CuGenDBv2

Gene ID	Tan0003621
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Photosystem I P700 chlorophyll a apoprotein A1
Genome location	LG04:71121507..71121860
RNA-Seq Expression	Tan0003621
Synteny	Tan0003621
Gene Ontology terms	GO:0015979 - photosynthesis (biological process) GO:0018298 - protein-chromophore linkage (biological process) GO:0022900 - electron transport chain (biological process) GO:0009522 - photosystem I (cellular component) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0000287 - magnesium ion binding (molecular function) GO:0009055 - electron transfer activity (molecular function) GO:0016168 - chlorophyll binding (molecular function) GO:0051539 - 4 iron, 4 sulfur cluster binding (molecular function)
InterPro domains	IPR001280 - Photosystem I PsaA/PsaB IPR006243 - Photosystem I PsaA IPR036408 - Photosystem I PsaA/PsaB superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

YP_009447450.1 photosystem I P700 chlorophyll a apoprotein A1 [Cucurbita maxima]

2.3e-54

100

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Query:  MVRDYDPTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWGG
        MVRDYDPTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWGG
Subjt:  MVRDYDPTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWGG

Query:  GDLVA
        GDLVA
Subjt:  GDLVA

YP_009447535.1 photosystem I P700 chlorophyll a apoprotein A1 [Cucurbita moschata]

2.3e-54

100

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Query:  MVRDYDPTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWGG
        MVRDYDPTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWGG
Subjt:  MVRDYDPTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWGG

Query:  GDLVA
        GDLVA
Subjt:  GDLVA

YP_009751738.1 photosystem I P700 apoprotein A1 [Herpetospermum pedunculosum]

2.3e-54

100

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Query:  MVRDYDPTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWGG
        MVRDYDPTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWGG
Subjt:  MVRDYDPTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWGG

Query:  GDLVA
        GDLVA
Subjt:  GDLVA

YP_009752243.1 photosystem I P700 apoprotein A1 [Trichosanthes baviensis]

2.3e-54

100

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Query:  MVRDYDPTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWGG
        MVRDYDPTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWGG
Subjt:  MVRDYDPTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWGG

Query:  GDLVA
        GDLVA
Subjt:  GDLVA

YP_009753174.1 photosystem I P700 apoprotein A1 [Trichosanthes truncata]

2.3e-54

100

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Query:  MVRDYDPTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWGG
        MVRDYDPTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWGG
Subjt:  MVRDYDPTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWGG

Query:  GDLVA
        GDLVA
Subjt:  GDLVA

TrEMBL top hits

e value

%identity

Alignment

A0A1P8LDX9 Photosystem I P700 chlorophyll a apoprotein A1

1.1e-54

100

Show/hide

Query:  MVRDYDPTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWGG
        MVRDYDPTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWGG
Subjt:  MVRDYDPTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWGG

Query:  GDLVA
        GDLVA
Subjt:  GDLVA

A0A2Z2CGB0 Photosystem I P700 chlorophyll a apoprotein A1

1.1e-54

100

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Query:  MVRDYDPTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWGG
        MVRDYDPTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWGG
Subjt:  MVRDYDPTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWGG

Query:  GDLVA
        GDLVA
Subjt:  GDLVA

A0A410HF85 Photosystem I P700 chlorophyll a apoprotein A1

1.1e-54

100

Show/hide

Query:  MVRDYDPTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWGG
        MVRDYDPTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWGG
Subjt:  MVRDYDPTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWGG

Query:  GDLVA
        GDLVA
Subjt:  GDLVA

A0A6M3RWM8 Photosystem I P700 chlorophyll a apoprotein A1

1.1e-54

100

Show/hide

Query:  MVRDYDPTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWGG
        MVRDYDPTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWGG
Subjt:  MVRDYDPTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWGG

Query:  GDLVA
        GDLVA
Subjt:  GDLVA

X2F5B1 Photosystem I P700 chlorophyll a apoprotein A1

1.1e-54

100

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Query:  MVRDYDPTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWGG
        MVRDYDPTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWGG
Subjt:  MVRDYDPTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWGG

Query:  GDLVA
        GDLVA
Subjt:  GDLVA

SwissProt top hits

e value

%identity

Alignment

P58310 Photosystem I P700 chlorophyll a apoprotein A1

1.1e-56

98.1

Show/hide

Query:  MVRDYDPTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWGG
        MVRDYDPTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQP+FAQWIQNTHALAP ITAPGATTGTSLTWGG
Subjt:  MVRDYDPTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWGG

Query:  GDLVA
        GDLVA
Subjt:  GDLVA

Q09X17 Photosystem I P700 chlorophyll a apoprotein A1

1.6e-55

97.14

Show/hide

Query:  MVRDYDPTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWGG
        MVRDYDPTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAP  TAPGATT TSLTWGG
Subjt:  MVRDYDPTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWGG

Query:  GDLVA
        GDLVA
Subjt:  GDLVA

Q0G9W2 Photosystem I P700 chlorophyll a apoprotein A1

1.6e-55

97.14

Show/hide

Query:  MVRDYDPTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWGG
        MVRDYDPTTRYNDLLDRVLRHRDAIISHLNW CIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAPS TAPGATT TSLTWGG
Subjt:  MVRDYDPTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWGG

Query:  GDLVA
        GDLVA
Subjt:  GDLVA

Q2QD89 Photosystem I P700 chlorophyll a apoprotein A1

1.1e-56

99.05

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Query:  MVRDYDPTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWGG
        MVRDYDPTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAP ITAPGATTGTSLTWGG
Subjt:  MVRDYDPTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWGG

Query:  GDLVA
        GDLVA
Subjt:  GDLVA

Q6EW48 Photosystem I P700 chlorophyll a apoprotein A1

5.6e-56

97.14

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Query:  MVRDYDPTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWGG
        MVRDYDPTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQP+FAQWIQNTHALAPS TAPGAT GTSLTWGG
Subjt:  MVRDYDPTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWGG

Query:  GDLVA
        GDLVA
Subjt:  GDLVA

Arabidopsis top hits

e value

%identity

Alignment

ATCG00340.1 Photosystem I, PsaA/PsaB protein

2.5e-19

42.72

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Query:  VRDYDPTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTH--------ALAPSITAPGATTG
        +RDY+P    +++L R+L H++AIISHL+W  +FLGFH+ GLY+HND M A G P+       I ++P+FAQWIQ+ H         L  S + P    G
Subjt:  VRDYDPTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTH--------ALAPSITAPGATTG

Query:  TSL
         S+
Subjt:  TSL

ATCG00350.1 Photosystem I, PsaA/PsaB protein

6.4e-55

93.33

Show/hide

Query:  MVRDYDPTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWGG
        MVRDYDPT RYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAP +TAPG T  TSLTWGG
Subjt:  MVRDYDPTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWGG

Query:  GDLVA
        G+LVA
Subjt:  GDLVA

Sequences

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CDS sequence

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ATGGTAAGAGACTATGATCCAACTACTCGTTACAACGATCTATTAGATCGTGTACTTAGGCATCGCGATGCAATCATATCACATCTCAACTGGGTGTGTATATTTTTAGG
CTTTCACAGTTTTGGTTTGTATATTCATAATGATACCATGAGTGCTTTAGGGCGTCCTCAAGATATGTTTTCAGATACCGCTATACAATTACAACCCGTCTTTGCTCAAT
GGATACAAAACACCCATGCTTTAGCACCTAGTATAACGGCCCCCGGTGCAACAACAGGCACCAGTTTGACTTGGGGGGGTGGTGATTTAGTGGCAGATTTATTCACACAA
TATTTAAGTTTAAAGACTTACTAA

mRNA sequence

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Protein sequence

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MVRDYDPTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWGGGDLVADLFTQ
YLSLKTY

Tan0003621 (gene) of Snake gourd v1 genome