; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0003642 (gene) of Snake gourd v1 genome

Gene IDTan0003642
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionF-box protein SKIP31-like
Genome locationLG01:105617209..105621673
RNA-Seq ExpressionTan0003642
SyntenyTan0003642
Gene Ontology termsGO:0006511 - ubiquitin-dependent protein catabolic process (biological process)
GO:0016567 - protein ubiquitination (biological process)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR001810 - F-box domain
IPR036047 - F-box-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008444220.1 PREDICTED: F-box protein SKIP31 isoform X1 [Cucumis melo]9.7e-17292.55Show/hide
Query:  MSIPDEEDEFLAHFLESEVLSEVSDKEEGNAEEEPKPKRARIEQINPNEQREVASVTTSSSQSKGVVPGRIETGIFSKIPPEIFRHILKFLSSEDLISCS
        M+IPDE+DEFLA FLESEVLSEVSDKEEGN +EEPKPKRARIEQI+PNEQREV SVT+SSSQSKGVVPGRIE+GIFSKIPPE+FRHILKFLSSEDLISCS
Subjt:  MSIPDEEDEFLAHFLESEVLSEVSDKEEGNAEEEPKPKRARIEQINPNEQREVASVTTSSSQSKGVVPGRIETGIFSKIPPEIFRHILKFLSSEDLISCS

Query:  LVCRFLNSVASDESLWRRLYCLRWGLLPATKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKQYYIQMQAAKRSQAPLPSQVQDDQIILDRTVADQVSTW
        LVCRFLNS ASDESLWRRLYCLRWG+LP +KKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFK+YYIQMQAAKRSQAPLPSQVQDDQIILDRT+ADQVSTW
Subjt:  LVCRFLNSVASDESLWRRLYCLRWGLLPATKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKQYYIQMQAAKRSQAPLPSQVQDDQIILDRTVADQVSTW

Query:  KSSRGLTDKIVIDHNCSGETCTYYQIGDAFVCEKTGVVHVCDDTCREVIMDPNDEQLVCRISGHCFDTLLLPDCMEPDPEQQQAGATDEAEPFMGSGRFA
        KSSRGLTDKIV+DH CSGETCTYYQIGDAFVCEKTG+VHVCDDTCREVIMDPNDEQLVC ISGHCFD+LLLPD MEPD EQQQAG TDEAEPFMGSGRFA
Subjt:  KSSRGLTDKIVIDHNCSGETCTYYQIGDAFVCEKTGVVHVCDDTCREVIMDPNDEQLVCRISGHCFDTLLLPDCMEPDPEQQQAGATDEAEPFMGSGRFA

Query:  RAYLLGYNCADEAELEATLRFC
        RAYLLGYNCADEAELEATLRFC
Subjt:  RAYLLGYNCADEAELEATLRFC

XP_011653768.1 F-box protein SKIP31 isoform X1 [Cucumis sativus]1.5e-17293.17Show/hide
Query:  MSIPDEEDEFLAHFLESEVLSEVSDKEEGNAEEEPKPKRARIEQINPNEQREVASVTTSSSQSKGVVPGRIETGIFSKIPPEIFRHILKFLSSEDLISCS
        M+IPDE+DEFLA FLESEVLSEVSDKEEGN +EEPKPKRARIEQI+PNEQREV SVT+SSSQSKGVVPGRIE+GIFSKIPPE+FRHILKFLSSEDLISCS
Subjt:  MSIPDEEDEFLAHFLESEVLSEVSDKEEGNAEEEPKPKRARIEQINPNEQREVASVTTSSSQSKGVVPGRIETGIFSKIPPEIFRHILKFLSSEDLISCS

Query:  LVCRFLNSVASDESLWRRLYCLRWGLLPATKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKQYYIQMQAAKRSQAPLPSQVQDDQIILDRTVADQVSTW
        LVCRFLNS ASDESLWRRLYCLRWG+LP TKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFK+YYIQMQAAKRSQAPLPSQVQDDQIILDRT+ADQVSTW
Subjt:  LVCRFLNSVASDESLWRRLYCLRWGLLPATKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKQYYIQMQAAKRSQAPLPSQVQDDQIILDRTVADQVSTW

Query:  KSSRGLTDKIVIDHNCSGETCTYYQIGDAFVCEKTGVVHVCDDTCREVIMDPNDEQLVCRISGHCFDTLLLPDCMEPDPEQQQAGATDEAEPFMGSGRFA
        KSSRGLTDKIV+DH CSGETCTYYQIGDAFVCEKTG+VHVCDDTCREVIMDPNDEQLVC ISGHCFDTLLLPD MEPD EQQQAG TDEAEPFMGSGRFA
Subjt:  KSSRGLTDKIVIDHNCSGETCTYYQIGDAFVCEKTGVVHVCDDTCREVIMDPNDEQLVCRISGHCFDTLLLPDCMEPDPEQQQAGATDEAEPFMGSGRFA

Query:  RAYLLGYNCADEAELEATLRFC
        RAYLLGYNCADEAELEATLRFC
Subjt:  RAYLLGYNCADEAELEATLRFC

XP_023525836.1 F-box protein SKIP31-like [Cucurbita pepo subsp. pepo]1.6e-17193.21Show/hide
Query:  MSIPDEEDEFLAHFLESEVLSEVSDKEEGNAEEEPKPKRARIEQINPNEQREVASVTTSSSQSKGVVPGRIETGIFSKIPPEIFRHILKFLSSEDLISCS
        MSIPDEEDEFLA F+ESEVLSEVSDKEEGN EEEPKPKRARIEQINPNEQREVASVTTSSSQSKGVVPGRIETGIFSK+PPE+FRHILKFLSSEDL+SCS
Subjt:  MSIPDEEDEFLAHFLESEVLSEVSDKEEGNAEEEPKPKRARIEQINPNEQREVASVTTSSSQSKGVVPGRIETGIFSKIPPEIFRHILKFLSSEDLISCS

Query:  LVCRFLNSVASDESLWRRLYCLRWGLLPATKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKQYYIQMQAAKRSQAPLPSQVQDDQIILDRTVADQVSTW
        LVCRFLNSVASDESLWRRLYCLRWGL+PATKKLRQCPWKKLYIQRD EDMTQLVRDCSSEFK+YYIQMQAAKRSQAPLPSQVQDDQIILDRTVADQVS+W
Subjt:  LVCRFLNSVASDESLWRRLYCLRWGLLPATKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKQYYIQMQAAKRSQAPLPSQVQDDQIILDRTVADQVSTW

Query:  KSSRGLTDKIVIDHNCSGETCTYYQIGDAFVCEKTGVVHVCDDTCREVIMDPNDEQLVCRISGHCFDTLLLPDCMEPDPEQQQAGATD--EAEPFMGSGR
        KSS+GL DKIVIDH CSGETCTYYQIGDAFVCEKTG+VHVCDDTCREVIMDP+DEQLVCRISGHCFD LLLPD MEPD EQQ AG TD  EAEPFMGSGR
Subjt:  KSSRGLTDKIVIDHNCSGETCTYYQIGDAFVCEKTGVVHVCDDTCREVIMDPNDEQLVCRISGHCFDTLLLPDCMEPDPEQQQAGATD--EAEPFMGSGR

Query:  FARAYLLGYNCADEAELEATLRFC
        FARAYLLGYNCADEAELEATLRFC
Subjt:  FARAYLLGYNCADEAELEATLRFC

XP_038896910.1 F-box protein SKIP31 isoform X1 [Benincasa hispida]3.9e-17394.1Show/hide
Query:  MSIPDEEDEFLAHFLESEVLSEVSDKEEGNAEEEPKPKRARIEQINPNEQREVASVTTSSSQSKGVVPGRIETGIFSKIPPEIFRHILKFLSSEDLISCS
        M+IPDEEDEFLA FLESEVLSEVSDKEEGNA+EEPK KRARIEQI+PNEQREV SVT SSSQSKGVVPGRIETGIFSKIPPE+FRHILKFLSSEDL+SCS
Subjt:  MSIPDEEDEFLAHFLESEVLSEVSDKEEGNAEEEPKPKRARIEQINPNEQREVASVTTSSSQSKGVVPGRIETGIFSKIPPEIFRHILKFLSSEDLISCS

Query:  LVCRFLNSVASDESLWRRLYCLRWGLLPATKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKQYYIQMQAAKRSQAPLPSQVQDDQIILDRTVADQVSTW
        LVCRFLNSVASDESLW RLYCLRWGLLP TKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFK+YYIQMQAAKRSQAPLPSQVQDDQIILDRTVADQVSTW
Subjt:  LVCRFLNSVASDESLWRRLYCLRWGLLPATKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKQYYIQMQAAKRSQAPLPSQVQDDQIILDRTVADQVSTW

Query:  KSSRGLTDKIVIDHNCSGETCTYYQIGDAFVCEKTGVVHVCDDTCREVIMDPNDEQLVCRISGHCFDTLLLPDCMEPDPEQQQAGATDEAEPFMGSGRFA
        KSSRGLTDKIVIDH CSGETCTYYQIGDAFVCEKTG+VHVCDDTCREVIMDPNDEQLVCRISGHCFDTLLLPD MEPD EQQQ G TDEAEPFMGSGRFA
Subjt:  KSSRGLTDKIVIDHNCSGETCTYYQIGDAFVCEKTGVVHVCDDTCREVIMDPNDEQLVCRISGHCFDTLLLPDCMEPDPEQQQAGATDEAEPFMGSGRFA

Query:  RAYLLGYNCADEAELEATLRFC
        RAYLLGYNC DEAELEATLRFC
Subjt:  RAYLLGYNCADEAELEATLRFC

XP_038896911.1 F-box protein SKIP31 isoform X2 [Benincasa hispida]1.4e-17093.48Show/hide
Query:  MSIPDEEDEFLAHFLESEVLSEVSDKEEGNAEEEPKPKRARIEQINPNEQREVASVTTSSSQSKGVVPGRIETGIFSKIPPEIFRHILKFLSSEDLISCS
        M+IPDEEDEFLA FLESEVLSEVSDKEEGNA+EEPK KRARIEQI+PNEQREV SVT SSSQSKGVVPGRIETGIFSKIPPE+FRHILKFLSSEDL+SCS
Subjt:  MSIPDEEDEFLAHFLESEVLSEVSDKEEGNAEEEPKPKRARIEQINPNEQREVASVTTSSSQSKGVVPGRIETGIFSKIPPEIFRHILKFLSSEDLISCS

Query:  LVCRFLNSVASDESLWRRLYCLRWGLLPATKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKQYYIQMQAAKRSQAPLPSQVQDDQIILDRTVADQVSTW
        LVCRFLNSVASDESLW RLYCLRWGLLP TKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFK+YYIQMQAAKRSQAPLPSQVQDDQIILDRTVADQVSTW
Subjt:  LVCRFLNSVASDESLWRRLYCLRWGLLPATKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKQYYIQMQAAKRSQAPLPSQVQDDQIILDRTVADQVSTW

Query:  KSSRGLTDKIVIDHNCSGETCTYYQIGDAFVCEKTGVVHVCDDTCREVIMDPNDEQLVCRISGHCFDTLLLPDCMEPDPEQQQAGATDEAEPFMGSGRFA
        KSSRGLTDKIVIDH CSGETCTYYQIGDAFVCEKTG+VHVCDDTCREVIMDPNDEQLVCRISGHCFDTLLLPD MEPD   QQ G TDEAEPFMGSGRFA
Subjt:  KSSRGLTDKIVIDHNCSGETCTYYQIGDAFVCEKTGVVHVCDDTCREVIMDPNDEQLVCRISGHCFDTLLLPDCMEPDPEQQQAGATDEAEPFMGSGRFA

Query:  RAYLLGYNCADEAELEATLRFC
        RAYLLGYNC DEAELEATLRFC
Subjt:  RAYLLGYNCADEAELEATLRFC

TrEMBL top hitse value%identityAlignment
A0A1S3B9V0 F-box protein SKIP31 isoform X14.7e-17292.55Show/hide
Query:  MSIPDEEDEFLAHFLESEVLSEVSDKEEGNAEEEPKPKRARIEQINPNEQREVASVTTSSSQSKGVVPGRIETGIFSKIPPEIFRHILKFLSSEDLISCS
        M+IPDE+DEFLA FLESEVLSEVSDKEEGN +EEPKPKRARIEQI+PNEQREV SVT+SSSQSKGVVPGRIE+GIFSKIPPE+FRHILKFLSSEDLISCS
Subjt:  MSIPDEEDEFLAHFLESEVLSEVSDKEEGNAEEEPKPKRARIEQINPNEQREVASVTTSSSQSKGVVPGRIETGIFSKIPPEIFRHILKFLSSEDLISCS

Query:  LVCRFLNSVASDESLWRRLYCLRWGLLPATKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKQYYIQMQAAKRSQAPLPSQVQDDQIILDRTVADQVSTW
        LVCRFLNS ASDESLWRRLYCLRWG+LP +KKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFK+YYIQMQAAKRSQAPLPSQVQDDQIILDRT+ADQVSTW
Subjt:  LVCRFLNSVASDESLWRRLYCLRWGLLPATKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKQYYIQMQAAKRSQAPLPSQVQDDQIILDRTVADQVSTW

Query:  KSSRGLTDKIVIDHNCSGETCTYYQIGDAFVCEKTGVVHVCDDTCREVIMDPNDEQLVCRISGHCFDTLLLPDCMEPDPEQQQAGATDEAEPFMGSGRFA
        KSSRGLTDKIV+DH CSGETCTYYQIGDAFVCEKTG+VHVCDDTCREVIMDPNDEQLVC ISGHCFD+LLLPD MEPD EQQQAG TDEAEPFMGSGRFA
Subjt:  KSSRGLTDKIVIDHNCSGETCTYYQIGDAFVCEKTGVVHVCDDTCREVIMDPNDEQLVCRISGHCFDTLLLPDCMEPDPEQQQAGATDEAEPFMGSGRFA

Query:  RAYLLGYNCADEAELEATLRFC
        RAYLLGYNCADEAELEATLRFC
Subjt:  RAYLLGYNCADEAELEATLRFC

A0A1S3B9Y3 F-box protein SKIP31 isoform X21.3e-16991.93Show/hide
Query:  MSIPDEEDEFLAHFLESEVLSEVSDKEEGNAEEEPKPKRARIEQINPNEQREVASVTTSSSQSKGVVPGRIETGIFSKIPPEIFRHILKFLSSEDLISCS
        M+IPDE+DEFLA FLESEVLSEVSDKEEGN +EEPKPKRARIEQI+PNEQREV SVT+SSSQSKGVVPGRIE+GIFSKIPPE+FRHILKFLSSEDLISCS
Subjt:  MSIPDEEDEFLAHFLESEVLSEVSDKEEGNAEEEPKPKRARIEQINPNEQREVASVTTSSSQSKGVVPGRIETGIFSKIPPEIFRHILKFLSSEDLISCS

Query:  LVCRFLNSVASDESLWRRLYCLRWGLLPATKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKQYYIQMQAAKRSQAPLPSQVQDDQIILDRTVADQVSTW
        LVCRFLNS ASDESLWRRLYCLRWG+LP +KKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFK+YYIQMQAAKRSQAPLPS  QDDQIILDRT+ADQVSTW
Subjt:  LVCRFLNSVASDESLWRRLYCLRWGLLPATKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKQYYIQMQAAKRSQAPLPSQVQDDQIILDRTVADQVSTW

Query:  KSSRGLTDKIVIDHNCSGETCTYYQIGDAFVCEKTGVVHVCDDTCREVIMDPNDEQLVCRISGHCFDTLLLPDCMEPDPEQQQAGATDEAEPFMGSGRFA
        KSSRGLTDKIV+DH CSGETCTYYQIGDAFVCEKTG+VHVCDDTCREVIMDPNDEQLVC ISGHCFD+LLLPD MEPD EQQQAG TDEAEPFMGSGRFA
Subjt:  KSSRGLTDKIVIDHNCSGETCTYYQIGDAFVCEKTGVVHVCDDTCREVIMDPNDEQLVCRISGHCFDTLLLPDCMEPDPEQQQAGATDEAEPFMGSGRFA

Query:  RAYLLGYNCADEAELEATLRFC
        RAYLLGYNCADEAELEATLRFC
Subjt:  RAYLLGYNCADEAELEATLRFC

A0A6J1F8E8 F-box protein SKIP31-like1.1e-16891.67Show/hide
Query:  MSIPDEEDEFLAHFLESEVLSEVSDKEEGNAEEEPKPKRARIEQINPNEQREVASVTTSSSQSKGVVPGRIETGIFSKIPPEIFRHILKFLSSEDLISCS
        M+I DEEDE LA FLE+EVLSEVSDKEEGNA+EEP+PKRARIEQINPNEQREVASVTTSSSQ  GVVPGRI+TGIFS+IP E+FRHILKFLSSEDLISCS
Subjt:  MSIPDEEDEFLAHFLESEVLSEVSDKEEGNAEEEPKPKRARIEQINPNEQREVASVTTSSSQSKGVVPGRIETGIFSKIPPEIFRHILKFLSSEDLISCS

Query:  LVCRFLNSVASDESLWRRLYCLRWGLLPATKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKQYYIQMQAAKRSQAPLPSQVQDDQIILDRTVADQVSTW
        LVCRFLNSVASDESLWRRLYCLRWGL+P TKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFK+YYIQMQAAKRSQAPLPSQVQDDQIILDRTVADQVSTW
Subjt:  LVCRFLNSVASDESLWRRLYCLRWGLLPATKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKQYYIQMQAAKRSQAPLPSQVQDDQIILDRTVADQVSTW

Query:  KSSRGLTDKIVIDHNCSGETCTYYQIGDAFVCEKTGVVHVCDDTCREVIMDPNDEQLVCRISGHCFDTLLLPDCMEPDPEQQQAGATDEA--EPFMGSGR
        KSSRGLTDKIVIDH CSGETCTYYQ+GDAFVCEKTG+VHVCDDTCREV+MDPNDEQLVCRISGHCFDTLL PD MEPD E QQAG TDEA  EPFMGSGR
Subjt:  KSSRGLTDKIVIDHNCSGETCTYYQIGDAFVCEKTGVVHVCDDTCREVIMDPNDEQLVCRISGHCFDTLLLPDCMEPDPEQQQAGATDEA--EPFMGSGR

Query:  FARAYLLGYNCADEAELEATLRFC
        FARAYLLGYNCADEAELEATLRFC
Subjt:  FARAYLLGYNCADEAELEATLRFC

A0A6J1FLL4 F-box protein SKIP31-like3.7e-16992.02Show/hide
Query:  MSIPDEEDEFLAHFLESEVLSEVSDKEEGNAEEEPKPKRARIEQINPNEQREVASVTTSS--SQSKGVVPGRIETGIFSKIPPEIFRHILKFLSSEDLIS
        MSIPDEEDEFLA F+ESEVLSEVSDKEEGN EEEPKPKRARIEQINPNEQREVASVTTSS  SQSKGVVPGRIETGIFSK+PPE+FRHILKFLSSEDL+S
Subjt:  MSIPDEEDEFLAHFLESEVLSEVSDKEEGNAEEEPKPKRARIEQINPNEQREVASVTTSS--SQSKGVVPGRIETGIFSKIPPEIFRHILKFLSSEDLIS

Query:  CSLVCRFLNSVASDESLWRRLYCLRWGLLPATKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKQYYIQMQAAKRSQAPLPSQVQDDQIILDRTVADQVS
        CSLVCRFLNSVASDESLWRRLYCLRWGL+P TKKLRQCPWKKLYIQRD EDMTQLVRDCSSEFK+YYIQMQAAKRSQAPLPSQVQDDQIILDRTVADQVS
Subjt:  CSLVCRFLNSVASDESLWRRLYCLRWGLLPATKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKQYYIQMQAAKRSQAPLPSQVQDDQIILDRTVADQVS

Query:  TWKSSRGLTDKIVIDHNCSGETCTYYQIGDAFVCEKTGVVHVCDDTCREVIMDPNDEQLVCRISGHCFDTLLLPDCMEPDPEQQQAGATD--EAEPFMGS
        +WKSS+GL DKIVIDH CSGETCTYYQIGDAFVCEKTG+VHVCDDTCREVIMDP+DEQLVCRISGHCFD LLLPD  EPD EQQ AG TD  EAEPFMGS
Subjt:  TWKSSRGLTDKIVIDHNCSGETCTYYQIGDAFVCEKTGVVHVCDDTCREVIMDPNDEQLVCRISGHCFDTLLLPDCMEPDPEQQQAGATD--EAEPFMGS

Query:  GRFARAYLLGYNCADEAELEATLRFC
        GRFARAYLLGYNCADEAELEATLRFC
Subjt:  GRFARAYLLGYNCADEAELEATLRFC

A0A6J1ISU8 F-box protein SKIP31-like1.1e-16892.02Show/hide
Query:  MSIPDEEDEFLAHFLESEVLSEVSDKEEGNAEEEPKPKRARIEQINPNEQREVASVTT--SSSQSKGVVPGRIETGIFSKIPPEIFRHILKFLSSEDLIS
        MSIPDEEDEFLA F+ESEVLSEVSDKEEGN EEEPKPKRARIEQINPNEQREVASVTT  S SQSKGVVPGRIETGIFSK+P E+FRHILKFLSSEDL+S
Subjt:  MSIPDEEDEFLAHFLESEVLSEVSDKEEGNAEEEPKPKRARIEQINPNEQREVASVTT--SSSQSKGVVPGRIETGIFSKIPPEIFRHILKFLSSEDLIS

Query:  CSLVCRFLNSVASDESLWRRLYCLRWGLLPATKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKQYYIQMQAAKRSQAPLPSQVQDDQIILDRTVADQVS
        CSLVCRFLNSVASDESLWRRLYCLRWGL+PATKKLRQCPWKKLYIQRD EDMTQLVRDCSSEFK+YYIQMQAAKRSQAPLPSQVQDDQIILDRTVADQVS
Subjt:  CSLVCRFLNSVASDESLWRRLYCLRWGLLPATKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKQYYIQMQAAKRSQAPLPSQVQDDQIILDRTVADQVS

Query:  TWKSSRGLTDKIVIDHNCSGETCTYYQIGDAFVCEKTGVVHVCDDTCREVIMDPNDEQLVCRISGHCFDTLLLPDCMEPDPEQQQAGATD--EAEPFMGS
        +WKSS+GL DKIVIDH CSGETCTYYQIGDAFVCEKTG+VHVCDDTCREVIMDP+DEQLVCRISGHCFD LLLPD MEPD EQQ AG TD  EAEPFMGS
Subjt:  TWKSSRGLTDKIVIDHNCSGETCTYYQIGDAFVCEKTGVVHVCDDTCREVIMDPNDEQLVCRISGHCFDTLLLPDCMEPDPEQQQAGATD--EAEPFMGS

Query:  GRFARAYLLGYNCADEAELEATLRFC
        GRFARAYLLGYNCADEAELEATLRFC
Subjt:  GRFARAYLLGYNCADEAELEATLRFC

SwissProt top hitse value%identityAlignment
Q9FHK0 F-box protein SKIP312.5e-9858.51Show/hide
Query:  MSIPDEEDEFLAHFLESEVLSEVSDKEEGNAEEEPKPKRARIEQINPNEQREVASVTTSSSQSKGVVPGRIETGIFSKIPPEIFRHILKFLSSEDLISCS
        MS+ DEEDE  A FLESEV S V DKEE    +EP+ KR RIE+       +      + ++ K     RIE+G+F+ +P E+FRHILKFLSSEDL+SCS
Subjt:  MSIPDEEDEFLAHFLESEVLSEVSDKEEGNAEEEPKPKRARIEQINPNEQREVASVTTSSSQSKGVVPGRIETGIFSKIPPEIFRHILKFLSSEDLISCS

Query:  LVCRFLNSVASDESLWRRLYCLRWGLLPATKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKQYYIQMQAAKRSQAPLPSQVQDDQIILDRTVADQVSTW
        LVC+FLN  A+DESLWRRLYC+RWGL   ++KLR+  WKKLYI RDE+DM +LVR C S+FK+YY+ MQAAKRSQAPLPSQ+ DD+IILD TV +QVS W
Subjt:  LVCRFLNSVASDESLWRRLYCLRWGLLPATKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKQYYIQMQAAKRSQAPLPSQVQDDQIILDRTVADQVSTW

Query:  KSSRGLTDKIVIDHNCSGETCTYYQIGDAFVCEKTGVVHVCDDTCREVIMDPNDEQLVCRISGHCFDTLLLPDCMEPDPEQ-QQAGATDEAEPFMGSGRF
        K S+GLTDK V  H C G  C+Y+QI D F+C++TG VHVCDD C+EVI+ P  + +VC ISG C DTLL+    EPD +   +  A  EAE F    R 
Subjt:  KSSRGLTDKIVIDHNCSGETCTYYQIGDAFVCEKTGVVHVCDDTCREVIMDPNDEQLVCRISGHCFDTLLLPDCMEPDPEQ-QQAGATDEAEPFMGSGRF

Query:  ARAYLLGYNCADEAELEATLRFC
        ARA+ LGYNC DE ELE TLRFC
Subjt:  ARAYLLGYNCADEAELEATLRFC

Arabidopsis top hitse value%identityAlignment
AT5G45360.1 F-box family protein1.8e-9958.51Show/hide
Query:  MSIPDEEDEFLAHFLESEVLSEVSDKEEGNAEEEPKPKRARIEQINPNEQREVASVTTSSSQSKGVVPGRIETGIFSKIPPEIFRHILKFLSSEDLISCS
        MS+ DEEDE  A FLESEV S V DKEE    +EP+ KR RIE+       +      + ++ K     RIE+G+F+ +P E+FRHILKFLSSEDL+SCS
Subjt:  MSIPDEEDEFLAHFLESEVLSEVSDKEEGNAEEEPKPKRARIEQINPNEQREVASVTTSSSQSKGVVPGRIETGIFSKIPPEIFRHILKFLSSEDLISCS

Query:  LVCRFLNSVASDESLWRRLYCLRWGLLPATKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKQYYIQMQAAKRSQAPLPSQVQDDQIILDRTVADQVSTW
        LVC+FLN  A+DESLWRRLYC+RWGL   ++KLR+  WKKLYI RDE+DM +LVR C S+FK+YY+ MQAAKRSQAPLPSQ+ DD+IILD TV +QVS W
Subjt:  LVCRFLNSVASDESLWRRLYCLRWGLLPATKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKQYYIQMQAAKRSQAPLPSQVQDDQIILDRTVADQVSTW

Query:  KSSRGLTDKIVIDHNCSGETCTYYQIGDAFVCEKTGVVHVCDDTCREVIMDPNDEQLVCRISGHCFDTLLLPDCMEPDPEQ-QQAGATDEAEPFMGSGRF
        K S+GLTDK V  H C G  C+Y+QI D F+C++TG VHVCDD C+EVI+ P  + +VC ISG C DTLL+    EPD +   +  A  EAE F    R 
Subjt:  KSSRGLTDKIVIDHNCSGETCTYYQIGDAFVCEKTGVVHVCDDTCREVIMDPNDEQLVCRISGHCFDTLLLPDCMEPDPEQ-QQAGATDEAEPFMGSGRF

Query:  ARAYLLGYNCADEAELEATLRFC
        ARA+ LGYNC DE ELE TLRFC
Subjt:  ARAYLLGYNCADEAELEATLRFC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCATTCCAGACGAAGAAGACGAGTTCTTGGCTCACTTCCTCGAATCAGAGGTCCTCTCGGAGGTCTCCGATAAGGAGGAAGGGAACGCGGAGGAAGAACCAAAACC
TAAGAGAGCTCGAATCGAGCAGATTAACCCTAATGAACAAAGAGAGGTAGCTTCCGTCACTACTTCGTCCTCTCAATCCAAGGGCGTCGTTCCTGGGAGGATTGAGACTG
GAATTTTCAGTAAAATTCCTCCGGAGATCTTCCGCCATATCCTCAAGTTTCTCTCATCAGAGGATCTGATTTCTTGTTCACTGGTTTGTCGGTTTTTAAATTCTGTGGCG
TCTGATGAATCATTATGGCGAAGATTATATTGTCTACGATGGGGTCTGTTGCCTGCAACCAAGAAGTTGCGCCAATGTCCTTGGAAAAAACTTTATATTCAGCGTGACGA
AGAGGACATGACTCAACTGGTTCGAGATTGCTCTTCTGAGTTTAAACAGTACTACATCCAAATGCAAGCAGCAAAAAGAAGTCAAGCTCCTCTTCCTTCTCAGGTGCAGG
ATGACCAAATAATTCTTGATAGGACTGTAGCTGATCAAGTATCTACATGGAAAAGCAGCAGGGGCTTGACCGACAAGATAGTCATAGATCACAATTGTTCTGGAGAAACA
TGTACATATTACCAAATTGGGGATGCATTCGTATGTGAAAAGACTGGAGTTGTTCATGTGTGTGATGACACGTGCAGAGAAGTCATTATGGATCCCAACGACGAACAGCT
TGTCTGCAGAATATCTGGACACTGCTTTGATACTCTGCTTTTGCCAGATTGTATGGAACCAGATCCTGAACAGCAACAAGCCGGTGCAACCGATGAGGCGGAACCATTCA
TGGGTTCAGGCCGTTTTGCTCGAGCTTACTTGTTGGGATACAACTGTGCTGATGAGGCAGAGCTAGAAGCTACTTTGAGGTTTTGCTGA
mRNA sequenceShow/hide mRNA sequence
TTCGAAGAGTCTGGCCGCAAGATGCACGCGTTGTGCAGTTGTGGAGAATCCTCTCCTGGTATGGTTCCTGTGATTTCGGGTGGGTTATTGGGGGTCGGTGTCGTCATTCT
AAAGGCCGGAACTGCTGGCTGCCAGCTCCGGTCACCGGCCGACGGAGATTATTTATCGGTCTATTCCGTGTTCACAATCCGATCGTTGCAGGAGTTCGAAAATCCCATTG
CTTGATGTGAAATGTCCATTCCAGACGAAGAAGACGAGTTCTTGGCTCACTTCCTCGAATCAGAGGTCCTCTCGGAGGTCTCCGATAAGGAGGAAGGGAACGCGGAGGAA
GAACCAAAACCTAAGAGAGCTCGAATCGAGCAGATTAACCCTAATGAACAAAGAGAGGTAGCTTCCGTCACTACTTCGTCCTCTCAATCCAAGGGCGTCGTTCCTGGGAG
GATTGAGACTGGAATTTTCAGTAAAATTCCTCCGGAGATCTTCCGCCATATCCTCAAGTTTCTCTCATCAGAGGATCTGATTTCTTGTTCACTGGTTTGTCGGTTTTTAA
ATTCTGTGGCGTCTGATGAATCATTATGGCGAAGATTATATTGTCTACGATGGGGTCTGTTGCCTGCAACCAAGAAGTTGCGCCAATGTCCTTGGAAAAAACTTTATATT
CAGCGTGACGAAGAGGACATGACTCAACTGGTTCGAGATTGCTCTTCTGAGTTTAAACAGTACTACATCCAAATGCAAGCAGCAAAAAGAAGTCAAGCTCCTCTTCCTTC
TCAGGTGCAGGATGACCAAATAATTCTTGATAGGACTGTAGCTGATCAAGTATCTACATGGAAAAGCAGCAGGGGCTTGACCGACAAGATAGTCATAGATCACAATTGTT
CTGGAGAAACATGTACATATTACCAAATTGGGGATGCATTCGTATGTGAAAAGACTGGAGTTGTTCATGTGTGTGATGACACGTGCAGAGAAGTCATTATGGATCCCAAC
GACGAACAGCTTGTCTGCAGAATATCTGGACACTGCTTTGATACTCTGCTTTTGCCAGATTGTATGGAACCAGATCCTGAACAGCAACAAGCCGGTGCAACCGATGAGGC
GGAACCATTCATGGGTTCAGGCCGTTTTGCTCGAGCTTACTTGTTGGGATACAACTGTGCTGATGAGGCAGAGCTAGAAGCTACTTTGAGGTTTTGCTGATTCAGAACTG
GAATTAGTTTGGGTGGAGCCTTTATTTGATTGAAACTCCTGTTGGCATCCAAATTTTTGGAGAGAATACTGCCCTCTTTGTTTTTATTGGCTTACATTAGTTAATTTCAT
GTGGAGTAGAAGTTTGTTAATTAGGTACAAAATATATATATAAAATATAATATATATAAGTTTCTTAACATATTTTGCAACCTGAGAGAGTTACCTA
Protein sequenceShow/hide protein sequence
MSIPDEEDEFLAHFLESEVLSEVSDKEEGNAEEEPKPKRARIEQINPNEQREVASVTTSSSQSKGVVPGRIETGIFSKIPPEIFRHILKFLSSEDLISCSLVCRFLNSVA
SDESLWRRLYCLRWGLLPATKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKQYYIQMQAAKRSQAPLPSQVQDDQIILDRTVADQVSTWKSSRGLTDKIVIDHNCSGET
CTYYQIGDAFVCEKTGVVHVCDDTCREVIMDPNDEQLVCRISGHCFDTLLLPDCMEPDPEQQQAGATDEAEPFMGSGRFARAYLLGYNCADEAELEATLRFC