; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0003610 (gene) of Snake gourd v1 genome

Gene IDTan0003610
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionNuclear polyadenylated RNA-binding protein 3-like
Genome locationLG02:7271246..7272362
RNA-Seq ExpressionTan0003610
SyntenyTan0003610
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588426.1 hypothetical protein SDJN03_16991, partial [Cucurbita argyrosperma subsp. sororia]8.4e-7376.28Show/hide
Query:  MEALSGASSSSSSSVEFVFYDDFEYEFVEEVERLSNWELLDASDADFDMDRNGG------------EEEEEEEEEGENCSVDGRFPEDLRERRISPVVAV
        MEALSGA+SSSSSSVEFVF+DD EYEFVEEVERLSNWELLDASDADF++D NG             EEEEEEEEEGE+CSVD R P+DLR +R   VVA+
Subjt:  MEALSGASSSSSSSVEFVFYDDFEYEFVEEVERLSNWELLDASDADFDMDRNGG------------EEEEEEEEEGENCSVDGRFPEDLRERRISPVVAV

Query:  PI-SLAEDRIDGPLDGVYFLQIQEEDGFAYGYDGYNDAEEDETEDD--DVDDDGDEFDLDDELVPWSVSGKLGRQRMRKLGKRGFTKMYNSKRSPFLFTK
        PI SL E+RIDGP D VY LQ Q E+GFAY   G ND EEDE++DD  D DDDGDE DLDDELVPWSVS KLGRQRMRKLGKRGFT+MYNSKRSPFLFTK
Subjt:  PI-SLAEDRIDGPLDGVYFLQIQEEDGFAYGYDGYNDAEEDETEDD--DVDDDGDEFDLDDELVPWSVSGKLGRQRMRKLGKRGFTKMYNSKRSPFLFTK

Query:  PGCVRGKHGLGLKHS
        PGCVRGKHGLGLKHS
Subjt:  PGCVRGKHGLGLKHS

XP_022934009.1 NAD-dependent protein deacetylase HST1-like [Cucurbita moschata]3.8e-7379.51Show/hide
Query:  MEALSGASSSSSSSVEFVFYDDFEYEFVEEVERLSNWELLDASDADFDMDRNGG--EEEEEEEEEGENCSVDGRFPEDLRERRISPVVAVPI-SLAEDRI
        MEA SGA+SSSSSSVEFVF+DD EYEFVEEVERLSNWELLDASDADF++D NG   EEEEEEEEEGE+CSVD R P+DLR +R   VVA+PI SL E+RI
Subjt:  MEALSGASSSSSSSVEFVFYDDFEYEFVEEVERLSNWELLDASDADFDMDRNGG--EEEEEEEEEGENCSVDGRFPEDLRERRISPVVAVPI-SLAEDRI

Query:  DGPLDGVYFLQIQEEDGFAYGYDGYNDAEEDETEDD--DVDDDGDEFDLDDELVPWSVSGKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGL
        DGP D VY LQ Q E+GFAY   G ND EEDE++DD  D DDDGDE DLDDELVPWSVS KLGRQRMRKLGKRGFT+MYNSKRSPFLFTKPGCVRGKHGL
Subjt:  DGPLDGVYFLQIQEEDGFAYGYDGYNDAEEDETEDD--DVDDDGDEFDLDDELVPWSVSGKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGL

Query:  GLKHS
        GLKHS
Subjt:  GLKHS

XP_022971487.1 NAD-dependent protein deacetylase HST1-like [Cucurbita maxima]8.4e-7379.51Show/hide
Query:  MEALSGA--SSSSSSSVEFVFYDDFEYEFVEEVERLSNWELLDASDADFDMDRNGGEEEEEEEEEGENCSVDGRFPEDLRERRISPVVAVPI-SLAEDRI
        MEALSGA  SSSSSSSVEFVF+DD EYEFVEEVERLSNWELLDASDADF++D NG E EEEEEEE ENCSVD   P+DLR +R   VVA+PI SL E+RI
Subjt:  MEALSGA--SSSSSSSVEFVFYDDFEYEFVEEVERLSNWELLDASDADFDMDRNGGEEEEEEEEEGENCSVDGRFPEDLRERRISPVVAVPI-SLAEDRI

Query:  DGPLDGVYFLQIQEEDGFAYGYDGYNDAEEDETEDD--DVDDDGDEFDLDDELVPWSVSGKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGL
        DGP D VY LQ Q EDGFAY   G N+ EEDE++DD  D DDDGDE DLDDELVPWSVS KLGRQRMRKLGKRGFT+MYNSKRSPFLFTKPGCVRGKHGL
Subjt:  DGPLDGVYFLQIQEEDGFAYGYDGYNDAEEDETEDD--DVDDDGDEFDLDDELVPWSVSGKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGL

Query:  GLKHS
        GLKHS
Subjt:  GLKHS

XP_023529313.1 NAD-dependent protein deacetylase HST1-like [Cucurbita pepo subsp. pepo]5.2e-7580.3Show/hide
Query:  MEALSGASSSSSSSVEFVFYDDFEYEFVEEVERLSNWELLDASDADFDMDRNGGEEEEEEEEEGENCSVDGRFPEDLRERRISPVVAVPI-SLAEDRIDG
        ME+LS A+SSSSSSVEFVF+DD EYEFVEEVERLSNWELLDASDADF++D NG E+EEEEEEEGENCSVD R P+DLR +R   VVA+PI SL E+RIDG
Subjt:  MEALSGASSSSSSSVEFVFYDDFEYEFVEEVERLSNWELLDASDADFDMDRNGGEEEEEEEEEGENCSVDGRFPEDLRERRISPVVAVPI-SLAEDRIDG

Query:  PLDGVYFLQIQEEDGFAYGYDGYNDAEEDETEDD--DVDDDGDEFDLDDELVPWSVSGKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGL
        P D VY LQ Q EDGFAY   G ND EEDE++DD  D DDDGDE DLDDELVPWSVS KLGRQRMRKLGKRGFT+MYNSKRSPFLFTKPGCVRGKHGLGL
Subjt:  PLDGVYFLQIQEEDGFAYGYDGYNDAEEDETEDD--DVDDDGDEFDLDDELVPWSVSGKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGL

Query:  KHS
        KHS
Subjt:  KHS

XP_023553634.1 histone H2A.Z-specific chaperone CHZ1-like [Cucurbita pepo subsp. pepo]1.3e-7378.16Show/hide
Query:  MEALSGASSSSSSSVEFVFYDDFEYEFVEEVERLSNWELLDASDADFDMDRNGGEEEEEEEEEGENCSVDGRFPEDLRERRISPVVAVPISLAEDRIDGP
        MEA+SGASSSSSSSVEF FYDDFEYEFVE+VERLSNWE L+ASDAD +MD NGG      E+EG+NC V  R PEDLRE  ISPVV VPISLAEDRI  P
Subjt:  MEALSGASSSSSSSVEFVFYDDFEYEFVEEVERLSNWELLDASDADFDMDRNGGEEEEEEEEEGENCSVDGRFPEDLRERRISPVVAVPISLAEDRIDGP

Query:  LDGVYFLQIQEEDGFAYGYDGYNDAEEDE-----TEDDDVDDDGDEFDLDDELVPWSVSGKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGL
        L+ VYFLQ   EDGFAY   GYNDAEEDE      +DDD DDD DE DLDDELVPWSVS KLGRQRMRKLGKRGFT+MYNSKRSPFLFTKPGCVRGKHGL
Subjt:  LDGVYFLQIQEEDGFAYGYDGYNDAEEDE-----TEDDDVDDDGDEFDLDDELVPWSVSGKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGL

Query:  GLKHSY
        GLKHSY
Subjt:  GLKHSY

TrEMBL top hitse value%identityAlignment
A0A0A0K4F3 Uncharacterized protein2.6e-7277.11Show/hide
Query:  MEALSGASSSSSSSVEFVFYDDFEYEFVEEVERLSNWELLDASDADFDMDRNGGEEEEEEEEEGENCSVDGRFPEDLRERRISPVVAVPISLAEDRIDGP
        MEA+SG+SSSSSSS+EFVFYDDFEYEFVE++ERLSNWELLDA DAD +M  NGG      EE+G NCSVD    +DLRE  ISPV+AVPISL EDRID  
Subjt:  MEALSGASSSSSSSVEFVFYDDFEYEFVEEVERLSNWELLDASDADFDMDRNGGEEEEEEEEEGENCSVDGRFPEDLRERRISPVVAVPISLAEDRIDGP

Query:  LDGVYFLQIQEEDGFAYGYDGYNDAEEDETEDDDVDDDGDEFDLDDELVPWSVSGKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLKHS
        L+  YFL  Q EDGFAY   GYNDAE    E+D+VDDD DEFDLDDELVPWSVS KLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLKHS
Subjt:  LDGVYFLQIQEEDGFAYGYDGYNDAEEDETEDDDVDDDGDEFDLDDELVPWSVSGKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLKHS

Query:  Y
        Y
Subjt:  Y

A0A5A7SRG7 Nuclear polyadenylated RNA-binding protein 3-like3.9e-6876.12Show/hide
Query:  MEALSGASSSSSSSVEFVFYDDFEYEFVEEVERLSNWELLDASDADFDMDRNGGEEEEEEEEEGENCSVDGRFPEDLRERRISPVVAVPISLAEDRIDGP
        MEA+SG  SSSSSS+EFVFYDDFEYEFVE++ERLSNWELLDA DAD +M  NGG      EE+GEN SVD    +DLRE  ISPV+AVPISL EDRIDG 
Subjt:  MEALSGASSSSSSSVEFVFYDDFEYEFVEEVERLSNWELLDASDADFDMDRNGGEEEEEEEEEGENCSVDGRFPEDLRERRISPVVAVPISLAEDRIDGP

Query:  LDGVYFLQIQEEDGFAYGYDGYNDAEEDETEDDDVDDDGDEFDLDDELVPWSVSGKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLKHS
        L+   FL  Q EDGFAYGYD   DAEE   ED+  DD+ DEFDLDDELVPWSVS KLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLKHS
Subjt:  LDGVYFLQIQEEDGFAYGYDGYNDAEEDETEDDDVDDDGDEFDLDDELVPWSVSGKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLKHS

Query:  Y
        Y
Subjt:  Y

A0A6J1F1D0 NAD-dependent protein deacetylase HST1-like1.8e-7379.51Show/hide
Query:  MEALSGASSSSSSSVEFVFYDDFEYEFVEEVERLSNWELLDASDADFDMDRNGG--EEEEEEEEEGENCSVDGRFPEDLRERRISPVVAVPI-SLAEDRI
        MEA SGA+SSSSSSVEFVF+DD EYEFVEEVERLSNWELLDASDADF++D NG   EEEEEEEEEGE+CSVD R P+DLR +R   VVA+PI SL E+RI
Subjt:  MEALSGASSSSSSSVEFVFYDDFEYEFVEEVERLSNWELLDASDADFDMDRNGG--EEEEEEEEEGENCSVDGRFPEDLRERRISPVVAVPI-SLAEDRI

Query:  DGPLDGVYFLQIQEEDGFAYGYDGYNDAEEDETEDD--DVDDDGDEFDLDDELVPWSVSGKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGL
        DGP D VY LQ Q E+GFAY   G ND EEDE++DD  D DDDGDE DLDDELVPWSVS KLGRQRMRKLGKRGFT+MYNSKRSPFLFTKPGCVRGKHGL
Subjt:  DGPLDGVYFLQIQEEDGFAYGYDGYNDAEEDETEDD--DVDDDGDEFDLDDELVPWSVSGKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGL

Query:  GLKHS
        GLKHS
Subjt:  GLKHS

A0A6J1I004 uncharacterized protein LOC1114684624.5e-7277.67Show/hide
Query:  MEALSGA---SSSSSSSVEFVFYDDFEYEFVEEVERLSNWELLDASDADFDMDRNGGEEEEEEEEEGENCSVDGRFPEDLRERRISPVVAVPISLAEDRI
        MEA+SGA   SSSSSSSVEF FYDDFEYEFVE+VERLSNWE L+ASDAD +MD NGG      E+EG+NC V  R PEDL E  ISPVV VPISLAEDRI
Subjt:  MEALSGA---SSSSSSSVEFVFYDDFEYEFVEEVERLSNWELLDASDADFDMDRNGGEEEEEEEEEGENCSVDGRFPEDLRERRISPVVAVPISLAEDRI

Query:  DGPLDGVYFLQIQEEDGFAYGYDGYNDAEEDETEDDDVDDDG--DEFDLDDELVPWSVSGKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGL
          PL+ VYFLQ   EDGFAY   GYNDAEEDET+ DD DDD   DE DLDDELVPWSVS KLGRQRMRKLGKRGFT+MYNSKRSPFLFTKPGCVRGKHGL
Subjt:  DGPLDGVYFLQIQEEDGFAYGYDGYNDAEEDETEDDDVDDDG--DEFDLDDELVPWSVSGKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGL

Query:  GLKHSY
        GLKHSY
Subjt:  GLKHSY

A0A6J1I229 NAD-dependent protein deacetylase HST1-like4.1e-7379.51Show/hide
Query:  MEALSGA--SSSSSSSVEFVFYDDFEYEFVEEVERLSNWELLDASDADFDMDRNGGEEEEEEEEEGENCSVDGRFPEDLRERRISPVVAVPI-SLAEDRI
        MEALSGA  SSSSSSSVEFVF+DD EYEFVEEVERLSNWELLDASDADF++D NG E EEEEEEE ENCSVD   P+DLR +R   VVA+PI SL E+RI
Subjt:  MEALSGA--SSSSSSSVEFVFYDDFEYEFVEEVERLSNWELLDASDADFDMDRNGGEEEEEEEEEGENCSVDGRFPEDLRERRISPVVAVPI-SLAEDRI

Query:  DGPLDGVYFLQIQEEDGFAYGYDGYNDAEEDETEDD--DVDDDGDEFDLDDELVPWSVSGKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGL
        DGP D VY LQ Q EDGFAY   G N+ EEDE++DD  D DDDGDE DLDDELVPWSVS KLGRQRMRKLGKRGFT+MYNSKRSPFLFTKPGCVRGKHGL
Subjt:  DGPLDGVYFLQIQEEDGFAYGYDGYNDAEEDETEDD--DVDDDGDEFDLDDELVPWSVSGKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGL

Query:  GLKHS
        GLKHS
Subjt:  GLKHS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G34630.1 unknown protein9.1e-1761.18Show/hide
Query:  GFAYGYDGYNDAEEDETEDDDVDDDGDEFDLDDELVPWSVSGKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLK
        G  YG D  ND  E++ E D      D +DLD+ELVP SVS K+GRQRMRKLGKR   K+Y SK SPFL  KPG VRGKHGLG+K
Subjt:  GFAYGYDGYNDAEEDETEDDDVDDDGDEFDLDDELVPWSVSGKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLK

AT5G48420.1 unknown protein6.1e-0536.52Show/hide
Query:  VAVPISLAEDRIDGPLDGVYFLQIQEEDGFAYGYDGYNDAEEDETEDDDVDDDGDEFDLDDELVPWSVSGKLGRQRMRKLGKRGFTKMYNSKRSPFLFT-
        V+ P++ + DR+DG       + + E+  ++   DG N    D  E+DD  D  D+ D D ELV          QR+RK GKR F K    K+  + ++ 
Subjt:  VAVPISLAEDRIDGPLDGVYFLQIQEEDGFAYGYDGYNDAEEDETEDDDVDDDGDEFDLDDELVPWSVSGKLGRQRMRKLGKRGFTKMYNSKRSPFLFT-

Query:  -KPGCVRGKHGLGLK
         KPGCV GKHGL +K
Subjt:  -KPGCVRGKHGLGLK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGCCCTTTCTGGAGCATCATCTTCATCTTCATCGTCTGTTGAATTTGTGTTTTACGATGATTTTGAGTACGAATTTGTTGAAGAAGTCGAACGCCTCTCGAACTG
GGAGTTGCTCGATGCTTCAGATGCCGATTTCGATATGGACAGAAATGGAGGTGAAGAAGAAGAAGAAGAAGAAGAAGAAGGGGAAAATTGCAGCGTTGACGGCCGATTTC
CTGAGGATCTTCGAGAGAGGAGGATTTCTCCTGTTGTAGCGGTGCCGATTTCTCTTGCGGAGGACCGAATCGACGGTCCTTTGGATGGTGTTTATTTTCTTCAGATTCAG
GAGGAAGACGGTTTCGCGTACGGTTACGACGGTTACAACGATGCGGAGGAGGATGAAACCGAAGACGACGATGTTGATGATGATGGAGATGAGTTCGATTTGGACGACGA
ACTCGTTCCGTGGTCCGTCAGTGGCAAACTCGGACGGCAGAGGATGAGGAAATTAGGGAAAAGAGGTTTTACGAAGATGTATAATTCGAAGAGATCGCCGTTTTTGTTCA
CCAAGCCTGGATGTGTCCGCGGCAAGCACGGACTCGGCTTGAAGCACAGTTATTAG
mRNA sequenceShow/hide mRNA sequence
CTGTAAAGCGAAGAAAACAAAACAACCAACAATTATCGAATCAATTTCACAGAGAGAAATCAGATCGATAATAATGGAGGCCCTTTCTGGAGCATCATCTTCATCTTCAT
CGTCTGTTGAATTTGTGTTTTACGATGATTTTGAGTACGAATTTGTTGAAGAAGTCGAACGCCTCTCGAACTGGGAGTTGCTCGATGCTTCAGATGCCGATTTCGATATG
GACAGAAATGGAGGTGAAGAAGAAGAAGAAGAAGAAGAAGAAGGGGAAAATTGCAGCGTTGACGGCCGATTTCCTGAGGATCTTCGAGAGAGGAGGATTTCTCCTGTTGT
AGCGGTGCCGATTTCTCTTGCGGAGGACCGAATCGACGGTCCTTTGGATGGTGTTTATTTTCTTCAGATTCAGGAGGAAGACGGTTTCGCGTACGGTTACGACGGTTACA
ACGATGCGGAGGAGGATGAAACCGAAGACGACGATGTTGATGATGATGGAGATGAGTTCGATTTGGACGACGAACTCGTTCCGTGGTCCGTCAGTGGCAAACTCGGACGG
CAGAGGATGAGGAAATTAGGGAAAAGAGGTTTTACGAAGATGTATAATTCGAAGAGATCGCCGTTTTTGTTCACCAAGCCTGGATGTGTCCGCGGCAAGCACGGACTCGG
CTTGAAGCACAGTTATTAGAACAAGAACAGCATCAACAACTCCTCTTCTCGATCAAATGCCTTAAAAAGGTAACCGAATCTAATTCCAATTCGGCTTAGAAGTAAATAGA
TGTAATAAAAAGAAAAATTAGTAGTTGCGTTTGTTGTAAGTAGAAGTAACTAGTTAATCTGTAAATCGAATTTGCTGGAATGGTTTCAGTTGATTTTCAAGGCTTGGATG
GATGAACATGAACAAGATTCATGAACATAAACACTAACTCGCATATCATCTTTGTGAATTAATCATCAATCTTATGTCCACAAAATTGTTAATTGCTATGCCTTGTTGGT
TAGCTGTTCGGTTGTTTTGTTTGTGATTCATGTAATTTGTACCAAAAATCTGGAATCTGAGCCACACCATCTCTGAACAATTGACATATTTTGTATCATTTCTCAAGTTT
AAGCCAAGCGTCTGATC
Protein sequenceShow/hide protein sequence
MEALSGASSSSSSSVEFVFYDDFEYEFVEEVERLSNWELLDASDADFDMDRNGGEEEEEEEEEGENCSVDGRFPEDLRERRISPVVAVPISLAEDRIDGPLDGVYFLQIQ
EEDGFAYGYDGYNDAEEDETEDDDVDDDGDEFDLDDELVPWSVSGKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLKHSY