; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0003599 (gene) of Snake gourd v1 genome

Gene IDTan0003599
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUPF0690 protein C1orf52 homolog
Genome locationLG06:8803531..8805977
RNA-Seq ExpressionTan0003599
SyntenyTan0003599
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575926.1 hypothetical protein SDJN03_26565, partial [Cucurbita argyrosperma subsp. sororia]1.6e-7893.75Show/hide
Query:  MPWSDEEDNSSSKESSLSQSDSDADEGSGETKASFRVKAGRSSKEKDTEVKSGKRKSIAVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWSTGRETRE
        MPWSDEEDNSSSKESSLSQSDSDADE SG+ KA FRVKAGRSSKEK TEVKSGKRK+IAVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWSTGRETRE
Subjt:  MPWSDEEDNSSSKESSLSQSDSDADEGSGETKASFRVKAGRSSKEKDTEVKSGKRKSIAVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWSTGRETRE

Query:  NRDTEESFEERQKTRAALENGEQLLTAQTRKEKKNVSFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSGFDT
        NRDTEES+EERQKTRAALENGEQLLTA T+KEKKN+SFSQKEKRKRELGQASRGKNYVEEEKR LRESGIYSGFDT
Subjt:  NRDTEESFEERQKTRAALENGEQLLTAQTRKEKKNVSFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSGFDT

XP_022150145.1 UPF0690 protein C1orf52 homolog [Momordica charantia]2.7e-7891.71Show/hide
Query:  MKRAMPWSDEEDNSSSKESSLSQSDSDADEGSGETKASFRVKA-GRSSKEKDTEVKSGKRKSIAVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWSTG
        MKR MPWSDEEDNSSSK+SSLSQSDSDADE SGETKASFRVKA GRSSKEKDT+VKS KRKS AVDF+ LKRHGYKGGPSVL VPPPKENEKQDWSWS G
Subjt:  MKRAMPWSDEEDNSSSKESSLSQSDSDADEGSGETKASFRVKA-GRSSKEKDTEVKSGKRKSIAVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWSTG

Query:  RETRENRDTEESFEERQKTRAALENGEQLLTAQTRKEKKNVSFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSGFDT
        +ETRENR+TEES+EERQKTRAALENGEQLLTAQTRKEKKN+SFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSGFDT
Subjt:  RETRENRDTEESFEERQKTRAALENGEQLLTAQTRKEKKNVSFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSGFDT

XP_022953507.1 UPF0690 protein C1orf52 homolog [Cucurbita moschata]1.3e-8093.89Show/hide
Query:  MKRAMPWSDEEDNSSSKESSLSQSDSDADEGSGETKASFRVKAGRSSKEKDTEVKSGKRKSIAVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWSTGR
        MKRAMPWSDEEDNSSSKESSLSQSDSDADE SG+ KA FRVKAGRSSKEK TEVKSGKRK+IAVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWSTGR
Subjt:  MKRAMPWSDEEDNSSSKESSLSQSDSDADEGSGETKASFRVKAGRSSKEKDTEVKSGKRKSIAVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWSTGR

Query:  ETRENRDTEESFEERQKTRAALENGEQLLTAQTRKEKKNVSFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSGFDT
        ETRENRDTEES+EERQKTRAALENGEQLLTA T+KEKKN+SFSQKEKRKRELGQASRGKNYVEEEKR LRESGIYSGFDT
Subjt:  ETRENRDTEESFEERQKTRAALENGEQLLTAQTRKEKKNVSFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSGFDT

XP_022991319.1 UPF0690 protein C1orf52 homolog [Cucurbita maxima]1.7e-8093.89Show/hide
Query:  MKRAMPWSDEEDNSSSKESSLSQSDSDADEGSGETKASFRVKAGRSSKEKDTEVKSGKRKSIAVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWSTGR
        MKRAMPWSDEEDNSSSKESSLSQSDSDADE SG+ KA FRVKAGRSSKEK TEVKSGKRKSIAVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWSTGR
Subjt:  MKRAMPWSDEEDNSSSKESSLSQSDSDADEGSGETKASFRVKAGRSSKEKDTEVKSGKRKSIAVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWSTGR

Query:  ETRENRDTEESFEERQKTRAALENGEQLLTAQTRKEKKNVSFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSGFDT
        ETRENR+TEES+EERQKTRAALENGEQLLTA T+KEKKN+SFSQKEKRKRELGQASRGKNYVEEEKR LRESGIYSGFDT
Subjt:  ETRENRDTEESFEERQKTRAALENGEQLLTAQTRKEKKNVSFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSGFDT

XP_038896833.1 UPF0690 protein C1orf52 homolog isoform X1 [Benincasa hispida]1.5e-7689.42Show/hide
Query:  MKRAMPWSDEEDNSSSKESSLSQSDSDADEGSGETKASFRVKAGRSSKEKDTEVKS-GKRKSIAVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWSTG
        MKRA+PWSDEEDNS    SSLSQSDSDADE +GETKASFRVKAGRSSKEKD EVKS GKRKS+AVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWSTG
Subjt:  MKRAMPWSDEEDNSSSKESSLSQSDSDADEGSGETKASFRVKAGRSSKEKDTEVKS-GKRKSIAVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWSTG

Query:  RETRENRDTEESFEERQKTRAALENGEQLLTAQTR--------KEKKNVSFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSGFDT
        RETRENR+TEES+EERQKTRAALENGEQLLTAQTR        KEKKNVSFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSGFDT
Subjt:  RETRENRDTEESFEERQKTRAALENGEQLLTAQTR--------KEKKNVSFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSGFDT

TrEMBL top hitse value%identityAlignment
A0A1S3BRX7 Uncharacterized protein6.0e-7687.43Show/hide
Query:  MKRAMPWSDEEDNSSSKESSLSQSDSDADEGSGETKASFRVKAGRSSKEKDTEVKS-GKRKSIAVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWSTG
        MKRAMPWSDEEDNS    SSLSQSDSD DE +GETKASFRVK GRSSKEKDTEVKS GKRKS+AVDFDTL+RHGY+GGPSVLKVPPPKENEKQDWSWSTG
Subjt:  MKRAMPWSDEEDNSSSKESSLSQSDSDADEGSGETKASFRVKAGRSSKEKDTEVKS-GKRKSIAVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWSTG

Query:  RETRENRDTEESFEERQKTRAALENGEQLLTAQTRK----------EKKNVSFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSGFDT
        RETRENR+TEES+EERQKTRAALENGEQLLTAQTRK          EKKNVSFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSGFDT
Subjt:  RETRENRDTEESFEERQKTRAALENGEQLLTAQTRK----------EKKNVSFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSGFDT

A0A5D3DRL7 UPF0690 protein C1orf52-like protein6.0e-7687.43Show/hide
Query:  MKRAMPWSDEEDNSSSKESSLSQSDSDADEGSGETKASFRVKAGRSSKEKDTEVKS-GKRKSIAVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWSTG
        MKRAMPWSDEEDNS    SSLSQSDSD DE +GETKASFRVK GRSSKEKDTEVKS GKRKS+AVDFDTL+RHGY+GGPSVLKVPPPKENEKQDWSWSTG
Subjt:  MKRAMPWSDEEDNSSSKESSLSQSDSDADEGSGETKASFRVKAGRSSKEKDTEVKS-GKRKSIAVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWSTG

Query:  RETRENRDTEESFEERQKTRAALENGEQLLTAQTRK----------EKKNVSFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSGFDT
        RETRENR+TEES+EERQKTRAALENGEQLLTAQTRK          EKKNVSFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSGFDT
Subjt:  RETRENRDTEESFEERQKTRAALENGEQLLTAQTRK----------EKKNVSFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSGFDT

A0A6J1DAL0 UPF0690 protein C1orf52 homolog1.3e-7891.71Show/hide
Query:  MKRAMPWSDEEDNSSSKESSLSQSDSDADEGSGETKASFRVKA-GRSSKEKDTEVKSGKRKSIAVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWSTG
        MKR MPWSDEEDNSSSK+SSLSQSDSDADE SGETKASFRVKA GRSSKEKDT+VKS KRKS AVDF+ LKRHGYKGGPSVL VPPPKENEKQDWSWS G
Subjt:  MKRAMPWSDEEDNSSSKESSLSQSDSDADEGSGETKASFRVKA-GRSSKEKDTEVKSGKRKSIAVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWSTG

Query:  RETRENRDTEESFEERQKTRAALENGEQLLTAQTRKEKKNVSFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSGFDT
        +ETRENR+TEES+EERQKTRAALENGEQLLTAQTRKEKKN+SFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSGFDT
Subjt:  RETRENRDTEESFEERQKTRAALENGEQLLTAQTRKEKKNVSFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSGFDT

A0A6J1GNF0 UPF0690 protein C1orf52 homolog6.2e-8193.89Show/hide
Query:  MKRAMPWSDEEDNSSSKESSLSQSDSDADEGSGETKASFRVKAGRSSKEKDTEVKSGKRKSIAVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWSTGR
        MKRAMPWSDEEDNSSSKESSLSQSDSDADE SG+ KA FRVKAGRSSKEK TEVKSGKRK+IAVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWSTGR
Subjt:  MKRAMPWSDEEDNSSSKESSLSQSDSDADEGSGETKASFRVKAGRSSKEKDTEVKSGKRKSIAVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWSTGR

Query:  ETRENRDTEESFEERQKTRAALENGEQLLTAQTRKEKKNVSFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSGFDT
        ETRENRDTEES+EERQKTRAALENGEQLLTA T+KEKKN+SFSQKEKRKRELGQASRGKNYVEEEKR LRESGIYSGFDT
Subjt:  ETRENRDTEESFEERQKTRAALENGEQLLTAQTRKEKKNVSFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSGFDT

A0A6J1JUH2 UPF0690 protein C1orf52 homolog8.1e-8193.89Show/hide
Query:  MKRAMPWSDEEDNSSSKESSLSQSDSDADEGSGETKASFRVKAGRSSKEKDTEVKSGKRKSIAVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWSTGR
        MKRAMPWSDEEDNSSSKESSLSQSDSDADE SG+ KA FRVKAGRSSKEK TEVKSGKRKSIAVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWSTGR
Subjt:  MKRAMPWSDEEDNSSSKESSLSQSDSDADEGSGETKASFRVKAGRSSKEKDTEVKSGKRKSIAVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWSTGR

Query:  ETRENRDTEESFEERQKTRAALENGEQLLTAQTRKEKKNVSFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSGFDT
        ETRENR+TEES+EERQKTRAALENGEQLLTA T+KEKKN+SFSQKEKRKRELGQASRGKNYVEEEKR LRESGIYSGFDT
Subjt:  ETRENRDTEESFEERQKTRAALENGEQLLTAQTRKEKKNVSFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSGFDT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G04614.1 unknown protein1.7e-3046.67Show/hide
Query:  KRAMPWSDEEDNSSSKESSLSQSDSDADEGSGETKASFRVKAGRSSKEKDTEVKSGKRKSIAVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWSTGRE
        K  M W D++D+     S  S S S +D     T+   + K  +S K      K  K+   A D+++L++HGYK    +  +P P   EKQDWSW+TG++
Subjt:  KRAMPWSDEEDNSSSKESSLSQSDSDADEGSGETKASFRVKAGRSSKEKDTEVKSGKRKSIAVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWSTGRE

Query:  TRENRDTEESFEERQKTR-AALENGEQLLTAQTRKEKKNVSFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSGFDT
         +   + +ES++ER+ TR AA+  GE +  AQ R ++KN+SFSQKEK+KR+LGQASRGKNYVEEEKR LRESG+YSGFD+
Subjt:  TRENRDTEESFEERQKTR-AALENGEQLLTAQTRKEKKNVSFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSGFDT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAAGGGCAATGCCATGGAGTGATGAAGAGGACAATTCGTCATCTAAAGAGTCTTCTTTATCACAGTCGGATTCAGACGCTGATGAAGGTAGTGGCGAGACAAAAGC
AAGCTTTCGAGTTAAAGCTGGCCGGTCCTCTAAAGAAAAAGACACTGAAGTCAAATCTGGAAAACGGAAGAGCATTGCTGTGGACTTTGATACATTGAAACGCCATGGCT
ACAAAGGTGGTCCATCAGTCTTGAAAGTGCCGCCACCAAAAGAGAATGAGAAGCAAGATTGGTCATGGTCTACTGGTAGAGAGACTCGGGAAAACAGAGACACTGAAGAA
TCGTTTGAAGAGAGACAGAAAACAAGAGCTGCATTAGAAAATGGAGAGCAGCTGCTAACCGCGCAAACTCGGAAGGAGAAGAAGAATGTTTCCTTCTCCCAGAAAGAAAA
GAGGAAAAGAGAGCTCGGTCAAGCAAGCAGGGGGAAGAATTATGTCGAGGAAGAAAAGAGAATGTTGAGGGAGAGTGGCATCTACTCTGGTTTTGATACCTGA
mRNA sequenceShow/hide mRNA sequence
CTAAGCCCCTGAATCTATCGGGAAAGGAGGGCTTTCATTTTCTTTTCCACATTTTCGCAAGCCCTAACTTCCAATCAAAGCTCACTCGCCAGCTTCGGGCACCTAATTTT
TGCTTGATTGGACTTGCTTTGCCATGAAAAGGGCAATGCCATGGAGTGATGAAGAGGACAATTCGTCATCTAAAGAGTCTTCTTTATCACAGTCGGATTCAGACGCTGAT
GAAGGTAGTGGCGAGACAAAAGCAAGCTTTCGAGTTAAAGCTGGCCGGTCCTCTAAAGAAAAAGACACTGAAGTCAAATCTGGAAAACGGAAGAGCATTGCTGTGGACTT
TGATACATTGAAACGCCATGGCTACAAAGGTGGTCCATCAGTCTTGAAAGTGCCGCCACCAAAAGAGAATGAGAAGCAAGATTGGTCATGGTCTACTGGTAGAGAGACTC
GGGAAAACAGAGACACTGAAGAATCGTTTGAAGAGAGACAGAAAACAAGAGCTGCATTAGAAAATGGAGAGCAGCTGCTAACCGCGCAAACTCGGAAGGAGAAGAAGAAT
GTTTCCTTCTCCCAGAAAGAAAAGAGGAAAAGAGAGCTCGGTCAAGCAAGCAGGGGGAAGAATTATGTCGAGGAAGAAAAGAGAATGTTGAGGGAGAGTGGCATCTACTC
TGGTTTTGATACCTGACCTATCATTTCAACGAAATTGCTAACAATGCATTTCATGTCAAAGCTTTATGTTTCAAGATTATATTTGCAGTGGACTGTATTATTTACCCCAA
CAAGCCAGCTGACAGGAGCCAAGGTTTGATGCACTGCAAGACATCGACAATCCTTATTTGTTTCGGGACCGGTCACATATGTAAAGGCAACTTTCTATCATCTTCATGCA
TTTAAGGTACATATGAAAATGGGGTATAGCATACTGGTTATTCAGTTGTATCAGGTATGTTGTTTTCATTATCATAGATAAAACAGCCTCAATAACCCAACAGTTGTATA
TGATGGTGAAAGAAGCTGTTTATCACCAAGAATTTGCGTTTTGAAACTCTTTGGGACGTTAATGATTGCTTGATGATGTTGCAGGAGAAAGGGATGGGAAGAGATATTTT
CTATCTTTTAACAATTAAATGGCTTATGTCTTCAAATAAATTGGATGATTCAATTTGATCATGGTTATTTTGTTTTGATGCAAATCAACCAAGGCAAGAATTTATGTTTT
ACATTTAATTAAAATTCTCTTTCGTTTTTTCTTTTTCCTTTTAATGAAGTGATATAATATGATTTGCTCGTGTAAGATATGGACAAGTATATAATTTGCAATTGTGATAC
CATATTACGTATAAAATGAG
Protein sequenceShow/hide protein sequence
MKRAMPWSDEEDNSSSKESSLSQSDSDADEGSGETKASFRVKAGRSSKEKDTEVKSGKRKSIAVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWSTGRETRENRDTEE
SFEERQKTRAALENGEQLLTAQTRKEKKNVSFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSGFDT