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Tan0003550 (gene) of Snake gourd v1 genome

Gene IDTan0003550
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionNADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial
Genome locationLG05:30088188..30096783
RNA-Seq ExpressionTan0003550
SyntenyTan0003550
Gene Ontology termsGO:0006120 - mitochondrial electron transport, NADH to ubiquinone (biological process)
GO:0005747 - mitochondrial respiratory chain complex I (cellular component)
InterPro domainsIPR019401 - Zinc finger, CHCC-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022148513.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial [Momordica charantia]2.8e-4891.26Show/hide
Query:  MASSLFKAFVESSSKFPSSVRNLSLVSNQISPHTAKWMQDTSKKSPMELINEVPPIKVKGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD
        MAS+LFK  +ESSSKFPSS RNLSLVSNQI  HTAKWMQDTSKKSPMELINEVPPIKV+GRI+ACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD
Subjt:  MASSLFKAFVESSSKFPSSVRNLSLVSNQISPHTAKWMQDTSKKSPMELINEVPPIKVKGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD

Query:  HHH
        HHH
Subjt:  HHH
XP_022943963.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial [Cucurbita moschata]1.4e-4792.23Show/hide
Query:  MASSLFKAFVESSSKFPSSVRNLSLVSNQISPHTAKWMQDTSKKSPMELINEVPPIKVKGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD
        MASSLFKA VESSSK PSS R+LSLVSNQI  HTAKWMQDTSKKSPMELINEVPPIKV+GRIVACEGDSNP LGHPIEFICLDREEPAVCKYCGLRYTQD
Subjt:  MASSLFKAFVESSSKFPSSVRNLSLVSNQISPHTAKWMQDTSKKSPMELINEVPPIKVKGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD

Query:  HHH
        HHH
Subjt:  HHH
XP_022986645.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial [Cucurbita maxima]8.2e-4893.2Show/hide
Query:  MASSLFKAFVESSSKFPSSVRNLSLVSNQISPHTAKWMQDTSKKSPMELINEVPPIKVKGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD
        MASSLFKA VESSSK PSS R+LSLVSNQI  HTAKWMQDTSKKSPMELINEVPPIKV+GRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD
Subjt:  MASSLFKAFVESSSKFPSSVRNLSLVSNQISPHTAKWMQDTSKKSPMELINEVPPIKVKGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD

Query:  HHH
        HHH
Subjt:  HHH
XP_023511819.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial-like [Cucurbita pepo subsp. pepo]4.8e-4893.2Show/hide
Query:  MASSLFKAFVESSSKFPSSVRNLSLVSNQISPHTAKWMQDTSKKSPMELINEVPPIKVKGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD
        MASSLFKA VESSSK PSS R+LSLVSNQI  HTAKWMQDTSKKSPMELINEVPPIKV+GRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD
Subjt:  MASSLFKAFVESSSKFPSSVRNLSLVSNQISPHTAKWMQDTSKKSPMELINEVPPIKVKGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD

Query:  HHH
        HHH
Subjt:  HHH
XP_038900460.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial [Benincasa hispida]6.2e-4892.23Show/hide
Query:  MASSLFKAFVESSSKFPSSVRNLSLVSNQISPHTAKWMQDTSKKSPMELINEVPPIKVKGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD
        MASSLFKA VESSSK PSS RNLSLV+NQI  HTAKWMQDTSKKSPMELINEVPPIKV+GRIVACEGD+NPALGHPIEFICLDREEPAVCKYCGLRYTQD
Subjt:  MASSLFKAFVESSSKFPSSVRNLSLVSNQISPHTAKWMQDTSKKSPMELINEVPPIKVKGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD

Query:  HHH
        HHH
Subjt:  HHH
TrEMBL top hitse value%identityAlignment
A0A0A0LNG2 zf-CHCC domain-containing protein3.7e-4689.32Show/hide
Query:  MASSLFKAFVESSSKFPSSVRNLSLVSNQISPHTAKWMQDTSKKSPMELINEVPPIKVKGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD
        MASSLFK  +ESSS  PSS RNLSLV+NQI  HTAKWMQDTSKKSPMELINEVPPIKV GRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQ 
Subjt:  MASSLFKAFVESSSKFPSSVRNLSLVSNQISPHTAKWMQDTSKKSPMELINEVPPIKVKGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD

Query:  HHH
        HHH
Subjt:  HHH
A0A1S3CI88 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial4.4e-4790.29Show/hide
Query:  MASSLFKAFVESSSKFPSSVRNLSLVSNQISPHTAKWMQDTSKKSPMELINEVPPIKVKGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD
        MASSLFK  +ESSS  PSS RNLSLV+NQI  HTAKWMQDTSKKSPMELINEVPPIKV+GRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD
Subjt:  MASSLFKAFVESSSKFPSSVRNLSLVSNQISPHTAKWMQDTSKKSPMELINEVPPIKVKGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD

Query:  HHH
        HHH
Subjt:  HHH
A0A6J1D4A8 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial1.4e-4891.26Show/hide
Query:  MASSLFKAFVESSSKFPSSVRNLSLVSNQISPHTAKWMQDTSKKSPMELINEVPPIKVKGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD
        MAS+LFK  +ESSSKFPSS RNLSLVSNQI  HTAKWMQDTSKKSPMELINEVPPIKV+GRI+ACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD
Subjt:  MASSLFKAFVESSSKFPSSVRNLSLVSNQISPHTAKWMQDTSKKSPMELINEVPPIKVKGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD

Query:  HHH
        HHH
Subjt:  HHH
A0A6J1FXJ3 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial6.7e-4892.23Show/hide
Query:  MASSLFKAFVESSSKFPSSVRNLSLVSNQISPHTAKWMQDTSKKSPMELINEVPPIKVKGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD
        MASSLFKA VESSSK PSS R+LSLVSNQI  HTAKWMQDTSKKSPMELINEVPPIKV+GRIVACEGDSNP LGHPIEFICLDREEPAVCKYCGLRYTQD
Subjt:  MASSLFKAFVESSSKFPSSVRNLSLVSNQISPHTAKWMQDTSKKSPMELINEVPPIKVKGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD

Query:  HHH
        HHH
Subjt:  HHH
A0A6J1JEL4 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial3.9e-4893.2Show/hide
Query:  MASSLFKAFVESSSKFPSSVRNLSLVSNQISPHTAKWMQDTSKKSPMELINEVPPIKVKGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD
        MASSLFKA VESSSK PSS R+LSLVSNQI  HTAKWMQDTSKKSPMELINEVPPIKV+GRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD
Subjt:  MASSLFKAFVESSSKFPSSVRNLSLVSNQISPHTAKWMQDTSKKSPMELINEVPPIKVKGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD

Query:  HHH
        HHH
Subjt:  HHH
SwissProt top hitse value%identityAlignment
Q5AUI1 Lactobacillus shifted protein3.3e-0746.43Show/hide
Query:  MELINEVPPIKVKGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQDHH
        +ELI++ P   VK +IV+C+G   P LGHP  FI  D+ E   C YCGL +  +HH
Subjt:  MELINEVPPIKVKGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQDHH
Q9M9M6 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial1.4e-3769.37Show/hide
Query:  MASSLFKAFVESSSKFPSSVRNLSLVSNQ--------ISPHTAKWMQDTSKKSPMELINEVPPIKVKGRIVACEGDSNPALGHPIEFICLDREEPAVCKY
        MAS+L KA + S    PSS RN S+ + Q        +  HTAKWMQD SKKSPMELI+EVPPIKV GRIVACEGD+NPALGHPIEFICLD  EPA+CKY
Subjt:  MASSLFKAFVESSSKFPSSVRNLSLVSNQ--------ISPHTAKWMQDTSKKSPMELINEVPPIKVKGRIVACEGDSNPALGHPIEFICLDREEPAVCKY

Query:  CGLRYTQDHHH
        CGLRY QDHHH
Subjt:  CGLRYTQDHHH
Arabidopsis top hitse value%identityAlignment
AT3G03070.1 NADH-ubiquinone oxidoreductase-related9.6e-3969.37Show/hide
Query:  MASSLFKAFVESSSKFPSSVRNLSLVSNQ--------ISPHTAKWMQDTSKKSPMELINEVPPIKVKGRIVACEGDSNPALGHPIEFICLDREEPAVCKY
        MAS+L KA + S    PSS RN S+ + Q        +  HTAKWMQD SKKSPMELI+EVPPIKV GRIVACEGD+NPALGHPIEFICLD  EPA+CKY
Subjt:  MASSLFKAFVESSSKFPSSVRNLSLVSNQ--------ISPHTAKWMQDTSKKSPMELINEVPPIKVKGRIVACEGDSNPALGHPIEFICLDREEPAVCKY

Query:  CGLRYTQDHHH
        CGLRY QDHHH
Subjt:  CGLRYTQDHHH

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCGAGTCTCTTCAAAGCGTTTGTTGAATCTTCCTCCAAATTTCCATCTTCGGTTAGGAATCTCAGTCTTGTTAGCAATCAAATCAGCCCGCACACCGCTAAATG
GATGCAGGATACAAGTAAGAAATCCCCCATGGAGTTGATCAACGAGGTTCCACCAATCAAGGTCAAAGGCCGTATTGTTGCTTGTGAGGGAGACAGCAATCCTGCCCTTG
GGCATCCGATCGAGTTCATATGTCTCGATCGGGAGGAGCCTGCCGTGTGCAAGTACTGTGGCCTGCGCTATACTCAGGACCATCACCACTAG
mRNA sequenceShow/hide mRNA sequence
CAAAAGTTCCATCCAGCGTTTTTACTTTGAGCTCCCCCGGACCGTAGCTCTCCGTCGCGCTCTCTTTCTCCATCTCAGGCTGTGCGTTCGGTCGGTGGATCGATGGCGTC
GAGTCTCTTCAAAGCGTTTGTTGAATCTTCCTCCAAATTTCCATCTTCGGTTAGGAATCTCAGTCTTGTTAGCAATCAAATCAGCCCGCACACCGCTAAATGGATGCAGG
ATACAAGTAAGAAATCCCCCATGGAGTTGATCAACGAGGTTCCACCAATCAAGGTCAAAGGCCGTATTGTTGCTTGTGAGGGAGACAGCAATCCTGCCCTTGGGCATCCG
ATCGAGTTCATATGTCTCGATCGGGAGGAGCCTGCCGTGTGCAAGTACTGTGGCCTGCGCTATACTCAGGACCATCACCACTAGAAAATCTTCAAGTGATCATTTCAGCC
AGCAACCCTAAACTTGGAAAGACAATGCCCTACCTTTCCAAACTTGACTTCTGTAATGCAATGACTGTAATGGGAATTTGTGAACTCCCCTCACTCACTTATGGCCGGGT
CCATTGTCTTTGCCAAATTTGTTTCATTGCTCAAAAGGATTTGTTTAATGACCTATCTTGCCGTCTCAAATACCAATAAAAGGTTTTTGATATCTTGGAGTTGCAAGCTT
GAAACGAATACTTTTTAATTCTTACCCACAGTATAATAGTAATCCTATTAATCTCTATATATATAGATATAGATTTTTTTGTTCAACGACATGTTGAGGGAGGGAGA
Protein sequenceShow/hide protein sequence
MASSLFKAFVESSSKFPSSVRNLSLVSNQISPHTAKWMQDTSKKSPMELINEVPPIKVKGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH