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Tan0003678 (gene) of Snake gourd v1 genome

Gene IDTan0003678
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionChalcone synthase
Genome locationLG11:10413186..10414623
RNA-Seq ExpressionTan0003678
SyntenyTan0003678
Gene Ontology termsGO:0009058 - biosynthetic process (biological process)
GO:0050896 - response to stimulus (biological process)
GO:0016747 - transferase activity, transferring acyl groups other than amino-acyl groups (molecular function)
InterPro domainsIPR001099 - Chalcone/stilbene synthase, N-terminal
IPR011141 - Polyketide synthase, type III
IPR016039 - Thiolase-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAD3640782.1 hypothetical protein E3N88_30005 [Mikania micrantha]1.3e-2144.74Show/hide
Query:  ATLLGIGTAVPPNFLYQTQYPDFYFRVTNSQHMTHSIRKFNRIWPDCQLSKLL----SVGRFVLYQHGCNAAGTALGLAKDVAENNVNNNINARVLVVAV
        A +L IGTA P N +YQ  YPD+YFR+T S+HM H   KF R+  D QL+KLL    SV R+++YQ GC A GT L LAKD+AENN     +ARVLVV  
Subjt:  ATLLGIGTAVPPNFLYQTQYPDFYFRVTNSQHMTHSIRKFNRIWPDCQLSKLL----SVGRFVLYQHGCNAAGTALGLAKDVAENNVNNNINARVLVVAV

Query:  DMMSMYFHAPSEKRKKSMREGKSSTGEGLEWGALVALGPGLTLETLILHSVS
        ++ ++ F  PSE    S+  G++  G+G     ++   P L++E  +   VS
Subjt:  DMMSMYFHAPSEKRKKSMREGKSSTGEGLEWGALVALGPGLTLETLILHSVS

KAF2292736.1 hypothetical protein GH714_027727 [Hevea brasiliensis]2.1e-1641.61Show/hide
Query:  ATLLGIGTAVPPNFLYQTQYPDFYFRVTNSQHMTHSIRKFNRI---WPDCQLSKLLSV-------GRFVLYQHGCNAAGTALGLAKDVAENNV----NNN
        AT+L IGTA P N + Q  YPDFYFR+T S+HMT    KF RI   +    +S   S+       G  +L Q     A  +L   K  A  +V     N 
Subjt:  ATLLGIGTAVPPNFLYQTQYPDFYFRVTNSQHMTHSIRKFNRI---WPDCQLSKLLSV-------GRFVLYQHGCNAAGTALGLAKDVAENNV----NNN

Query:  INARVLVVAVDMMSMYFHAPSEKRKKSMREGKSSTGEGLEWGALVALGPGLTLETLILHSV
         +A VL +             E RKKS+ EGK +TGEGLEWG L   GPGLT+ET++LHS+
Subjt:  INARVLVVAVDMMSMYFHAPSEKRKKSMREGKSSTGEGLEWGALVALGPGLTLETLILHSV

KAG6581142.1 Chalcone synthase 6-4, partial [Cucurbita argyrosperma subsp. sororia]3.6e-1638.16Show/hide
Query:  NKRATLLGIGTAVPPNFLYQTQYPDFYFRVTNSQHMTHSIRKFNRIWPDCQLSKLLSVGRFVLYQHGCNAAGTALGLAKDVAENNVNNNINARVLVVAVD
        N   TL  IGTAVPPN + Q+ YPDFYFRVTNS+HM     KF +     +  K +   R +L ++G                     N+++  +   +D
Subjt:  NKRATLLGIGTAVPPNFLYQTQYPDFYFRVTNSQHMTHSIRKFNRIWPDCQLSKLLSVGRFVLYQHGCNAAGTALGLAKDVAENNVNNNINARVLVVAVD

Query:  MMSMYFHAPSEKRKKSMREGKSSTGEGLEWGALVALGPGLTLETLILHSVSM
         +          RK S+ EG S+ GEGLEWG L+  GPGLTLET++L+SV++
Subjt:  MMSMYFHAPSEKRKKSMREGKSSTGEGLEWGALVALGPGLTLETLILHSVSM

PPS04958.1 hypothetical protein GOBAR_AA15712 [Gossypium barbadense]2.9e-2134.13Show/hide
Query:  EEGNESCEYNNNNKRATLLGIGTAVPPNFLYQTQYPDFYFRVTNSQHMTHSIRKFNRI------------------------------------------
        E   E+C      K AT+L IGT  PPN  YQ  YPDFYFRVT S+HMT    KF RI                                          
Subjt:  EEGNESCEYNNNNKRATLLGIGTAVPPNFLYQTQYPDFYFRVTNSQHMTHSIRKFNRI------------------------------------------

Query:  ---------------W----------------------PDCQLSKLL----SVGRFVLYQHGCNAAGTALGLAKDVAENNVNNNINARVLVVAVDMMSMY
                       W                       D +L+KL+    S+ RF++Y  GC A  TAL LAKD+ ENNV   +N   L  +  ++S Y
Subjt:  ---------------W----------------------PDCQLSKLL----SVGRFVLYQHGCNAAGTALGLAKDVAENNVNNNINARVLVVAVDMMSMY

Query:  --FHAPS------EKRKKSMREGKSSTGEGLEWGALVALGPGLTLETLILHS
             PS      E RK S+ EGK++TGEGLEWG L  +GPGLT+ETL+L +
Subjt:  --FHAPS------EKRKKSMREGKSSTGEGLEWGALVALGPGLTLETLILHS

PQM37249.1 hypothetical protein Pyn_40808 [Prunus yedoensis var. nudiflora]2.8e-1628.62Show/hide
Query:  ATLLGIGTAVPPNFLYQTQYPDFYFRVTNSQHMTHSIRKFNRI---------------------------------------------------------
        A +L IGTA P N  YQ  YPDF FRVTNS HMT    KF RI                                                         
Subjt:  ATLLGIGTAVPPNFLYQTQYPDFYFRVTNSQHMTHSIRKFNRI---------------------------------------------------------

Query:  W----------------------PDCQLSKLL----SVGRFVLYQHGCNAAGTALGLAKDVAENNVNNNINARVLVVAVDMMSMYFHAPSEK--------
        W                       D QL KLL    SV RF++YQ GC A GTAL LAKDVAENN      ARVLVV  ++ +  F AP+E         
Subjt:  W----------------------PDCQLSKLL----SVGRFVLYQHGCNAAGTALGLAKDVAENNVNNNINARVLVVAVDMMSMYFHAPSEK--------

Query:  ---------------------------------------------------------------------------------------RKKSMREGKSSTG
                                                                                               RKKSM EGK++TG
Subjt:  ---------------------------------------------------------------------------------------RKKSMREGKSSTG

Query:  EGLEWGALVALGPGLTLETLILHSV
        EGLEWG L+ +GPGLT+ET++L SV
Subjt:  EGLEWGALVALGPGLTLETLILHSV

TrEMBL top hitse value%identityAlignment
A0A0R0IQ64 Chalcone synthase1.0e-1638.99Show/hide
Query:  ATLLGIGTAVPPNFLYQTQYPDFYFRVTNSQHMTHSIRKFNRI-------------------------------WPDCQLSKLL----SVGRFVLYQHGC
        AT++ IGTA PPN + Q+ YPD+YFR+TNS+HMT    KF R+                                 D QL+KLL    SV R+++YQ GC
Subjt:  ATLLGIGTAVPPNFLYQTQYPDFYFRVTNSQHMTHSIRKFNRI-------------------------------WPDCQLSKLL----SVGRFVLYQHGC

Query:  NAAGTALGLAKDVAENNVNNNINARVLVVAVDMMSMYFHAPSEKRKKSMREGKSSTGEG
         A GT L LAKD+AENN      ARVLVV  ++ ++ F  P++    S+  G++  G+G
Subjt:  NAAGTALGLAKDVAENNVNNNINARVLVVAVDMMSMYFHAPSEKRKKSMREGKSSTGEG

A0A2P5XNM3 Chal_sti_synt_N domain-containing protein1.4e-2134.13Show/hide
Query:  EEGNESCEYNNNNKRATLLGIGTAVPPNFLYQTQYPDFYFRVTNSQHMTHSIRKFNRI------------------------------------------
        E   E+C      K AT+L IGT  PPN  YQ  YPDFYFRVT S+HMT    KF RI                                          
Subjt:  EEGNESCEYNNNNKRATLLGIGTAVPPNFLYQTQYPDFYFRVTNSQHMTHSIRKFNRI------------------------------------------

Query:  ---------------W----------------------PDCQLSKLL----SVGRFVLYQHGCNAAGTALGLAKDVAENNVNNNINARVLVVAVDMMSMY
                       W                       D +L+KL+    S+ RF++Y  GC A  TAL LAKD+ ENNV   +N   L  +  ++S Y
Subjt:  ---------------W----------------------PDCQLSKLL----SVGRFVLYQHGCNAAGTALGLAKDVAENNVNNNINARVLVVAVDMMSMY

Query:  --FHAPS------EKRKKSMREGKSSTGEGLEWGALVALGPGLTLETLILHS
             PS      E RK S+ EGK++TGEGLEWG L  +GPGLT+ETL+L +
Subjt:  --FHAPS------EKRKKSMREGKSSTGEGLEWGALVALGPGLTLETLILHS

A0A5N6ML55 Uncharacterized protein6.2e-2244.74Show/hide
Query:  ATLLGIGTAVPPNFLYQTQYPDFYFRVTNSQHMTHSIRKFNRIWPDCQLSKLL----SVGRFVLYQHGCNAAGTALGLAKDVAENNVNNNINARVLVVAV
        A +L IGTA P N +YQ  YPD+YFR+T S+HM H   KF R+  D QL+KLL    SV R+++YQ GC A GT L LAKD+AENN     +ARVLVV  
Subjt:  ATLLGIGTAVPPNFLYQTQYPDFYFRVTNSQHMTHSIRKFNRIWPDCQLSKLL----SVGRFVLYQHGCNAAGTALGLAKDVAENNVNNNINARVLVVAV

Query:  DMMSMYFHAPSEKRKKSMREGKSSTGEGLEWGALVALGPGLTLETLILHSVS
        ++ ++ F  PSE    S+  G++  G+G     ++   P L++E  +   VS
Subjt:  DMMSMYFHAPSEKRKKSMREGKSSTGEGLEWGALVALGPGLTLETLILHSVS

A0A7C8ZII9 Chalcone synthase1.9e-1840.51Show/hide
Query:  ATLLGIGTAVPPNFLYQTQYPDFYFRVTNSQHMTHSIRKFNRIWP-----------DCQLSKLLSVGRFVLYQHGCNAAGTALGLAKDVAENNVNNNINA
        AT+L IGTA P N +YQ +YPDFYFRV N +HM     KF RI             +    KLLS  R+VL + G                    N I+A
Subjt:  ATLLGIGTAVPPNFLYQTQYPDFYFRVTNSQHMTHSIRKFNRIWP-----------DCQLSKLLSVGRFVLYQHGCNAAGTALGLAKDVAENNVNNNINA

Query:  RVLVVAVDMMSMYFHAPSEKRKKSMREGKSSTGEGLEWGALVALGPGLTLETLILHSV
         VL +             E R +S+ +GK +TGEGL+WG L+A GPGLT+ET++LHSV
Subjt:  RVLVVAVDMMSMYFHAPSEKRKKSMREGKSSTGEGLEWGALVALGPGLTLETLILHSV

M0T7I5 Uncharacterized protein1.9e-1828.38Show/hide
Query:  ATLLGIGTAVPPNFLYQTQYPDFYFRVTNSQHMTHSIRKFNRI---------------------------------------------------------
        AT+L IGTA P N +YQ +YPD+YFR+T S+H+T    KF R+                                                         
Subjt:  ATLLGIGTAVPPNFLYQTQYPDFYFRVTNSQHMTHSIRKFNRI---------------------------------------------------------

Query:  W----------------------PDCQLSKLL----SVGRFVLYQHGCNAAGTALGLAKDVAENNVNNNINARVLVVAVDMMSMYFHAPSEK--------
        W                       D QL+KLL    SV RF++YQ GC A GT L LAKD+AE    N+  ARVLVV  ++ ++ F  PSE         
Subjt:  W----------------------PDCQLSKLL----SVGRFVLYQHGCNAAGTALGLAKDVAENNVNNNINARVLVVAVDMMSMYFHAPSEK--------

Query:  ----------------------------------------------------------RKKSMREGKSSTGEGLEWGALVALGPGLTLETLILHSV
                                                                  RK+S  +GK++TGEGLEWG L   GPGLT+ET++LHS+
Subjt:  ----------------------------------------------------------RKKSMREGKSSTGEGLEWGALVALGPGLTLETLILHSV

SwissProt top hitse value%identityAlignment
O23729 Chalcone synthase 33.2e-1531.4Show/hide
Query:  ATLLGIGTAVPPNFLYQTQYPDFYFRVTNSQHMTHSIRKFNRI---------------------------------------------------------
        A +L IGT+ PPN LYQ  YPD+YFR+T S+H+T    KF R+                                                         
Subjt:  ATLLGIGTAVPPNFLYQTQYPDFYFRVTNSQHMTHSIRKFNRI---------------------------------------------------------

Query:  W----------------------PDCQLSKLL----SVGRFVLYQHGCNAAGTALGLAKDVAENNVNNNINARVLVVAVDMMSMYFHAPSEKRKKSMREG
        W                       D QL++LL    SV RF+LYQ GC A GT L LAKD+AENN      ARVLVV  ++ ++ F  PSE    S+  G
Subjt:  W----------------------PDCQLSKLL----SVGRFVLYQHGCNAAGTALGLAKDVAENNVNNNINARVLVVAVDMMSMYFHAPSEKRKKSMREG

Query:  KSSTGEG
        ++  G+G
Subjt:  KSSTGEG

O23729 Chalcone synthase 33.5e-0657.5Show/hide
Query:  EKRKKSMREGKSSTGEGLEWGALVALGPGLTLETLILHSV
        E R++S   G+++TGEGLEWG L   GPGLT+ET++L SV
Subjt:  EKRKKSMREGKSSTGEGLEWGALVALGPGLTLETLILHSV

O23730 Chalcone synthase 43.2e-1531.4Show/hide
Query:  ATLLGIGTAVPPNFLYQTQYPDFYFRVTNSQHMTHSIRKFNRI---------------------------------------------------------
        A +L IGT+ PPN LYQ  YPD+YFR+T S+H+T    KF R+                                                         
Subjt:  ATLLGIGTAVPPNFLYQTQYPDFYFRVTNSQHMTHSIRKFNRI---------------------------------------------------------

Query:  W----------------------PDCQLSKLL----SVGRFVLYQHGCNAAGTALGLAKDVAENNVNNNINARVLVVAVDMMSMYFHAPSEKRKKSMREG
        W                       D QL++LL    SV RF+LYQ GC A GT L LAKD+AENN      ARVLVV  ++ ++ F  PSE    S+  G
Subjt:  W----------------------PDCQLSKLL----SVGRFVLYQHGCNAAGTALGLAKDVAENNVNNNINARVLVVAVDMMSMYFHAPSEKRKKSMREG

Query:  KSSTGEG
        ++  G+G
Subjt:  KSSTGEG

O23730 Chalcone synthase 43.5e-0657.5Show/hide
Query:  EKRKKSMREGKSSTGEGLEWGALVALGPGLTLETLILHSV
        E R++S   G+++TGEGLEWG L   GPGLT+ET++L SV
Subjt:  EKRKKSMREGKSSTGEGLEWGALVALGPGLTLETLILHSV

P48389 Chalcone synthase5.8e-1733.93Show/hide
Query:  ATLLGIGTAVPPNFLYQTQYPDFYFRVTNSQHMTHSIRKFNRI---------------------------------------------------------
        AT+L IGTA PPN +YQ  YPD+YFRVT S+HMT    KF R+                                                         
Subjt:  ATLLGIGTAVPPNFLYQTQYPDFYFRVTNSQHMTHSIRKFNRI---------------------------------------------------------

Query:  W----------------------PDCQLSKLL----SVGRFVLYQHGCNAAGTALGLAKDVAENNVNNNINARVLVVAVDMMSMYFHAPSEKRKKSMREG
        W                       D QL+KLL    SV RF+LYQ GC A GT L LAKD+AENN     +ARVLVV  ++ ++ F  P+E    SM  G
Subjt:  W----------------------PDCQLSKLL----SVGRFVLYQHGCNAAGTALGLAKDVAENNVNNNINARVLVVAVDMMSMYFHAPSEKRKKSMREG

Query:  KSSTGEGLEWGAL-VALGPGLTLE
        ++  G+G   GAL V   P L++E
Subjt:  KSSTGEGLEWGAL-VALGPGLTLE

Q94FV7 Polyketide synthase BAS2.2e-1632.19Show/hide
Query:  KRATLLGIGTAVPPNFLYQTQYPDFYFRVTNSQHMTHSIRKFNRI-------------------------------------------------------
        K AT++ IGTA PPN  YQ  +PDFYFRVTNS H+ +  +KF R+                                                       
Subjt:  KRATLLGIGTAVPPNFLYQTQYPDFYFRVTNSQHMTHSIRKFNRI-------------------------------------------------------

Query:  --W----------------------PDCQLSKLL----SVGRFVLYQHGCNAAGTALGLAKDVAENNVNNNINARVLVVAVDMMSMYFHAPSEKRKKSMR
          W                       D QL+KLL    SV RF+ Y  GC A GT L LAKD+AENN      ARVL+V  +M +  F  PSE    SM 
Subjt:  --W----------------------PDCQLSKLL----SVGRFVLYQHGCNAAGTALGLAKDVAENNVNNNINARVLVVAVDMMSMYFHAPSEKRKKSMR

Query:  EGKSSTGEGLEWGALVALGPGLTLETLILHSVS
         G++  G+G     +V   P LT+E  I   VS
Subjt:  EGKSSTGEGLEWGALVALGPGLTLETLILHSVS

Q9LKP7 Chalcone synthase7.6e-1733.93Show/hide
Query:  ATLLGIGTAVPPNFLYQTQYPDFYFRVTNSQHMTHSIRKFNRI---------------------------------------------------------
        AT+L IGTA PPN +YQ  YPD+YFRVT S+HMT    KF R+                                                         
Subjt:  ATLLGIGTAVPPNFLYQTQYPDFYFRVTNSQHMTHSIRKFNRI---------------------------------------------------------

Query:  W----------------------PDCQLSKLL----SVGRFVLYQHGCNAAGTALGLAKDVAENNVNNNINARVLVVAVDMMSMYFHAPSEKRKKSMREG
        W                       D QL+KLL    SV RF+LYQ GC A GT L LAKD+AENN      ARVLVV  ++ ++ F  P+E    SM  G
Subjt:  W----------------------PDCQLSKLL----SVGRFVLYQHGCNAAGTALGLAKDVAENNVNNNINARVLVVAVDMMSMYFHAPSEKRKKSMREG

Query:  KSSTGEGLEWGAL-VALGPGLTLE
        ++  G+G   GAL V   P L++E
Subjt:  KSSTGEGLEWGAL-VALGPGLTLE

Arabidopsis top hitse value%identityAlignment
AT5G13930.1 Chalcone and stilbene synthase family protein4.0e-1329.95Show/hide
Query:  ATLLGIGTAVPPNFLYQTQYPDFYFRVTNSQHMTHSIRKFNRI---------------------------------------------------------
        A +L IGTA P N + Q +YPD+YFR+TNS+HMT    KF R+                                                         
Subjt:  ATLLGIGTAVPPNFLYQTQYPDFYFRVTNSQHMTHSIRKFNRI---------------------------------------------------------

Query:  W----------------------PDCQLSKLL----SVGRFVLYQHGCNAAGTALGLAKDVAENNVNNNINARVLVVAVDMMSMYFHAPSEKRKKSM
        W                       D QL+KLL    SV R ++YQ GC A GT L +AKD+AE    NN  ARVLVV  ++ ++ F  PS+    S+
Subjt:  W----------------------PDCQLSKLL----SVGRFVLYQHGCNAAGTALGLAKDVAENNVNNNINARVLVVAVDMMSMYFHAPSEKRKKSM

AT5G13930.1 Chalcone and stilbene synthase family protein7.8e-0959.52Show/hide
Query:  EKRKKSMREGKSSTGEGLEWGALVALGPGLTLETLILHSVSM
        E R+KS ++G ++TGEGLEWG L   GPGLT+ET++LHSV +
Subjt:  EKRKKSMREGKSSTGEGLEWGALVALGPGLTLETLILHSVSM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATGTAAGATGTTGGAGAGAGAGGAAGGCAATGAAAGTTGTGAGTATAATAATAATAATAAGAGAGCCACCCTATTGGGAATTGGCACAGCAGTCCCACCCAATTT
TTTGTACCAAACACAATATCCAGATTTCTATTTTCGAGTCACCAACAGCCAACATATGACACACTCGATACGGAAGTTCAATCGTATTTGGCCTGATTGCCAACTTTCAA
AGCTCCTCTCCGTGGGAAGATTTGTTTTATACCAACATGGTTGTAATGCAGCTGGAACAGCCCTTGGTCTAGCCAAGGATGTCGCTGAGAACAACGTTAATAATAATATT
AATGCTCGTGTTCTTGTGGTTGCTGTCGATATGATGTCCATGTATTTCCATGCCCCATCAGAGAAGAGGAAGAAGTCGATGAGAGAAGGAAAGAGTAGTACAGGTGAAGG
ATTAGAGTGGGGTGCCCTTGTTGCTCTAGGGCCTGGTCTCACTTTGGAGACTTTGATATTGCATAGTGTCTCTATGCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAATGTAAGATGTTGGAGAGAGAGGAAGGCAATGAAAGTTGTGAGTATAATAATAATAATAAGAGAGCCACCCTATTGGGAATTGGCACAGCAGTCCCACCCAATTT
TTTGTACCAAACACAATATCCAGATTTCTATTTTCGAGTCACCAACAGCCAACATATGACACACTCGATACGGAAGTTCAATCGTATTTGGCCTGATTGCCAACTTTCAA
AGCTCCTCTCCGTGGGAAGATTTGTTTTATACCAACATGGTTGTAATGCAGCTGGAACAGCCCTTGGTCTAGCCAAGGATGTCGCTGAGAACAACGTTAATAATAATATT
AATGCTCGTGTTCTTGTGGTTGCTGTCGATATGATGTCCATGTATTTCCATGCCCCATCAGAGAAGAGGAAGAAGTCGATGAGAGAAGGAAAGAGTAGTACAGGTGAAGG
ATTAGAGTGGGGTGCCCTTGTTGCTCTAGGGCCTGGTCTCACTTTGGAGACTTTGATATTGCATAGTGTCTCTATGCTTTGA
Protein sequenceShow/hide protein sequence
MECKMLEREEGNESCEYNNNNKRATLLGIGTAVPPNFLYQTQYPDFYFRVTNSQHMTHSIRKFNRIWPDCQLSKLLSVGRFVLYQHGCNAAGTALGLAKDVAENNVNNNI
NARVLVVAVDMMSMYFHAPSEKRKKSMREGKSSTGEGLEWGALVALGPGLTLETLILHSVSML