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Tan0003563 (gene) of Snake gourd v1 genome

Gene IDTan0003563
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG11:43585224..43586108
RNA-Seq ExpressionTan0003563
SyntenyTan0003563
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7031430.1 hypothetical protein SDJN02_05470, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-6285.62Show/hide
Query:  MEDPNTLAADCIVVCCCCECLALQIVLLLLLKLPWKLVRKTREFAKRRLRQREKEEKMVERVMSGSKDELRGISNGRCMRNEGDGLGLSCCMEEIEKVME
        MEDPN LAADCI +CCCCECLALQI LLLLLKLPWKL+RKTREFAKRRLRQR+KEEKM   VMSG KDELRG+SN RCMRNEGDGLGLSCCMEEIEKVME
Subjt:  MEDPNTLAADCIVVCCCCECLALQIVLLLLLKLPWKLVRKTREFAKRRLRQREKEEKMVERVMSGSKDELRGISNGRCMRNEGDGLGLSCCMEEIEKVME

Query:  DLQEKGEFGFGSFWGKGNSISGSCRDQEQFSPTNVQFQLIQVIPST
        DLQEKGEFGFGSFWGKGNSISGSCR ++QF PT V++Q IQVIP T
Subjt:  DLQEKGEFGFGSFWGKGNSISGSCRDQEQFSPTNVQFQLIQVIPST

XP_008457185.1 PREDICTED: uncharacterized protein LOC103496924 [Cucumis melo]8.0e-5680.82Show/hide
Query:  MEDPNTLAADCIVVCCCCECLALQIVLLLLLKLPWKLVRKTREFAKRRLRQREKEEKMVERVMSGSKDELRGISNGRCMRNEGDGLGLSCCMEEIEKVME
        MED NTLAADCIV+CCCC+CLALQI+LLLLLKLP KLVRKTREFAK+RL  REKEEKMV +      +ELRGISNG CMRNE  GLGLSCCMEEIEKVM+
Subjt:  MEDPNTLAADCIVVCCCCECLALQIVLLLLLKLPWKLVRKTREFAKRRLRQREKEEKMVERVMSGSKDELRGISNGRCMRNEGDGLGLSCCMEEIEKVME

Query:  DLQEKGEFGFGSFWGKGNSISGSCRDQEQFSPTNVQFQLIQVIPST
        DL EKGEFGFGSFWG GN+ SGSCRD E FSPTNVQ+QLIQVIPST
Subjt:  DLQEKGEFGFGSFWGKGNSISGSCRDQEQFSPTNVQFQLIQVIPST

XP_011649060.1 uncharacterized protein LOC105434576 [Cucumis sativus]1.2e-5680.82Show/hide
Query:  MEDPNTLAADCIVVCCCCECLALQIVLLLLLKLPWKLVRKTREFAKRRLRQREKEEKMVERVMSGSKDELRGISNGRCMRNEGDGLGLSCCMEEIEKVME
        MED NTLAADCIV+CCCC+CLALQI+LLL LKLPWKLVRKTREFAK+RLR REKEEKMV +   G  +E+RGISNG CMRNE  GLGLSCCMEEIEKVM+
Subjt:  MEDPNTLAADCIVVCCCCECLALQIVLLLLLKLPWKLVRKTREFAKRRLRQREKEEKMVERVMSGSKDELRGISNGRCMRNEGDGLGLSCCMEEIEKVME

Query:  DLQEKGEFGFGSFWGKGNSISGSCRDQEQFSPTNVQFQLIQVIPST
        DL EKGEFGFGSFWG GN+ SGSCRD + FSPTNVQ+QLIQVIPST
Subjt:  DLQEKGEFGFGSFWGKGNSISGSCRDQEQFSPTNVQFQLIQVIPST

XP_022928895.1 uncharacterized protein LOC111435666 [Cucurbita moschata]4.7e-5679.59Show/hide
Query:  MEDPNTLAADCIVVCCCCECLALQIVLLLLLKLPWKLVRKTREFAKRRLRQREKEEKMVERVMSGSKDELRGISNGRCMRNEGDGLGLSCCMEEIEKVME
        MED NTLAADCIV+CCCC+CLAL I+LLLLLKLP KLVRKTR+FAKRRLR REKEEKMV       +DE+RGISNG CMR+E DGLGLSCCMEEIE+VM+
Subjt:  MEDPNTLAADCIVVCCCCECLALQIVLLLLLKLPWKLVRKTREFAKRRLRQREKEEKMVERVMSGSKDELRGISNGRCMRNEGDGLGLSCCMEEIEKVME

Query:  DLQEKGEFGFGSFWG-KGNSISGSCRDQEQFSPTNVQFQLIQVIPST
        DL EKGEFGFGSFWG KGNS+SGSCRD+E F PT+VQ+QLIQVIPST
Subjt:  DLQEKGEFGFGSFWG-KGNSISGSCRDQEQFSPTNVQFQLIQVIPST

XP_038874336.1 uncharacterized protein LOC120067034 [Benincasa hispida]1.0e-5882.99Show/hide
Query:  MEDPNTLAADCIVVCCCCECLALQIVLLLLLKLPWKLVRKTREFAKRRLRQREKEEKMVERVM-SGSKDELRGISNGRCMRNEGDGLGLSCCMEEIEKVM
        MED NTLAADCIV+CCCC+CLALQIVLLLLLKLPWKLVRKTREFAKRRLR REKEEKMV +   S  +D+L+GISNGRCMR+E +GLGLS CMEEIEKVM
Subjt:  MEDPNTLAADCIVVCCCCECLALQIVLLLLLKLPWKLVRKTREFAKRRLRQREKEEKMVERVM-SGSKDELRGISNGRCMRNEGDGLGLSCCMEEIEKVM

Query:  EDLQEKGEFGFGSFWGKGNSISGSCRDQEQFSPTNVQFQLIQVIPST
        +DL EKGEFGFGSFWG GNSISGSCRD++Q+SPTNVQ+QLIQVIPST
Subjt:  EDLQEKGEFGFGSFWGKGNSISGSCRDQEQFSPTNVQFQLIQVIPST

TrEMBL top hitse value%identityAlignment
A0A0A0LKX5 Uncharacterized protein6.0e-5780.82Show/hide
Query:  MEDPNTLAADCIVVCCCCECLALQIVLLLLLKLPWKLVRKTREFAKRRLRQREKEEKMVERVMSGSKDELRGISNGRCMRNEGDGLGLSCCMEEIEKVME
        MED NTLAADCIV+CCCC+CLALQI+LLL LKLPWKLVRKTREFAK+RLR REKEEKMV +   G  +E+RGISNG CMRNE  GLGLSCCMEEIEKVM+
Subjt:  MEDPNTLAADCIVVCCCCECLALQIVLLLLLKLPWKLVRKTREFAKRRLRQREKEEKMVERVMSGSKDELRGISNGRCMRNEGDGLGLSCCMEEIEKVME

Query:  DLQEKGEFGFGSFWGKGNSISGSCRDQEQFSPTNVQFQLIQVIPST
        DL EKGEFGFGSFWG GN+ SGSCRD + FSPTNVQ+QLIQVIPST
Subjt:  DLQEKGEFGFGSFWGKGNSISGSCRDQEQFSPTNVQFQLIQVIPST

A0A1S3C4I0 uncharacterized protein LOC1034969243.9e-5680.82Show/hide
Query:  MEDPNTLAADCIVVCCCCECLALQIVLLLLLKLPWKLVRKTREFAKRRLRQREKEEKMVERVMSGSKDELRGISNGRCMRNEGDGLGLSCCMEEIEKVME
        MED NTLAADCIV+CCCC+CLALQI+LLLLLKLP KLVRKTREFAK+RL  REKEEKMV +      +ELRGISNG CMRNE  GLGLSCCMEEIEKVM+
Subjt:  MEDPNTLAADCIVVCCCCECLALQIVLLLLLKLPWKLVRKTREFAKRRLRQREKEEKMVERVMSGSKDELRGISNGRCMRNEGDGLGLSCCMEEIEKVME

Query:  DLQEKGEFGFGSFWGKGNSISGSCRDQEQFSPTNVQFQLIQVIPST
        DL EKGEFGFGSFWG GN+ SGSCRD E FSPTNVQ+QLIQVIPST
Subjt:  DLQEKGEFGFGSFWGKGNSISGSCRDQEQFSPTNVQFQLIQVIPST

A0A5D3B961 Uncharacterized protein3.9e-5680.82Show/hide
Query:  MEDPNTLAADCIVVCCCCECLALQIVLLLLLKLPWKLVRKTREFAKRRLRQREKEEKMVERVMSGSKDELRGISNGRCMRNEGDGLGLSCCMEEIEKVME
        MED NTLAADCIV+CCCC+CLALQI+LLLLLKLP KLVRKTREFAK+RL  REKEEKMV +      +ELRGISNG CMRNE  GLGLSCCMEEIEKVM+
Subjt:  MEDPNTLAADCIVVCCCCECLALQIVLLLLLKLPWKLVRKTREFAKRRLRQREKEEKMVERVMSGSKDELRGISNGRCMRNEGDGLGLSCCMEEIEKVME

Query:  DLQEKGEFGFGSFWGKGNSISGSCRDQEQFSPTNVQFQLIQVIPST
        DL EKGEFGFGSFWG GN+ SGSCRD E FSPTNVQ+QLIQVIPST
Subjt:  DLQEKGEFGFGSFWGKGNSISGSCRDQEQFSPTNVQFQLIQVIPST

A0A6J1ESS6 uncharacterized protein LOC1114356662.3e-5679.59Show/hide
Query:  MEDPNTLAADCIVVCCCCECLALQIVLLLLLKLPWKLVRKTREFAKRRLRQREKEEKMVERVMSGSKDELRGISNGRCMRNEGDGLGLSCCMEEIEKVME
        MED NTLAADCIV+CCCC+CLAL I+LLLLLKLP KLVRKTR+FAKRRLR REKEEKMV       +DE+RGISNG CMR+E DGLGLSCCMEEIE+VM+
Subjt:  MEDPNTLAADCIVVCCCCECLALQIVLLLLLKLPWKLVRKTREFAKRRLRQREKEEKMVERVMSGSKDELRGISNGRCMRNEGDGLGLSCCMEEIEKVME

Query:  DLQEKGEFGFGSFWG-KGNSISGSCRDQEQFSPTNVQFQLIQVIPST
        DL EKGEFGFGSFWG KGNS+SGSCRD+E F PT+VQ+QLIQVIPST
Subjt:  DLQEKGEFGFGSFWG-KGNSISGSCRDQEQFSPTNVQFQLIQVIPST

A0A6J1HXD6 uncharacterized protein LOC1114689061.2e-5478.91Show/hide
Query:  MEDPNTLAADCIVVCCCCECLALQIVLLLLLKLPWKLVRKTREFAKRRLRQREKEEKMVERVMSGSKDELRGISNGRCMRNEGDGLGLSCCMEEIEKVME
        MED NTLAADCIV+CCCC+CLAL I+LLLLLKLP KLVRKTR+FAKRRLR REKEEKMV       +DE+RG SNGRCMR+E DGLGLSCCMEEIE+VM+
Subjt:  MEDPNTLAADCIVVCCCCECLALQIVLLLLLKLPWKLVRKTREFAKRRLRQREKEEKMVERVMSGSKDELRGISNGRCMRNEGDGLGLSCCMEEIEKVME

Query:  DLQEKGEFGFGSFWG-KGNSISGSCRDQEQFSPTNVQFQLIQVIPST
        DL EKGEFGFGSFWG KGNS+SGSCRD+E F+PT+VQ+QLIQV PST
Subjt:  DLQEKGEFGFGSFWG-KGNSISGSCRDQEQFSPTNVQFQLIQVIPST

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G26140.1 unknown protein6.4e-1135.34Show/hide
Query:  VTMEDPNTLAADCIVVCCCCECLALQIVLLLLLKLPWKLVRKTREFAKRRLRQREKEEKMVERVMSGSKDELRGISNGRCMRNEGDGLGLSCCMEEIEKV
        V  ED    AADC+V+ CCC+CL LQ+ + +  K+P KL +K ++F KR         K ++  M   K+E     NG       +G   S C E+I+++
Subjt:  VTMEDPNTLAADCIVVCCCCECLALQIVLLLLLKLPWKLVRKTREFAKRRLRQREKEEKMVERVMSGSKDELRGISNGRCMRNEGDGLGLSCCMEEIEKV

Query:  MEDLQEKGEFGFGSFW
        +++L     F FGSFW
Subjt:  MEDLQEKGEFGFGSFW

AT1G68700.1 unknown protein7.6e-0434.62Show/hide
Query:  REFAKRRLRQREKEEKMVERVMSGSKDELRGISNGRCMRNEGDGLGLSCCMEEIEKVMEDLQEKGEFGFGSFWGKGNS
        ++F  RRL ++++ +   E V+    D+ R          E  G  +S CME++E+++++L  KGEF FGSFW +G+S
Subjt:  REFAKRRLRQREKEEKMVERVMSGSKDELRGISNGRCMRNEGDGLGLSCCMEEIEKVMEDLQEKGEFGFGSFWGKGNS

AT3G25597.1 unknown protein6.6e-1641.03Show/hide
Query:  MEDPNTLAADCIVVCCCCECLALQIVLLLLLKLPWKLVRKTRE-FAKRRLRQREKEEKMVERVMSGSKDELRGISNGRCMRNEGDGLGLSCCMEEIEKVM
        MED N  AADC+VV CCC CL LQI + + L LP KLV+ TR+ + K  + +R K   +       ++ +         M  E +G G   C+EE+E+V+
Subjt:  MEDPNTLAADCIVVCCCCECLALQIVLLLLLKLPWKLVRKTRE-FAKRRLRQREKEEKMVERVMSGSKDELRGISNGRCMRNEGDGLGLSCCMEEIEKVM

Query:  EDLQEKGEFGFGSFWGK
        E+  + GEF FGSFWG+
Subjt:  EDLQEKGEFGFGSFWGK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTACAGAAAAAAGTTAGATTTAAAGTTAAGCAATTATTCAAAGGAAAGATCCATTTTGCTACCTTTTTTTTCATTCCCAACCACAAATCAATGATCTTTGCTTTACC
CTTTCCTAATCAAATCCATTTTCAAACACAGGGAACTATTACCTCAACAAGCAAAGCAATGTCTTCCCCCCCTTTTTTTATCATCTGCTTCTCCTCCATCCCTCCCTTCC
TTCGGCCATTTTCCGTGACCATGGAAGACCCGAACACACTAGCAGCTGACTGCATTGTCGTATGCTGTTGCTGCGAATGCCTGGCGTTGCAGATCGTTCTCCTTTTGTTA
CTCAAGCTTCCGTGGAAACTCGTTCGGAAGACGAGAGAATTTGCCAAAAGAAGGCTAAGACAGAGAGAAAAAGAGGAAAAGATGGTAGAGAGAGTAATGAGTGGTTCTAA
AGATGAGCTTAGAGGAATTAGTAATGGAAGATGCATGAGAAATGAAGGAGATGGGTTGGGTTTGAGTTGTTGTATGGAAGAGATTGAGAAGGTGATGGAGGATTTGCAGG
AGAAAGGAGAGTTTGGTTTTGGAAGCTTTTGGGGAAAGGGTAATTCAATTTCAGGTTCTTGCAGAGATCAAGAGCAATTTAGTCCTACAAATGTACAATTTCAATTAATT
CAAGTAATTCCTTCTACATGA
mRNA sequenceShow/hide mRNA sequence
GATGATCTCATGTCATGACCTAATGAATGTAAGTTGTAACCTTGTGGAGCTGATGAAGAAAAGTATCATTTTATGTGATTGTAGAATCCAAACTTTGCTTAGGATTTGGC
AGTGTTGGTCCATGAGACCCAAAAAGGAAAGGCATTTTAGTTTGCCTTGTCCTTCAACTTTAACATTCCCATCTTATCTGTCAAACCCATATGGATGCTACAGAAAAAAG
TTAGATTTAAAGTTAAGCAATTATTCAAAGGAAAGATCCATTTTGCTACCTTTTTTTTCATTCCCAACCACAAATCAATGATCTTTGCTTTACCCTTTCCTAATCAAATC
CATTTTCAAACACAGGGAACTATTACCTCAACAAGCAAAGCAATGTCTTCCCCCCCTTTTTTTATCATCTGCTTCTCCTCCATCCCTCCCTTCCTTCGGCCATTTTCCGT
GACCATGGAAGACCCGAACACACTAGCAGCTGACTGCATTGTCGTATGCTGTTGCTGCGAATGCCTGGCGTTGCAGATCGTTCTCCTTTTGTTACTCAAGCTTCCGTGGA
AACTCGTTCGGAAGACGAGAGAATTTGCCAAAAGAAGGCTAAGACAGAGAGAAAAAGAGGAAAAGATGGTAGAGAGAGTAATGAGTGGTTCTAAAGATGAGCTTAGAGGA
ATTAGTAATGGAAGATGCATGAGAAATGAAGGAGATGGGTTGGGTTTGAGTTGTTGTATGGAAGAGATTGAGAAGGTGATGGAGGATTTGCAGGAGAAAGGAGAGTTTGG
TTTTGGAAGCTTTTGGGGAAAGGGTAATTCAATTTCAGGTTCTTGCAGAGATCAAGAGCAATTTAGTCCTACAAATGTACAATTTCAATTAATTCAAGTAATTCCTTCTA
CATGA
Protein sequenceShow/hide protein sequence
MLQKKVRFKVKQLFKGKIHFATFFFIPNHKSMIFALPFPNQIHFQTQGTITSTSKAMSSPPFFIICFSSIPPFLRPFSVTMEDPNTLAADCIVVCCCCECLALQIVLLLL
LKLPWKLVRKTREFAKRRLRQREKEEKMVERVMSGSKDELRGISNGRCMRNEGDGLGLSCCMEEIEKVMEDLQEKGEFGFGSFWGKGNSISGSCRDQEQFSPTNVQFQLI
QVIPST