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Tan0003555 (gene) of Snake gourd v1 genome

Gene IDTan0003555
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionCCHC-type domain-containing protein
Genome locationLG01:28776379..28777250
RNA-Seq ExpressionTan0003555
SyntenyTan0003555
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG51519.1 hypothetical protein EZV62_024043 [Acer yangbiense]3.0e-1630.56Show/hide
Query:  EAADKNLQNATICKVLSSNLIIGDIFKTIMPRIWNLEGKVSMQNRGTNTFFCHFSNTKDKKKITEGGLWTFDKAFMLFDEPRGSYRGFEWEFKYANFWVH
        EA  + L N+ + KVLS  ++  D FK +M +IW     V ++    N F   F NT+DKK+I  GG W F+ A ++ +EPRG       +F  A FWV 
Subjt:  EAADKNLQNATICKVLSSNLIIGDIFKTIMPRIWNLEGKVSMQNRGTNTFFCHFSNTKDKKKITEGGLWTFDKAFMLFDEPRGSYRGFEWEFKYANFWVH

Query:  LHNLPLICFCRKWAKVLGTRLENLSK---------------------SNLTIKGSAKGHVFRDCDHYHQDSE---EDFMF
        +HN PLIC   +  + LG  +  +                        N   +    GH  +DC    ++ E   E+F+F
Subjt:  LHNLPLICFCRKWAKVLGTRLENLSK---------------------SNLTIKGSAKGHVFRDCDHYHQDSE---EDFMF

TXG60642.1 hypothetical protein EZV62_015215 [Acer yangbiense]2.3e-1628.32Show/hide
Query:  MEVEAFSKQIENLKLTENE-KAKVIDIGDEDLEAADKNLQNATICKVLSSNLIIGDIFKTIMPRIWNLEGKVSMQNRGTNTFFCHFSNTKDKKKITEGGL
        M  +   K  + L + E +  A+ +D+  + +  ++  L  + + KVL   LI  ++F ++M +IW + G V ++    N F  +FSN +D+++I +GG 
Subjt:  MEVEAFSKQIENLKLTENE-KAKVIDIGDEDLEAADKNLQNATICKVLSSNLIIGDIFKTIMPRIWNLEGKVSMQNRGTNTFFCHFSNTKDKKKITEGGL

Query:  WTFDKAFMLFDEPRGSYRGFEWEFKYANFWVHLHNLPLICFCRKWAKVLGTRLENLSKSNLTIKGSAKGHVFR
        WTFD+A ++FD+P  +    + +F+  +FWV +HNL L+CF  +    LG+ +  +   +L  +        R
Subjt:  WTFDKAFMLFDEPRGSYRGFEWEFKYANFWVHLHNLPLICFCRKWAKVLGTRLENLSKSNLTIKGSAKGHVFR

TXG62563.1 hypothetical protein EZV62_009557 [Acer yangbiense]5.4e-1831.79Show/hide
Query:  LKLTENEKAKV---IDIGDE-------DLEAADKNLQNATIC---KVLSSNLIIGDIFKTIMPRIWNLEGKVSMQNRGTNTFFCHFSNTKDKKKITEGGL
        + ++ENE A +   + IG++       D++  DK  Q   +C   KVL+S ++  + FK +M RIW++ G V ++    N F CHF+N + +K+I  GG 
Subjt:  LKLTENEKAKV---IDIGDE-------DLEAADKNLQNATIC---KVLSSNLIIGDIFKTIMPRIWNLEGKVSMQNRGTNTFFCHFSNTKDKKKITEGGL

Query:  WTFDKAFMLFDEPRGSYRGFEWEFKYANFWVHLHNLPLICFCRKWAKVLGTRLENLSKSNLTIKGSAKGHVFR
        W FD+A ++F+EP G+       F    FWV +HNL L+C   +    LG  +  +   +L    +  G   R
Subjt:  WTFDKAFMLFDEPRGSYRGFEWEFKYANFWVHLHNLPLICFCRKWAKVLGTRLENLSKSNLTIKGSAKGHVFR

TXG64850.1 hypothetical protein EZV62_011844 [Acer yangbiense]4.1e-1831.79Show/hide
Query:  MEVEAFSKQIENLKLTENE-KAKVIDIGDEDLEAADKNLQNATICKVLSSNLIIGDIFKTIMPRIWNLEGKVSMQNRGTNTFFCHFSNTKDKKKITEGGL
        M  E  +K  + L +TE E  A  +++   D     K L    + KVL+S L+  ++F  +M +IW + G V ++    N F  +F+N +D+ ++  GG 
Subjt:  MEVEAFSKQIENLKLTENE-KAKVIDIGDEDLEAADKNLQNATICKVLSSNLIIGDIFKTIMPRIWNLEGKVSMQNRGTNTFFCHFSNTKDKKKITEGGL

Query:  WTFDKAFMLFDEPRGSYRGFEWEFKYANFWVHLHNLPLICFCRKWAKVLGTRLENLSKSNLTIKGSAKGHVFR
        W+FD+A ++FDEP G+       F Y +FWV +HNLPL+C   +    LG+ +  +   +  I   A G   R
Subjt:  WTFDKAFMLFDEPRGSYRGFEWEFKYANFWVHLHNLPLICFCRKWAKVLGTRLENLSKSNLTIKGSAKGHVFR

XP_022143536.1 uncharacterized protein LOC111013413 [Momordica charantia]4.6e-1739.02Show/hide
Query:  MEVEAFSKQIENLKLTENEKAKVIDIGDEDLEAADKNLQNATICKVLSSNLIIGDIFKTIMPRIWNLEGKVSMQNRGTNTFFCHFSNTKDKKKITEGGLW
        M  E  S+Q+E LKLT+ EK ++ D+G++++E  DK  Q + +CK+L+   I G++FK +MPRIW +   V +++ G N F C F   +DK KI   G  
Subjt:  MEVEAFSKQIENLKLTENEKAKVIDIGDEDLEAADKNLQNATICKVLSSNLIIGDIFKTIMPRIWNLEGKVSMQNRGTNTFFCHFSNTKDKKKITEGGLW

Query:  TFDKAFMLFDEPRGSYRGFEWEF
         FDK+ ++ +EPR +    E E+
Subjt:  TFDKAFMLFDEPRGSYRGFEWEF

TrEMBL top hitse value%identityAlignment
A0A5C7H473 CCHC-type domain-containing protein1.4e-1630.56Show/hide
Query:  EAADKNLQNATICKVLSSNLIIGDIFKTIMPRIWNLEGKVSMQNRGTNTFFCHFSNTKDKKKITEGGLWTFDKAFMLFDEPRGSYRGFEWEFKYANFWVH
        EA  + L N+ + KVLS  ++  D FK +M +IW     V ++    N F   F NT+DKK+I  GG W F+ A ++ +EPRG       +F  A FWV 
Subjt:  EAADKNLQNATICKVLSSNLIIGDIFKTIMPRIWNLEGKVSMQNRGTNTFFCHFSNTKDKKKITEGGLWTFDKAFMLFDEPRGSYRGFEWEFKYANFWVH

Query:  LHNLPLICFCRKWAKVLGTRLENLSK---------------------SNLTIKGSAKGHVFRDCDHYHQDSE---EDFMF
        +HN PLIC   +  + LG  +  +                        N   +    GH  +DC    ++ E   E+F+F
Subjt:  LHNLPLICFCRKWAKVLGTRLENLSK---------------------SNLTIKGSAKGHVFRDCDHYHQDSE---EDFMF

A0A5C7HWV8 Uncharacterized protein1.1e-1628.32Show/hide
Query:  MEVEAFSKQIENLKLTENE-KAKVIDIGDEDLEAADKNLQNATICKVLSSNLIIGDIFKTIMPRIWNLEGKVSMQNRGTNTFFCHFSNTKDKKKITEGGL
        M  +   K  + L + E +  A+ +D+  + +  ++  L  + + KVL   LI  ++F ++M +IW + G V ++    N F  +FSN +D+++I +GG 
Subjt:  MEVEAFSKQIENLKLTENE-KAKVIDIGDEDLEAADKNLQNATICKVLSSNLIIGDIFKTIMPRIWNLEGKVSMQNRGTNTFFCHFSNTKDKKKITEGGL

Query:  WTFDKAFMLFDEPRGSYRGFEWEFKYANFWVHLHNLPLICFCRKWAKVLGTRLENLSKSNLTIKGSAKGHVFR
        WTFD+A ++FD+P  +    + +F+  +FWV +HNL L+CF  +    LG+ +  +   +L  +        R
Subjt:  WTFDKAFMLFDEPRGSYRGFEWEFKYANFWVHLHNLPLICFCRKWAKVLGTRLENLSKSNLTIKGSAKGHVFR

A0A5C7HZD3 CCHC-type domain-containing protein2.6e-1831.79Show/hide
Query:  LKLTENEKAKV---IDIGDE-------DLEAADKNLQNATIC---KVLSSNLIIGDIFKTIMPRIWNLEGKVSMQNRGTNTFFCHFSNTKDKKKITEGGL
        + ++ENE A +   + IG++       D++  DK  Q   +C   KVL+S ++  + FK +M RIW++ G V ++    N F CHF+N + +K+I  GG 
Subjt:  LKLTENEKAKV---IDIGDE-------DLEAADKNLQNATIC---KVLSSNLIIGDIFKTIMPRIWNLEGKVSMQNRGTNTFFCHFSNTKDKKKITEGGL

Query:  WTFDKAFMLFDEPRGSYRGFEWEFKYANFWVHLHNLPLICFCRKWAKVLGTRLENLSKSNLTIKGSAKGHVFR
        W FD+A ++F+EP G+       F    FWV +HNL L+C   +    LG  +  +   +L    +  G   R
Subjt:  WTFDKAFMLFDEPRGSYRGFEWEFKYANFWVHLHNLPLICFCRKWAKVLGTRLENLSKSNLTIKGSAKGHVFR

A0A5C7I6E5 CCHC-type domain-containing protein2.0e-1831.79Show/hide
Query:  MEVEAFSKQIENLKLTENE-KAKVIDIGDEDLEAADKNLQNATICKVLSSNLIIGDIFKTIMPRIWNLEGKVSMQNRGTNTFFCHFSNTKDKKKITEGGL
        M  E  +K  + L +TE E  A  +++   D     K L    + KVL+S L+  ++F  +M +IW + G V ++    N F  +F+N +D+ ++  GG 
Subjt:  MEVEAFSKQIENLKLTENE-KAKVIDIGDEDLEAADKNLQNATICKVLSSNLIIGDIFKTIMPRIWNLEGKVSMQNRGTNTFFCHFSNTKDKKKITEGGL

Query:  WTFDKAFMLFDEPRGSYRGFEWEFKYANFWVHLHNLPLICFCRKWAKVLGTRLENLSKSNLTIKGSAKGHVFR
        W+FD+A ++FDEP G+       F Y +FWV +HNLPL+C   +    LG+ +  +   +  I   A G   R
Subjt:  WTFDKAFMLFDEPRGSYRGFEWEFKYANFWVHLHNLPLICFCRKWAKVLGTRLENLSKSNLTIKGSAKGHVFR

A0A6J1CQJ5 uncharacterized protein LOC1110134132.2e-1739.02Show/hide
Query:  MEVEAFSKQIENLKLTENEKAKVIDIGDEDLEAADKNLQNATICKVLSSNLIIGDIFKTIMPRIWNLEGKVSMQNRGTNTFFCHFSNTKDKKKITEGGLW
        M  E  S+Q+E LKLT+ EK ++ D+G++++E  DK  Q + +CK+L+   I G++FK +MPRIW +   V +++ G N F C F   +DK KI   G  
Subjt:  MEVEAFSKQIENLKLTENEKAKVIDIGDEDLEAADKNLQNATICKVLSSNLIIGDIFKTIMPRIWNLEGKVSMQNRGTNTFFCHFSNTKDKKKITEGGLW

Query:  TFDKAFMLFDEPRGSYRGFEWEF
         FDK+ ++ +EPR +    E E+
Subjt:  TFDKAFMLFDEPRGSYRGFEWEF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGTGGAAGCTTTCAGCAAGCAGATAGAAAACTTAAAGCTTACAGAAAATGAAAAGGCCAAAGTTATAGATATAGGAGATGAAGATCTGGAAGCTGCTGACAAAAA
CCTTCAAAACGCTACTATATGCAAAGTCCTGTCTTCAAACCTGATCATAGGAGATATCTTCAAAACTATCATGCCAAGGATTTGGAACCTAGAAGGGAAGGTGTCGATGC
AAAACAGAGGCACAAATACTTTCTTCTGCCATTTCAGCAACACAAAGGACAAGAAGAAGATAACAGAAGGAGGACTGTGGACCTTTGACAAAGCGTTCATGTTGTTCGAT
GAGCCACGAGGGAGCTATCGAGGATTCGAATGGGAATTCAAATACGCAAACTTTTGGGTTCACCTACATAACTTACCTCTGATTTGTTTTTGCAGGAAATGGGCCAAAGT
CCTTGGAACTCGATTGGAGAATTTATCGAAGTCGAATCTGACGATCAAGGGATCTGCGAAGGGACATGTTTTCAGAGACTGTGATCATTATCACCAAGATTCGGAGGAGG
ATTTCATGTTCAGCAAAAGGCTAAGGGAATCTGCCTATATTAGAGGTAAAAGCAAGGGAGGAAAGGAAAGGAAGAGGACACCTCAAGGCCTAACAGAGGAAGGGGATGTG
GAAGAGGTTCAGGCAGATCGACAGAAGCTAGAAAAGAGACCCAAGACGATGACAACGGTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGTGGAAGCTTTCAGCAAGCAGATAGAAAACTTAAAGCTTACAGAAAATGAAAAGGCCAAAGTTATAGATATAGGAGATGAAGATCTGGAAGCTGCTGACAAAAA
CCTTCAAAACGCTACTATATGCAAAGTCCTGTCTTCAAACCTGATCATAGGAGATATCTTCAAAACTATCATGCCAAGGATTTGGAACCTAGAAGGGAAGGTGTCGATGC
AAAACAGAGGCACAAATACTTTCTTCTGCCATTTCAGCAACACAAAGGACAAGAAGAAGATAACAGAAGGAGGACTGTGGACCTTTGACAAAGCGTTCATGTTGTTCGAT
GAGCCACGAGGGAGCTATCGAGGATTCGAATGGGAATTCAAATACGCAAACTTTTGGGTTCACCTACATAACTTACCTCTGATTTGTTTTTGCAGGAAATGGGCCAAAGT
CCTTGGAACTCGATTGGAGAATTTATCGAAGTCGAATCTGACGATCAAGGGATCTGCGAAGGGACATGTTTTCAGAGACTGTGATCATTATCACCAAGATTCGGAGGAGG
ATTTCATGTTCAGCAAAAGGCTAAGGGAATCTGCCTATATTAGAGGTAAAAGCAAGGGAGGAAAGGAAAGGAAGAGGACACCTCAAGGCCTAACAGAGGAAGGGGATGTG
GAAGAGGTTCAGGCAGATCGACAGAAGCTAGAAAAGAGACCCAAGACGATGACAACGGTGTGA
Protein sequenceShow/hide protein sequence
MEVEAFSKQIENLKLTENEKAKVIDIGDEDLEAADKNLQNATICKVLSSNLIIGDIFKTIMPRIWNLEGKVSMQNRGTNTFFCHFSNTKDKKKITEGGLWTFDKAFMLFD
EPRGSYRGFEWEFKYANFWVHLHNLPLICFCRKWAKVLGTRLENLSKSNLTIKGSAKGHVFRDCDHYHQDSEEDFMFSKRLRESAYIRGKSKGGKERKRTPQGLTEEGDV
EEVQADRQKLEKRPKTMTTV