSKDVNFEVLRGLTNALLAAGKPDEAVQFLLDSRERLKSMKLGSMAEGK

Query:  EMETKLSIDPIQVELLLGKSYSGGGHVGDAISVYDQLITMHPDDFRGYLAKGIILKENGRAGDAERMFIQVIF
        +M+TKL IDP+QVELLLGK+YS  GHV DA+SVYDQLIT HP+DFRGYLAKGIILKENG AGDAERMFIQ  F
Subjt:  EMETKLSIDPIQVELLLGKSYSGGGHVGDAISVYDQLITMHPDDFRGYLAKGIILKENGRAGDAERMFIQVIF

SwissProt top hits

e value

%identity

Alignment

Q58741 TPR repeat-containing protein MJ1345

3.4e-04

24.28

Show/hide

Query:  ELGDYARAASLLEDLIKEKSDDSDIFRLLGEVKYKLKDYKGSIAAYKSATMVS-KDVNFEVLRGLTNALLAAGKPDEAVQFLLDSRERLKSMKLGSMAEG
        +LG+Y  A  +++ ++K+    +  +   GE+ Y+    K S+  + +A  ++ KD    + +G    L   G+  EA++ L    ER            
Subjt:  ELGDYARAASLLEDLIKEKSDDSDIFRLLGEVKYKLKDYKGSIAAYKSATMVS-KDVNFEVLRGLTNALLAAGKPDEAVQFLLDSRERLKSMKLGSMAEG

Query:  KEMETKLSIDPIQVELLLGKSYSGGGHVGDAISVYDQLITMHPDDFRGYLAKGIILKENGRAGDAERMFIQVI
        K++   + I  IQ+ + LG+       +  A+    + + ++PDD   YL KGIIL + G+  +A + F +V+
Subjt:  KEMETKLSIDPIQVELLLGKSYSGGGHVGDAISVYDQLITMHPDDFRGYLAKGIILKENGRAGDAERMFIQVI

Arabidopsis top hits

e value

%identity

Alignment

AT1G78915.1 Tetratricopeptide repeat (TPR)-like superfamily protein

4.6e-57

66.47

Show/hide

Query:  ELGDYARAASLLEDLIKEKSDDSDIFRLLGEVKYKLKDYKGSIAAYKSATMVSKDVNFEVLRGLTNALLAAGKPDEAVQFLLDSRERLKSMKLGSMAEGK
        ELGDY+RAA+ LE L KE+  D D+FRLLGEV Y+L +Y+GSIAAYK +  VSK ++ EV RGL NA LAA KPDEAV+FLLD+RERL + K  S  +  
Subjt:  ELGDYARAASLLEDLIKEKSDDSDIFRLLGEVKYKLKDYKGSIAAYKSATMVSKDVNFEVLRGLTNALLAAGKPDEAVQFLLDSRERLKSMKLGSMAEGK

Query:  EMETKLSIDPIQVELLLGKSYSGGGHVGDAISVYDQLITMHPDDFRGYLAKGIILKENGRAGDAERMFIQVIF
          ET L  DPIQVELLLGK+YS  GH+ DAI+VYDQLI+ HP+DFRGYLAKGIIL+ENG  GDAERMFIQ  F
Subjt:  EMETKLSIDPIQVELLLGKSYSGGGHVGDAISVYDQLITMHPDDFRGYLAKGIILKENGRAGDAERMFIQVIF

AT1G78915.2 Tetratricopeptide repeat (TPR)-like superfamily protein

4.6e-57

66.47

Show/hide

Query:  ELGDYARAASLLEDLIKEKSDDSDIFRLLGEVKYKLKDYKGSIAAYKSATMVSKDVNFEVLRGLTNALLAAGKPDEAVQFLLDSRERLKSMKLGSMAEGK
        ELGDY+RAA+ LE L KE+  D D+FRLLGEV Y+L +Y+GSIAAYK +  VSK ++ EV RGL NA LAA KPDEAV+FLLD+RERL + K  S  +  
Subjt:  ELGDYARAASLLEDLIKEKSDDSDIFRLLGEVKYKLKDYKGSIAAYKSATMVSKDVNFEVLRGLTNALLAAGKPDEAVQFLLDSRERLKSMKLGSMAEGK

Query:  EMETKLSIDPIQVELLLGKSYSGGGHVGDAISVYDQLITMHPDDFRGYLAKGIILKENGRAGDAERMFIQVIF
          ET L  DPIQVELLLGK+YS  GH+ DAI+VYDQLI+ HP+DFRGYLAKGIIL+ENG  GDAERMFIQ  F
Subjt:  EMETKLSIDPIQVELLLGKSYSGGGHVGDAISVYDQLITMHPDDFRGYLAKGIILKENGRAGDAERMFIQVIF

AT1G78915.3 Tetratricopeptide repeat (TPR)-like superfamily protein

4.6e-57

66.47

Show/hide

Query:  ELGDYARAASLLEDLIKEKSDDSDIFRLLGEVKYKLKDYKGSIAAYKSATMVSKDVNFEVLRGLTNALLAAGKPDEAVQFLLDSRERLKSMKLGSMAEGK
        ELGDY+RAA+ LE L KE+  D D+FRLLGEV Y+L +Y+GSIAAYK +  VSK ++ EV RGL NA LAA KPDEAV+FLLD+RERL + K  S  +  
Subjt:  ELGDYARAASLLEDLIKEKSDDSDIFRLLGEVKYKLKDYKGSIAAYKSATMVSKDVNFEVLRGLTNALLAAGKPDEAVQFLLDSRERLKSMKLGSMAEGK

Query:  EMETKLSIDPIQVELLLGKSYSGGGHVGDAISVYDQLITMHPDDFRGYLAKGIILKENGRAGDAERMFIQVIF
          ET L  DPIQVELLLGK+YS  GH+ DAI+VYDQLI+ HP+DFRGYLAKGIIL+ENG  GDAERMFIQ  F
Subjt:  EMETKLSIDPIQVELLLGKSYSGGGHVGDAISVYDQLITMHPDDFRGYLAKGIILKENGRAGDAERMFIQVIF

Sequences

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CDS sequence

Show/hide CDS sequence

ATGTCTCCACATGAACGATTCAGGATCACATCGTTTGTACTTTACAAAGTGGGTCGCATCCATAGTGTCCCCAGGATAAGAATCAATTTATTACCTCAAATTGAATTAGG
TGACTATGCTCGAGCAGCCTCTTTGCTTGAAGACTTGATAAAGGAGAAGTCAGATGATTCTGACATTTTCCGCTTGCTTGGGGAAGTAAAATATAAGCTTAAAGATTATA
AGGGGAGTATTGCGGCATACAAGAGCGCCACTATGGTATCCAAAGATGTCAATTTTGAGGTTCTGCGTGGCCTTACAAATGCATTACTTGCTGCTGGGAAACCAGATGAG
GCTGTTCAATTCCTTTTGGACTCCCGTGAACGTCTTAAAAGTATGAAATTAGGAAGTATGGCTGAGGGCAAGGAGATGGAAACTAAATTATCTATAGATCCTATTCAAGT
TGAGTTACTACTCGGAAAATCCTACTCAGGCGGGGGACATGTTGGTGATGCTATATCTGTCTATGACCAACTTATCACCATGCACCCTGATGACTTCCGTGGTTACTTAG
CTAAGGGAATTATTCTAAAGGAAAATGGTAGAGCTGGAGATGCTGAGAGGATGTTCATCCAAGTCATCTTCTCCAGGGATCCACAACTTATTCAGACTTCTCAAATCGGT
TCAACATCTCTCACAATTTGTGATTTGTAG

mRNA sequence

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Protein sequence

Show/hide protein sequence

MSPHERFRITSFVLYKVGRIHSVPRIRINLLPQIELGDYARAASLLEDLIKEKSDDSDIFRLLGEVKYKLKDYKGSIAAYKSATMVSKDVNFEVLRGLTNALLAAGKPDE
AVQFLLDSRERLKSMKLGSMAEGKEMETKLSIDPIQVELLLGKSYSGGGHVGDAISVYDQLITMHPDDFRGYLAKGIILKENGRAGDAERMFIQVIFSRDPQLIQTSQIG
STSLTICDL

Tan0003528 (gene) of Snake gourd v1 genome