CuGenDBv2

Gene ID	Tan0003573
Organism	Trichosanthes anguina (Snake gourd v1)
Description	60S ribosomal protein L34
Genome location	LG03:34731245..34731642
RNA-Seq Expression	Tan0003573
Synteny	Tan0003573
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0042254 - ribosome biogenesis (biological process) GO:0022625 - cytosolic large ribosomal subunit (cellular component) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR008195 - Ribosomal protein L34Ae IPR018065 - Ribosomal protein L34e, conserved site

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6583599.1 Crooked neck-like protein 1, partial [Cucurbita argyrosperma subsp. sororia]

4.8e-43

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Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCLVTGKRIQGIPHLRPSQYKRSRLARNRRT-------------IRERIIRAFLVEEQ
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKC VTGKRIQGIPHLRP++YKRSRLARNRRT             +RERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCLVTGKRIQGIPHLRPSQYKRSRLARNRRT-------------IRERIIRAFLVEEQ

Query:  KIVKKVLKFQKAKEKLASKS
        KIVKKVLK QKAKEKLASKS
Subjt:  KIVKKVLKFQKAKEKLASKS

XP_004138165.3 60S ribosomal protein L34 [Cucumis sativus]

4.8e-43

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Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCLVTGKRIQGIPHLRPSQYKRSRLARNRRT-------------IRERIIRAFLVEEQ
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKC VTGKRIQGIPHLRP++YKRSRLARNRRT             +RERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCLVTGKRIQGIPHLRPSQYKRSRLARNRRT-------------IRERIIRAFLVEEQ

Query:  KIVKKVLKFQKAKEKLASKS
        KIVKKVLK QKAKEKLASKS
Subjt:  KIVKKVLKFQKAKEKLASKS

XP_004138175.3 60S ribosomal protein L34 [Cucumis sativus]

4.8e-43

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Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCLVTGKRIQGIPHLRPSQYKRSRLARNRRT-------------IRERIIRAFLVEEQ
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKC VTGKRIQGIPHLRP++YKRSRLARNRRT             +RERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCLVTGKRIQGIPHLRPSQYKRSRLARNRRT-------------IRERIIRAFLVEEQ

Query:  KIVKKVLKFQKAKEKLASKS
        KIVKKVLK QKAKEKLASKS
Subjt:  KIVKKVLKFQKAKEKLASKS

XP_010044743.1 60S ribosomal protein L34 [Eucalyptus grandis]

1.1e-42

84.17

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Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCLVTGKRIQGIPHLRPSQYKRSRLARNRRT-------------IRERIIRAFLVEEQ
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKC VTGKRIQGIPHLRP++YKRSRL+RNRRT             +RERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCLVTGKRIQGIPHLRPSQYKRSRLARNRRT-------------IRERIIRAFLVEEQ

Query:  KIVKKVLKFQKAKEKLASKS
        KIVKKVLK QKAKEKLASKS
Subjt:  KIVKKVLKFQKAKEKLASKS

XP_022134504.1 60S ribosomal protein L34-like [Momordica charantia]

6.3e-43

84.17

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Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCLVTGKRIQGIPHLRPSQYKRSRLARNRRT-------------IRERIIRAFLVEEQ
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKL+YQTTKKRASGPKC VTGKRIQGIPHLRP++YKRSRLARNRRT             +RERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCLVTGKRIQGIPHLRPSQYKRSRLARNRRT-------------IRERIIRAFLVEEQ

Query:  KIVKKVLKFQKAKEKLASKS
        KIVKKVLK QKAKEKLASKS
Subjt:  KIVKKVLKFQKAKEKLASKS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LK03 Uncharacterized protein

2.3e-43

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Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCLVTGKRIQGIPHLRPSQYKRSRLARNRRT-------------IRERIIRAFLVEEQ
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKC VTGKRIQGIPHLRP++YKRSRLARNRRT             +RERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCLVTGKRIQGIPHLRPSQYKRSRLARNRRT-------------IRERIIRAFLVEEQ

Query:  KIVKKVLKFQKAKEKLASKS
        KIVKKVLK QKAKEKLASKS
Subjt:  KIVKKVLKFQKAKEKLASKS

A0A1S3BV34 60S ribosomal protein L34

2.3e-43

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Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCLVTGKRIQGIPHLRPSQYKRSRLARNRRT-------------IRERIIRAFLVEEQ
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKC VTGKRIQGIPHLRP++YKRSRLARNRRT             +RERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCLVTGKRIQGIPHLRPSQYKRSRLARNRRT-------------IRERIIRAFLVEEQ

Query:  KIVKKVLKFQKAKEKLASKS
        KIVKKVLK QKAKEKLASKS
Subjt:  KIVKKVLKFQKAKEKLASKS

A0A5A7UWQ0 60S ribosomal protein L34

2.3e-43

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Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCLVTGKRIQGIPHLRPSQYKRSRLARNRRT-------------IRERIIRAFLVEEQ
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKC VTGKRIQGIPHLRP++YKRSRLARNRRT             +RERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCLVTGKRIQGIPHLRPSQYKRSRLARNRRT-------------IRERIIRAFLVEEQ

Query:  KIVKKVLKFQKAKEKLASKS
        KIVKKVLK QKAKEKLASKS
Subjt:  KIVKKVLKFQKAKEKLASKS

A0A6J1HLN7 60S ribosomal protein L34-like

2.3e-43

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Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCLVTGKRIQGIPHLRPSQYKRSRLARNRRT-------------IRERIIRAFLVEEQ
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKC VTGKRIQGIPHLRP++YKRSRLARNRRT             +RERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCLVTGKRIQGIPHLRPSQYKRSRLARNRRT-------------IRERIIRAFLVEEQ

Query:  KIVKKVLKFQKAKEKLASKS
        KIVKKVLK QKAKEKLASKS
Subjt:  KIVKKVLKFQKAKEKLASKS

A0A6J1I6I6 60S ribosomal protein L34-like

2.3e-43

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Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCLVTGKRIQGIPHLRPSQYKRSRLARNRRT-------------IRERIIRAFLVEEQ
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKC VTGKRIQGIPHLRP++YKRSRLARNRRT             +RERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCLVTGKRIQGIPHLRPSQYKRSRLARNRRT-------------IRERIIRAFLVEEQ

Query:  KIVKKVLKFQKAKEKLASKS
        KIVKKVLK QKAKEKLASKS
Subjt:  KIVKKVLKFQKAKEKLASKS

SwissProt top hits

e value

%identity

Alignment

P40590 60S ribosomal protein L34

2.2e-43

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Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCLVTGKRIQGIPHLRPSQYKRSRLARNRRT-------------IRERIIRAFLVEEQ
        MVQRLTYR+RHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKC VTGKRIQGIPHLRP++YKRSRL+RNRRT             +RERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCLVTGKRIQGIPHLRPSQYKRSRLARNRRT-------------IRERIIRAFLVEEQ

Query:  KIVKKVLKFQKAKEKLASKS
        KIVKKVLK QK KEK A+K+
Subjt:  KIVKKVLKFQKAKEKLASKS

P41098 60S ribosomal protein L34

1.2e-44

81.67

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Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCLVTGKRIQGIPHLRPSQYKRSRLARNRRT-------------IRERIIRAFLVEEQ
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKL+YQ+TKKRASGPKC VTGKRIQGIPHLRP++YKRSRL+RNRRT             +RERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCLVTGKRIQGIPHLRPSQYKRSRLARNRRT-------------IRERIIRAFLVEEQ

Query:  KIVKKVLKFQKAKEKLASKS
        KIVKKVLK QKAKEKLA+KS
Subjt:  KIVKKVLKFQKAKEKLASKS

Q42351 60S ribosomal protein L34-1

2.2e-43

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Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCLVTGKRIQGIPHLRPSQYKRSRLARNRRT-------------IRERIIRAFLVEEQ
        MVQRL YR RHSYATKSNQHR+VKTPGGKLVYQTTKKRASGPKC VTGKRIQGIPHLRPS+YKRSRL+RNRRT             +RERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCLVTGKRIQGIPHLRPSQYKRSRLARNRRT-------------IRERIIRAFLVEEQ

Query:  KIVKKVLKFQKAKEKLASKS
        KIVKKVLK QKAKEK+A K+
Subjt:  KIVKKVLKFQKAKEKLASKS

Q9FE65 60S ribosomal protein L34-2

1.9e-42

78.99

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Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCLVTGKRIQGIPHLRPSQYKRSRLARNRRT-------------IRERIIRAFLVEEQ
        MVQRL YR RHSYATKSNQHR+VKTPGGKL YQTTKKRASGPKC VTGKRIQGIPHLRP++YKRSRL+RNRRT             +RERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCLVTGKRIQGIPHLRPSQYKRSRLARNRRT-------------IRERIIRAFLVEEQ

Query:  KIVKKVLKFQKAKEKLASK
        KIVKKVLK QKAKEK+A K
Subjt:  KIVKKVLKFQKAKEKLASK

Q9LJW6 60S ribosomal protein L34-3

9.4e-42

77.5

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Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCLVTGKRIQGIPHLRPSQYKRSRLARNRRT-------------IRERIIRAFLVEEQ
        MVQRL YR RHSYATKSNQHR+VKTPGGKL YQTT KRASGPKC VTGKRIQGIPHLRP++YKRSRLARN RT             +RERI+RAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCLVTGKRIQGIPHLRPSQYKRSRLARNRRT-------------IRERIIRAFLVEEQ

Query:  KIVKKVLKFQKAKEKLASKS
        KIVKKVLK QKAKEK A KS
Subjt:  KIVKKVLKFQKAKEKLASKS

Arabidopsis top hits

e value

%identity

Alignment

AT1G26880.1 Ribosomal protein L34e superfamily protein

1.6e-44

Show/hide

Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCLVTGKRIQGIPHLRPSQYKRSRLARNRRT-------------IRERIIRAFLVEEQ
        MVQRL YR RHSYATKSNQHR+VKTPGGKLVYQTTKKRASGPKC VTGKRIQGIPHLRPS+YKRSRL+RNRRT             +RERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCLVTGKRIQGIPHLRPSQYKRSRLARNRRT-------------IRERIIRAFLVEEQ

Query:  KIVKKVLKFQKAKEKLASKS
        KIVKKVLK QKAKEK+A K+
Subjt:  KIVKKVLKFQKAKEKLASKS

AT1G26880.2 Ribosomal protein L34e superfamily protein

2.2e-33

90.54

Show/hide

Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCLVTGKRIQGIPHLRPSQYKRSRLARNRRTI
        MVQRL YR RHSYATKSNQHR+VKTPGGKLVYQTTKKRASGPKC VTGKRIQGIPHLRPS+YKRSRL+RNRRT+
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCLVTGKRIQGIPHLRPSQYKRSRLARNRRTI

AT1G69620.1 ribosomal protein L34

1.3e-43

78.99

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Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCLVTGKRIQGIPHLRPSQYKRSRLARNRRT-------------IRERIIRAFLVEEQ
        MVQRL YR RHSYATKSNQHR+VKTPGGKL YQTTKKRASGPKC VTGKRIQGIPHLRP++YKRSRL+RNRRT             +RERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCLVTGKRIQGIPHLRPSQYKRSRLARNRRT-------------IRERIIRAFLVEEQ

Query:  KIVKKVLKFQKAKEKLASK
        KIVKKVLK QKAKEK+A K
Subjt:  KIVKKVLKFQKAKEKLASK

AT3G28900.1 Ribosomal protein L34e superfamily protein

6.7e-43

77.5

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Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCLVTGKRIQGIPHLRPSQYKRSRLARNRRT-------------IRERIIRAFLVEEQ
        MVQRL YR RHSYATKSNQHR+VKTPGGKL YQTT KRASGPKC VTGKRIQGIPHLRP++YKRSRLARN RT             +RERI+RAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCLVTGKRIQGIPHLRPSQYKRSRLARNRRT-------------IRERIIRAFLVEEQ

Query:  KIVKKVLKFQKAKEKLASKS
        KIVKKVLK QKAKEK A KS
Subjt:  KIVKKVLKFQKAKEKLASKS

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGTTCAGCGTCTTACATATCGCAAGCGCCATAGCTATGCTACCAAGTCTAACCAACACCGTGTCGTCAAAACACCTGGCGGGAAGCTTGTGTACCAGACTACCAAGAA
AAGAGCTAGTGGACCAAAATGTCTAGTTACCGGCAAAAGGATTCAGGGAATTCCTCACTTGAGGCCATCTCAATATAAGAGGTCTAGACTGGCTAGGAACCGGAGGACTA
TAAGAGAAAGGATCATTCGAGCCTTTTTGGTGGAAGAGCAAAAGATTGTGAAAAAGGTATTGAAGTTTCAGAAGGCAAAAGAGAAGCTGGCATCGAAGAGCTAA

mRNA sequence

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Protein sequence

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MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCLVTGKRIQGIPHLRPSQYKRSRLARNRRTIRERIIRAFLVEEQKIVKKVLKFQKAKEKLASKS

Tan0003573 (gene) of Snake gourd v1 genome