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Tan0003720 (gene) of Snake gourd v1 genome

Gene IDTan0003720
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionAspergillus nuclease S(1)
Genome locationLG03:77881526..77884461
RNA-Seq ExpressionTan0003720
SyntenyTan0003720
Gene Ontology termsGO:0006308 - DNA catabolic process (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0000014 - single-stranded DNA endodeoxyribonuclease activity (molecular function)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004521 - endoribonuclease activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR003154 - S1/P1 nuclease
IPR008947 - Phospholipase C/P1 nuclease domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7033894.1 Endonuclease 4 [Cucurbita argyrosperma subsp. argyrosperma]1.5e-3382.14Show/hide
Query:  FLLLVPGISSKGNEGHYVVCKIPEGYFTEDTLSMVKELLPSSAEGDLAVICSLPDEIRRKAHYCWSSALHYIDMPDFFCNYNYS
        FLLLVPGI   G EGHY++CKI EGYFTEDTLSMVKELLP+SAEGDLA +CS PDEIR KAHY WSSALHY+D PDFFCNYNYS
Subjt:  FLLLVPGISSKGNEGHYVVCKIPEGYFTEDTLSMVKELLPSSAEGDLAVICSLPDEIRRKAHYCWSSALHYIDMPDFFCNYNYS

XP_022142132.1 endonuclease 4-like [Momordica charantia]1.1e-3380.23Show/hide
Query:  SFFLLLVPGISSKGNEGHYVVCKIPEGYFTEDTLSMVKELLPSSAEGDLAVICSLPDEIRRKAHYCWSSALHYIDMPDFFCNYNYS
        S FLLLVPGI   G EGHY +CKI EGYFTED LSMVKELLP+SAEGDLA +CS PDEIRRKAHY WSS LHY+D PDFFCNYNYS
Subjt:  SFFLLLVPGISSKGNEGHYVVCKIPEGYFTEDTLSMVKELLPSSAEGDLAVICSLPDEIRRKAHYCWSSALHYIDMPDFFCNYNYS

XP_022950165.1 endonuclease 4-like [Cucurbita moschata]1.5e-3382.14Show/hide
Query:  FLLLVPGISSKGNEGHYVVCKIPEGYFTEDTLSMVKELLPSSAEGDLAVICSLPDEIRRKAHYCWSSALHYIDMPDFFCNYNYS
        FLLLVPGI   G EGHY++CKI EGYFTEDTLSMVKELLP+SAEGDLA +CS PDEIR KAHY WSSALHY+D PDFFCNYNYS
Subjt:  FLLLVPGISSKGNEGHYVVCKIPEGYFTEDTLSMVKELLPSSAEGDLAVICSLPDEIRRKAHYCWSSALHYIDMPDFFCNYNYS

XP_022978904.1 endonuclease 4-like [Cucurbita maxima]1.5e-3382.14Show/hide
Query:  FLLLVPGISSKGNEGHYVVCKIPEGYFTEDTLSMVKELLPSSAEGDLAVICSLPDEIRRKAHYCWSSALHYIDMPDFFCNYNYS
        FLLLVPGI   G EGHY++CKI EGYFTEDTLSMVKELLP+SAEGDLA +CS PDEIR KAHY WSSALHY+D PDFFCNYNYS
Subjt:  FLLLVPGISSKGNEGHYVVCKIPEGYFTEDTLSMVKELLPSSAEGDLAVICSLPDEIRRKAHYCWSSALHYIDMPDFFCNYNYS

XP_023543506.1 endonuclease 4-like [Cucurbita pepo subsp. pepo]1.5e-3382.14Show/hide
Query:  FLLLVPGISSKGNEGHYVVCKIPEGYFTEDTLSMVKELLPSSAEGDLAVICSLPDEIRRKAHYCWSSALHYIDMPDFFCNYNYS
        FLLLVPGI   G EGHY++CKI EGYFTEDTLSMVKELLP+SAEGDLA +CS PDEIR KAHY WSSALHY+D PDFFCNYNYS
Subjt:  FLLLVPGISSKGNEGHYVVCKIPEGYFTEDTLSMVKELLPSSAEGDLAVICSLPDEIRRKAHYCWSSALHYIDMPDFFCNYNYS

TrEMBL top hitse value%identityAlignment
A0A1S3CEU3 Aspergillus nuclease S(1)8.5e-2769.05Show/hide
Query:  FLLLVPGISSKGNEGHYVVCKIPEGYFTEDTLSMVKELLPSSAEGDLAVICSLPDEIRRKAHYCWSSALHYIDMPDFFCNYNYS
        FLLL+PGI   G EGHY VCKI EGY TED LSMV+ELLP+SAEGDLA +CS  DE+R    Y WSS LH++D PDFFCNYN S
Subjt:  FLLLVPGISSKGNEGHYVVCKIPEGYFTEDTLSMVKELLPSSAEGDLAVICSLPDEIRRKAHYCWSSALHYIDMPDFFCNYNYS

A0A5D3E4R3 Aspergillus nuclease S(1)8.5e-2769.05Show/hide
Query:  FLLLVPGISSKGNEGHYVVCKIPEGYFTEDTLSMVKELLPSSAEGDLAVICSLPDEIRRKAHYCWSSALHYIDMPDFFCNYNYS
        FLLL+PGI   G EGHY VCKI EGY TED LSMV+ELLP+SAEGDLA +CS  DE+R    Y WSS LH++D PDFFCNYN S
Subjt:  FLLLVPGISSKGNEGHYVVCKIPEGYFTEDTLSMVKELLPSSAEGDLAVICSLPDEIRRKAHYCWSSALHYIDMPDFFCNYNYS

A0A6J1CLU4 Aspergillus nuclease S(1)5.5e-3480.23Show/hide
Query:  SFFLLLVPGISSKGNEGHYVVCKIPEGYFTEDTLSMVKELLPSSAEGDLAVICSLPDEIRRKAHYCWSSALHYIDMPDFFCNYNYS
        S FLLLVPGI   G EGHY +CKI EGYFTED LSMVKELLP+SAEGDLA +CS PDEIRRKAHY WSS LHY+D PDFFCNYNYS
Subjt:  SFFLLLVPGISSKGNEGHYVVCKIPEGYFTEDTLSMVKELLPSSAEGDLAVICSLPDEIRRKAHYCWSSALHYIDMPDFFCNYNYS

A0A6J1GEX6 Aspergillus nuclease S(1)7.2e-3482.14Show/hide
Query:  FLLLVPGISSKGNEGHYVVCKIPEGYFTEDTLSMVKELLPSSAEGDLAVICSLPDEIRRKAHYCWSSALHYIDMPDFFCNYNYS
        FLLLVPGI   G EGHY++CKI EGYFTEDTLSMVKELLP+SAEGDLA +CS PDEIR KAHY WSSALHY+D PDFFCNYNYS
Subjt:  FLLLVPGISSKGNEGHYVVCKIPEGYFTEDTLSMVKELLPSSAEGDLAVICSLPDEIRRKAHYCWSSALHYIDMPDFFCNYNYS

A0A6J1IVA4 Aspergillus nuclease S(1)7.2e-3482.14Show/hide
Query:  FLLLVPGISSKGNEGHYVVCKIPEGYFTEDTLSMVKELLPSSAEGDLAVICSLPDEIRRKAHYCWSSALHYIDMPDFFCNYNYS
        FLLLVPGI   G EGHY++CKI EGYFTEDTLSMVKELLP+SAEGDLA +CS PDEIR KAHY WSSALHY+D PDFFCNYNYS
Subjt:  FLLLVPGISSKGNEGHYVVCKIPEGYFTEDTLSMVKELLPSSAEGDLAVICSLPDEIRRKAHYCWSSALHYIDMPDFFCNYNYS

SwissProt top hitse value%identityAlignment
F4JJL0 Endonuclease 43.5e-2256.25Show/hide
Query:  LVPGISSKGNEGHYVVCKIPEGYFTEDTLSMVKELLPSSAEGDLAVICSLPDEIRRKAHYCWSSALHYIDMPDFFCNYNY
        L+ G    G EGHY VCKI E YF E+T++ VK+LLP SA+GDLA +CS PDEI+    + W+S LHY+D PD+ CNY Y
Subjt:  LVPGISSKGNEGHYVVCKIPEGYFTEDTLSMVKELLPSSAEGDLAVICSLPDEIRRKAHYCWSSALHYIDMPDFFCNYNY

F4JJL3 Endonuclease 51.1e-1849.38Show/hide
Query:  LVPGISSKGNEGHYVVCKIPEGYFTEDTLSMVKELLPSSAE-GDLAVICSLPDEIRRKAHYCWSSALHYIDMPDFFCNYNY
        LV G    G +GHY VCK+ EG+F +DT++ VK+LLP S + G LA  CS PDEI++ + + W+S LHY++ P++ CNY Y
Subjt:  LVPGISSKGNEGHYVVCKIPEGYFTEDTLSMVKELLPSSAE-GDLAVICSLPDEIRRKAHYCWSSALHYIDMPDFFCNYNY

Q8LDW6 Endonuclease 31.0e-2153.49Show/hide
Query:  LVPGISSKGNEGHYVVCKIPEGYFTEDTLSMVKELLPSSAEGDLAVICSLPDEIRRKAHYCWSSALHYIDMPDFFCNYNYSIEIVK
        LV G    G+ GHY VCKI + YF EDT+  VK+LLP SA G+LA +CS PDEI++   + W+SALH+ D PD+ CNY YS +  K
Subjt:  LVPGISSKGNEGHYVVCKIPEGYFTEDTLSMVKELLPSSAEGDLAVICSLPDEIRRKAHYCWSSALHYIDMPDFFCNYNYSIEIVK

Q9C9G4 Endonuclease 21.0e-1345.88Show/hide
Query:  FFLLLVPGISSKGNEGHYVVCKIPEGYFTEDTLSMVKELLPSSAEGDLAVICSLPDEIRRKAHYCWSSALHYIDMPDFFCNYNYS
        + L   P I   G EGH ++CKI +    E     VKELLP SAEGDL+ +C   D +  K  Y WSS LHYI+ PD  C+Y Y+
Subjt:  FFLLLVPGISSKGNEGHYVVCKIPEGYFTEDTLSMVKELLPSSAEGDLAVICSLPDEIRRKAHYCWSSALHYIDMPDFFCNYNYS

Q9SXA6 Endonuclease 13.9e-1340.96Show/hide
Query:  LLLVPGISSKGNEGHYVVCKIPEGYFTEDTLSMVKELLPSSAEGDLAVICSLPDEIRRKAHYCWSSALHYIDMPDFFCNYNYS
        L  V  + S   EGH + C+I +         +V+ LLP   +GDL+ +C  PD+IR    Y W+S LHYID PD  C+Y YS
Subjt:  LLLVPGISSKGNEGHYVVCKIPEGYFTEDTLSMVKELLPSSAEGDLAVICSLPDEIRRKAHYCWSSALHYIDMPDFFCNYNYS

Arabidopsis top hitse value%identityAlignment
AT1G68290.1 endonuclease 27.4e-1545.88Show/hide
Query:  FFLLLVPGISSKGNEGHYVVCKIPEGYFTEDTLSMVKELLPSSAEGDLAVICSLPDEIRRKAHYCWSSALHYIDMPDFFCNYNYS
        + L   P I   G EGH ++CKI +    E     VKELLP SAEGDL+ +C   D +  K  Y WSS LHYI+ PD  C+Y Y+
Subjt:  FFLLLVPGISSKGNEGHYVVCKIPEGYFTEDTLSMVKELLPSSAEGDLAVICSLPDEIRRKAHYCWSSALHYIDMPDFFCNYNYS

AT4G21585.1 endonuclease 42.5e-2356.25Show/hide
Query:  LVPGISSKGNEGHYVVCKIPEGYFTEDTLSMVKELLPSSAEGDLAVICSLPDEIRRKAHYCWSSALHYIDMPDFFCNYNY
        L+ G    G EGHY VCKI E YF E+T++ VK+LLP SA+GDLA +CS PDEI+    + W+S LHY+D PD+ CNY Y
Subjt:  LVPGISSKGNEGHYVVCKIPEGYFTEDTLSMVKELLPSSAEGDLAVICSLPDEIRRKAHYCWSSALHYIDMPDFFCNYNY

AT4G21590.1 endonuclease 37.3e-2353.49Show/hide
Query:  LVPGISSKGNEGHYVVCKIPEGYFTEDTLSMVKELLPSSAEGDLAVICSLPDEIRRKAHYCWSSALHYIDMPDFFCNYNYSIEIVK
        LV G    G+ GHY VCKI + YF EDT+  VK+LLP SA G+LA +CS PDEI++   + W+SALH+ D PD+ CNY YS +  K
Subjt:  LVPGISSKGNEGHYVVCKIPEGYFTEDTLSMVKELLPSSAEGDLAVICSLPDEIRRKAHYCWSSALHYIDMPDFFCNYNYSIEIVK

AT4G21590.2 endonuclease 37.3e-2353.49Show/hide
Query:  LVPGISSKGNEGHYVVCKIPEGYFTEDTLSMVKELLPSSAEGDLAVICSLPDEIRRKAHYCWSSALHYIDMPDFFCNYNYSIEIVK
        LV G    G+ GHY VCKI + YF EDT+  VK+LLP SA G+LA +CS PDEI++   + W+SALH+ D PD+ CNY YS +  K
Subjt:  LVPGISSKGNEGHYVVCKIPEGYFTEDTLSMVKELLPSSAEGDLAVICSLPDEIRRKAHYCWSSALHYIDMPDFFCNYNYSIEIVK

AT4G21600.1 endonuclease 57.6e-2049.38Show/hide
Query:  LVPGISSKGNEGHYVVCKIPEGYFTEDTLSMVKELLPSSAE-GDLAVICSLPDEIRRKAHYCWSSALHYIDMPDFFCNYNY
        LV G    G +GHY VCK+ EG+F +DT++ VK+LLP S + G LA  CS PDEI++ + + W+S LHY++ P++ CNY Y
Subjt:  LVPGISSKGNEGHYVVCKIPEGYFTEDTLSMVKELLPSSAE-GDLAVICSLPDEIRRKAHYCWSSALHYIDMPDFFCNYNY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTTCGTTTTTCCTGCTACTTGTACCTGGAATCTCCAGCAAGGGAAATGAAGGTCACTATGTAGTTTGCAAGATACCGGAGGGTTATTTCACTGAAGATACTCTATC
CATGGTCAAGGAATTACTTCCATCTTCTGCTGAGGGAGATCTTGCGGTTATATGCTCCTTGCCTGATGAGATTCGACGAAAGGCTCATTATTGCTGGAGTAGTGCCTTAC
ACTACATTGACATGCCTGATTTCTTTTGTAATTATAATTACTCGATTGAAATAGTGAAGCGTAAACTAAAGATGAAATCTTTGAATTGA
mRNA sequenceShow/hide mRNA sequence
AGAAGCTCAATTAGCATATCACGATAGCGTGTTAACTCGAATCCCCAATTACTATTGTACTAACAAAAACTCTCCTTTCTTAGTTTCTAATGTTGTTTACCTCTGATGCT
TGAGAGGCAAGCGCTCAAGAACGGGAAGCAAAGCCAGTTCAATTTTGCAGACGAGCTTCATAGCCGACGGTTAAGCAGGCAAAGTTGGAGATAATCGCTGCGACAAAGTA
GCTTTCATATTTTATCGTGTTGATACTCGAGTTGGGTATTTTGGTGCGAAGACCATACATGGGCCGGTCTGAGCTTTGCTAGATCGCGAATGCTTTCGTTTTTCCTGCTA
CTTGTACCTGGAATCTCCAGCAAGGGAAATGAAGGTCACTATGTAGTTTGCAAGATACCGGAGGGTTATTTCACTGAAGATACTCTATCCATGGTCAAGGAATTACTTCC
ATCTTCTGCTGAGGGAGATCTTGCGGTTATATGCTCCTTGCCTGATGAGATTCGACGAAAGGCTCATTATTGCTGGAGTAGTGCCTTACACTACATTGACATGCCTGATT
TCTTTTGTAATTATAATTACTCGATTGAAATAGTGAAGCGTAAACTAAAGATGAAATCTTTGAATTGAAACTTGAATGAAGCTAACATATGCACATTCTGGAAGCTCTTA
CGTCATCAAATATGGAAAAGAAGAAAGCTCGTTTGACACGTAAGTCCTTGTTGATTATTTGATTTCCTTCCTAATTACCTATAATTATGGAATTGGGAACAGTGACATCT
CTGATTTCATATAGAAACCACTTTAAATATGTTACATGCTTTTGAGTATGAC
Protein sequenceShow/hide protein sequence
MLSFFLLLVPGISSKGNEGHYVVCKIPEGYFTEDTLSMVKELLPSSAEGDLAVICSLPDEIRRKAHYCWSSALHYIDMPDFFCNYNYSIEIVKRKLKMKSLN