; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0003595 (gene) of Snake gourd v1 genome

Gene IDTan0003595
OrganismTrichosanthes anguina (Snake gourd v1)
Description60S ribosomal protein L26
Genome locationLG05:46021493..46022182
RNA-Seq ExpressionTan0003595
SyntenyTan0003595
Gene Ontology termsGO:0002181 - cytoplasmic translation (biological process)
GO:0042273 - ribosomal large subunit biogenesis (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR005756 - Ribosomal protein L26/L24, eukaryotic/archaeal
IPR005824 - KOW
IPR005825 - Ribosomal protein L24/L26, conserved site
IPR008991 - Translation protein SH3-like domain superfamily
IPR014722 - Ribosomal protein L2, domain 2
IPR041988 - Ribosomal protein L26/L24, KOW domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004148028.1 60S ribosomal protein L26-1 [Cucumis sativus]3.1e-6997.26Show/hide
Query:  MKYNPRVSSSRRKNRKAHFTAPSSVRRILMSATLSADLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRVSSSRRKNRKAHF+APSSVRRILMSATLS DLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKW+IHIERITREKVNGSTVNVGI P
Subjt:  MKYNPRVSSSRRKNRKAHFTAPSSVRRILMSATLSADLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
        SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
Subjt:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD

XP_007029307.1 PREDICTED: 60S ribosomal protein L26-1 [Theobroma cacao]2.6e-6895.21Show/hide
Query:  MKYNPRVSSSRRKNRKAHFTAPSSVRRILMSATLSADLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRVSSSRRKNRKAHFTAPSSVRRILMSA LS+DLRSKYNVRSMP+RKDDEVQV+RGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
Subjt:  MKYNPRVSSSRRKNRKAHFTAPSSVRRILMSATLSADLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
        SKV+ITKL+LDKDRKSLLDRKAKGRA+ADKDKGTKFTAEDIMQSVD
Subjt:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD

XP_008457837.1 PREDICTED: 60S ribosomal protein L26-1-like [Cucumis melo]1.6e-6896.58Show/hide
Query:  MKYNPRVSSSRRKNRKAHFTAPSSVRRILMSATLSADLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRVSSSRRKNRKAHF+APSSVRRILMSA LS DLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKW+IHIERITREKVNGSTVNVGI P
Subjt:  MKYNPRVSSSRRKNRKAHFTAPSSVRRILMSATLSADLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
        SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
Subjt:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD

XP_022149443.1 60S ribosomal protein L26-1-like [Momordica charantia]1.1e-6997.95Show/hide
Query:  MKYNPRVSSSRRKNRKAHFTAPSSVRRILMSATLSADLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRVSSSRRKNRKAHFTAPSSVRRILMSA LS DLRSKYNVRSMP+RKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
Subjt:  MKYNPRVSSSRRKNRKAHFTAPSSVRRILMSATLSADLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
        SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
Subjt:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD

XP_022948229.1 60S ribosomal protein L26-1-like [Cucurbita moschata]2.0e-6895.21Show/hide
Query:  MKYNPRVSSSRRKNRKAHFTAPSSVRRILMSATLSADLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRVSSSRRKNRKAHF+APSSVRR+LMSA LS DLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIER+TREKVNGSTVNVG+NP
Subjt:  MKYNPRVSSSRRKNRKAHFTAPSSVRRILMSATLSADLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
        SKVMITKLKLDKDRKSLLDRKAKGRAS+DKDKGTKFTAEDIMQSVD
Subjt:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD

TrEMBL top hitse value%identityAlignment
A0A0A0LJI3 KOW domain-containing protein1.5e-6997.26Show/hide
Query:  MKYNPRVSSSRRKNRKAHFTAPSSVRRILMSATLSADLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRVSSSRRKNRKAHF+APSSVRRILMSATLS DLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKW+IHIERITREKVNGSTVNVGI P
Subjt:  MKYNPRVSSSRRKNRKAHFTAPSSVRRILMSATLSADLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
        SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
Subjt:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD

A0A1S3C7Q4 60S ribosomal protein L26-1-like7.5e-6996.58Show/hide
Query:  MKYNPRVSSSRRKNRKAHFTAPSSVRRILMSATLSADLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRVSSSRRKNRKAHF+APSSVRRILMSA LS DLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKW+IHIERITREKVNGSTVNVGI P
Subjt:  MKYNPRVSSSRRKNRKAHFTAPSSVRRILMSATLSADLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
        SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
Subjt:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD

A0A5A7TS06 60S ribosomal protein L26-1-like7.5e-6996.58Show/hide
Query:  MKYNPRVSSSRRKNRKAHFTAPSSVRRILMSATLSADLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRVSSSRRKNRKAHF+APSSVRRILMSA LS DLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKW+IHIERITREKVNGSTVNVGI P
Subjt:  MKYNPRVSSSRRKNRKAHFTAPSSVRRILMSATLSADLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
        SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
Subjt:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD

A0A6J1D6T1 60S ribosomal protein L26-1-like5.2e-7097.95Show/hide
Query:  MKYNPRVSSSRRKNRKAHFTAPSSVRRILMSATLSADLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRVSSSRRKNRKAHFTAPSSVRRILMSA LS DLRSKYNVRSMP+RKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
Subjt:  MKYNPRVSSSRRKNRKAHFTAPSSVRRILMSATLSADLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
        SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
Subjt:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD

A0A6J1L4P7 60S ribosomal protein L26-1-like9.8e-6995.21Show/hide
Query:  MKYNPRVSSSRRKNRKAHFTAPSSVRRILMSATLSADLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRVSSSRRKNRKAHF+APSSVRR+LMSA LS DLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIER+TREKVNGSTVNVG+NP
Subjt:  MKYNPRVSSSRRKNRKAHFTAPSSVRRILMSATLSADLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
        SKVMITKLKLDKDRKSLLDRKAKGRAS+DKDKGTKFTAEDIMQSVD
Subjt:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD

SwissProt top hitse value%identityAlignment
P51414 60S ribosomal protein L26-13.7e-6585.62Show/hide
Query:  MKYNPRVSSSRRKNRKAHFTAPSSVRRILMSATLSADLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRV+SSRRKNRKAHFTA SS RR++MS+ LS DLR KYNVRSMPIRKDDEVQ++RGTYKGREGKVVQVYRRKWVIHIERITREKVNG+TVNVGI P
Subjt:  MKYNPRVSSSRRKNRKAHFTAPSSVRRILMSATLSADLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
        SKV+ITKL+LDKDRKSLL+RKAKGRA+ADK+KGTKFT+ED+MQ+VD
Subjt:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD

P61254 60S ribosomal protein L261.8e-4367.61Show/hide
Query:  MKYNPRVSSSRRKNRKAHFTAPSSVRRILMSATLSADLRSKYNVRSMPIRKDDEVQVLRGTYKGRE-GKVVQVYRRKWVIHIERITREKVNGSTVNVGIN
        MK+NP V+S R KNRK HF APS +RR +MS+ LS +LR KYNVRSMPIRKDDEVQV+RG YKG++ GKVVQVYR+K+VI+IER+ REK NG+TV+VGI+
Subjt:  MKYNPRVSSSRRKNRKAHFTAPSSVRRILMSATLSADLRSKYNVRSMPIRKDDEVQVLRGTYKGRE-GKVVQVYRRKWVIHIERITREKVNGSTVNVGIN

Query:  PSKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDI
        PSKV+IT+LKLDKDRK +L+RKAK R    K+KG K+  E I
Subjt:  PSKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDI

P61257 60S ribosomal protein L261.8e-4367.61Show/hide
Query:  MKYNPRVSSSRRKNRKAHFTAPSSVRRILMSATLSADLRSKYNVRSMPIRKDDEVQVLRGTYKGRE-GKVVQVYRRKWVIHIERITREKVNGSTVNVGIN
        MK+NP V+S R KNRK HF APS +RR +MS+ LS +LR KYNVRSMPIRKDDEVQV+RG YKG++ GKVVQVYR+K+VI+IER+ REK NG+TV+VGI+
Subjt:  MKYNPRVSSSRRKNRKAHFTAPSSVRRILMSATLSADLRSKYNVRSMPIRKDDEVQVLRGTYKGRE-GKVVQVYRRKWVIHIERITREKVNGSTVNVGIN

Query:  PSKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDI
        PSKV+IT+LKLDKDRK +L+RKAK R    K+KG K+  E I
Subjt:  PSKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDI

Q39411 60S ribosomal protein L261.0e-5980Show/hide
Query:  MKYNPRVSSSRRKNRKAHFTAPSSVRRILMSATLSADLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRV+SSRR+NRK HFTA SS RR+ MS+ LS DLR KYNVRSMPIRKDDE Q++RGTYKGREGK+ QVYRRK VIHIER+TREKVNG+TVNVG+ P
Subjt:  MKYNPRVSSSRRKNRKAHFTAPSSVRRILMSATLSADLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSV
        +KV+ITKL+LDKDRKSLL+RKAKGRA+ADKDKGTKFTA D+MQ+V
Subjt:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSV

Q9FJX2 60S ribosomal protein L26-21.8e-6484.93Show/hide
Query:  MKYNPRVSSSRRKNRKAHFTAPSSVRRILMSATLSADLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MK+NPRVSSSRRKNRKAHFTAPSSVRR+LMS+ LS DLR+K+NVRSMPIRKDDEVQV+RGT+KGREGKV+QVYRRKWVIHIERITREKVNGSTVNVG+N 
Subjt:  MKYNPRVSSSRRKNRKAHFTAPSSVRRILMSATLSADLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
        S VMITKL+LDKDRKSLL+RKA GRA+ADK+KGTKF+AED+M++VD
Subjt:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD

Arabidopsis top hitse value%identityAlignment
AT3G49910.1 Translation protein SH3-like family protein2.6e-6685.62Show/hide
Query:  MKYNPRVSSSRRKNRKAHFTAPSSVRRILMSATLSADLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRV+SSRRKNRKAHFTA SS RR++MS+ LS DLR KYNVRSMPIRKDDEVQ++RGTYKGREGKVVQVYRRKWVIHIERITREKVNG+TVNVGI P
Subjt:  MKYNPRVSSSRRKNRKAHFTAPSSVRRILMSATLSADLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
        SKV+ITKL+LDKDRKSLL+RKAKGRA+ADK+KGTKFT+ED+MQ+VD
Subjt:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD

AT5G67510.1 Translation protein SH3-like family protein1.3e-6584.93Show/hide
Query:  MKYNPRVSSSRRKNRKAHFTAPSSVRRILMSATLSADLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MK+NPRVSSSRRKNRKAHFTAPSSVRR+LMS+ LS DLR+K+NVRSMPIRKDDEVQV+RGT+KGREGKV+QVYRRKWVIHIERITREKVNGSTVNVG+N 
Subjt:  MKYNPRVSSSRRKNRKAHFTAPSSVRRILMSATLSADLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
        S VMITKL+LDKDRKSLL+RKA GRA+ADK+KGTKF+AED+M++VD
Subjt:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTACAACCCTAGAGTCTCAAGCTCCCGCCGCAAGAATCGGAAGGCTCACTTCACAGCGCCGTCGAGCGTACGGCGGATTCTGATGAGTGCAACCCTCTCCGCCGA
CCTGCGCTCCAAGTACAATGTCCGCTCGATGCCGATTCGCAAGGACGACGAAGTTCAGGTCTTGAGGGGAACTTACAAAGGCCGTGAAGGGAAGGTCGTTCAGGTCTACC
GTCGCAAGTGGGTCATTCACATCGAGCGCATCACCAGAGAGAAGGTGAATGGCTCCACCGTCAATGTCGGAATCAATCCGTCCAAGGTTATGATCACAAAGCTCAAGTTG
GACAAGGATAGGAAGTCGCTGCTCGATCGTAAGGCTAAGGGCCGTGCTTCTGCCGATAAGGATAAGGGTACTAAATTCACCGCTGAGGATATTATGCAAAGCGTCGACTA
A
mRNA sequenceShow/hide mRNA sequence
GATACCCCCAGATTCACACAGCAGAGACCAAAACCCTAACACGATGAAGTACAACCCTAGAGTCTCAAGCTCCCGCCGCAAGAATCGGAAGGCTCACTTCACAGCGCCGT
CGAGCGTACGGCGGATTCTGATGAGTGCAACCCTCTCCGCCGACCTGCGCTCCAAGTACAATGTCCGCTCGATGCCGATTCGCAAGGACGACGAAGTTCAGGTCTTGAGG
GGAACTTACAAAGGCCGTGAAGGGAAGGTCGTTCAGGTCTACCGTCGCAAGTGGGTCATTCACATCGAGCGCATCACCAGAGAGAAGGTGAATGGCTCCACCGTCAATGT
CGGAATCAATCCGTCCAAGGTTATGATCACAAAGCTCAAGTTGGACAAGGATAGGAAGTCGCTGCTCGATCGTAAGGCTAAGGGCCGTGCTTCTGCCGATAAGGATAAGG
GTACTAAATTCACCGCTGAGGATATTATGCAAAGCGTCGACTAATTTTGATCTGGTGATAATTTTTGAATGTTCTGTTAGTTCTATCTCCTTCTTTGTTTTGATATATTT
TTTTTACTTATGGTTTTGTTTATTTTGATCCGGAATGAGACAATGTTTTATTGTTTTGATGCTCTGAGTTCTTCTGTTGCTCTCGATACCTGGATTTTTTGTTCTTGTTC
AATGCAATATCATAAGATTCCTTTTGTTAA
Protein sequenceShow/hide protein sequence
MKYNPRVSSSRRKNRKAHFTAPSSVRRILMSATLSADLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVMITKLKL
DKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD