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Tan0003723 (gene) of Snake gourd v1 genome

Gene IDTan0003723
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationLG04:82086598..82086948
RNA-Seq ExpressionTan0003723
SyntenyTan0003723
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_031735972.1 uncharacterized protein LOC116401693 [Cucumis sativus]2.1e-3675.21Show/hide
Query:  MVEMERKINLLMKAVEERDLEIAYLKSQVQNKETVESNQTPTVRNNDKGKNIVQEGQPPQPA-SVASLSVQQLQDMIMNSIRAQYGRPVQNPLTYSKPYT
        M EMERKINLLMK V+ERD EIA LK Q+Q +ET ES+QTP V+ +DKGKN+VQE QP Q + SVASLSVQQLQDMI NSIRAQYG P Q    YSKPYT
Subjt:  MVEMERKINLLMKAVEERDLEIAYLKSQVQNKETVESNQTPTVRNNDKGKNIVQEGQPPQPA-SVASLSVQQLQDMIMNSIRAQYGRPVQNPLTYSKPYT

Query:  KRIDNLRMPTGYQPPKF
        KRIDNLRMP GYQPPKF
Subjt:  KRIDNLRMPTGYQPPKF

XP_031737053.1 uncharacterized protein LOC116402138 [Cucumis sativus]8.1e-3674.36Show/hide
Query:  MVEMERKINLLMKAVEERDLEIAYLKSQVQNKETVESNQTPTVRNNDKGKNIVQEGQPPQPA-SVASLSVQQLQDMIMNSIRAQYGRPVQNPLTYSKPYT
        M EMERKINLLMK V+ERD EIA LK Q+Q +ET ES+QTP V+ +DKGKN+VQE QP Q + SVASLSVQQLQDMI +SIRAQYG P Q    YSKPYT
Subjt:  MVEMERKINLLMKAVEERDLEIAYLKSQVQNKETVESNQTPTVRNNDKGKNIVQEGQPPQPA-SVASLSVQQLQDMIMNSIRAQYGRPVQNPLTYSKPYT

Query:  KRIDNLRMPTGYQPPKF
        KRIDNLRMP GYQPPKF
Subjt:  KRIDNLRMPTGYQPPKF

XP_031739134.1 uncharacterized protein LOC116402863 [Cucumis sativus]8.1e-3674.36Show/hide
Query:  MVEMERKINLLMKAVEERDLEIAYLKSQVQNKETVESNQTPTVRNNDKGKNIVQEGQPPQPA-SVASLSVQQLQDMIMNSIRAQYGRPVQNPLTYSKPYT
        M EMERKINLLMK V+ERD EIA LK Q+Q +ET ES+QTP V+ +DKGKN+VQE QP Q + SVASLSVQQLQDMI +SIRAQYG P Q    YSKPYT
Subjt:  MVEMERKINLLMKAVEERDLEIAYLKSQVQNKETVESNQTPTVRNNDKGKNIVQEGQPPQPA-SVASLSVQQLQDMIMNSIRAQYGRPVQNPLTYSKPYT

Query:  KRIDNLRMPTGYQPPKF
        KRIDNLRMP GYQPPKF
Subjt:  KRIDNLRMPTGYQPPKF

XP_031742032.1 uncharacterized protein LOC116404025 [Cucumis sativus]8.1e-3674.36Show/hide
Query:  MVEMERKINLLMKAVEERDLEIAYLKSQVQNKETVESNQTPTVRNNDKGKNIVQEGQPPQPA-SVASLSVQQLQDMIMNSIRAQYGRPVQNPLTYSKPYT
        M EMERKINLLMK V+ERD EIA LK Q+Q +ET ES+QTP V+ +DKGKN+VQE QP Q + SVASLSVQQLQDMI +SIRAQYG P Q    YSKPYT
Subjt:  MVEMERKINLLMKAVEERDLEIAYLKSQVQNKETVESNQTPTVRNNDKGKNIVQEGQPPQPA-SVASLSVQQLQDMIMNSIRAQYGRPVQNPLTYSKPYT

Query:  KRIDNLRMPTGYQPPKF
        KRIDNLRMP GYQPPKF
Subjt:  KRIDNLRMPTGYQPPKF

XP_031742199.1 uncharacterized protein LOC105435721 [Cucumis sativus]2.1e-3675.21Show/hide
Query:  MVEMERKINLLMKAVEERDLEIAYLKSQVQNKETVESNQTPTVRNNDKGKNIVQEGQPPQPA-SVASLSVQQLQDMIMNSIRAQYGRPVQNPLTYSKPYT
        M EMERKINLLMK V+ERD EIA LK Q+Q +ET ES+QTP V+ +DKGKN+VQE QP Q + SVASLSVQQLQDMI NSIRAQYG P Q    YSKPYT
Subjt:  MVEMERKINLLMKAVEERDLEIAYLKSQVQNKETVESNQTPTVRNNDKGKNIVQEGQPPQPA-SVASLSVQQLQDMIMNSIRAQYGRPVQNPLTYSKPYT

Query:  KRIDNLRMPTGYQPPKF
        KRIDNLRMP GYQPPKF
Subjt:  KRIDNLRMPTGYQPPKF

TrEMBL top hitse value%identityAlignment
A0A5A7TC87 Ty3-gypsy retrotransposon protein2.5e-3573.5Show/hide
Query:  MVEMERKINLLMKAVEERDLEIAYLKSQVQNKETVESNQTPTVRNNDKGKNIVQEGQPPQPA-SVASLSVQQLQDMIMNSIRAQYGRPVQNPLTYSKPYT
        MVEME+KIN LMK VEERD EIA LK Q++  ET ES++TP V+  DKGKN+VQE QP Q + SVASLSVQQLQDMI+NSIRAQYG P Q    YSKPYT
Subjt:  MVEMERKINLLMKAVEERDLEIAYLKSQVQNKETVESNQTPTVRNNDKGKNIVQEGQPPQPA-SVASLSVQQLQDMIMNSIRAQYGRPVQNPLTYSKPYT

Query:  KRIDNLRMPTGYQPPKF
        KRIDNLRMP GYQPPKF
Subjt:  KRIDNLRMPTGYQPPKF

A0A5A7VDN4 Ty3-gypsy retrotransposon protein9.6e-3571.79Show/hide
Query:  MVEMERKINLLMKAVEERDLEIAYLKSQVQNKETVESNQTPTVRNNDKGKNIVQEGQPPQPA-SVASLSVQQLQDMIMNSIRAQYGRPVQNPLTYSKPYT
        M EMERKIN LMKAVEERD EI  L+ Q++ +ET ES+QTP V+  DKGKN+VQ+ QP Q + SVASLSVQQLQDMI NSIRAQYG P      YSKPYT
Subjt:  MVEMERKINLLMKAVEERDLEIAYLKSQVQNKETVESNQTPTVRNNDKGKNIVQEGQPPQPA-SVASLSVQQLQDMIMNSIRAQYGRPVQNPLTYSKPYT

Query:  KRIDNLRMPTGYQPPKF
        KRIDNLRMP GYQPPKF
Subjt:  KRIDNLRMPTGYQPPKF

A0A5D3BY54 Ty3-gypsy retrotransposon protein1.3e-3472.65Show/hide
Query:  MVEMERKINLLMKAVEERDLEIAYLKSQVQNKETVESNQTPTVRNNDKGKNIVQEGQPPQPA-SVASLSVQQLQDMIMNSIRAQYGRPVQNPLTYSKPYT
        M EMERKIN LMKAVEERD EI  L+ Q++ +ET ES+QTP V+  DKGKN+VQE QP Q + SVASLSVQQLQDMI NSIRAQYG P Q    YSK YT
Subjt:  MVEMERKINLLMKAVEERDLEIAYLKSQVQNKETVESNQTPTVRNNDKGKNIVQEGQPPQPA-SVASLSVQQLQDMIMNSIRAQYGRPVQNPLTYSKPYT

Query:  KRIDNLRMPTGYQPPKF
        KRIDNLRMP GYQPPKF
Subjt:  KRIDNLRMPTGYQPPKF

A0A5D3BZH8 Ty3-gypsy retrotransposon protein5.6e-3574.36Show/hide
Query:  MVEMERKINLLMKAVEERDLEIAYLKSQVQNKETVESNQTPTVRNNDKGKNIVQEGQPPQPA-SVASLSVQQLQDMIMNSIRAQYGRPVQNPLTYSKPYT
        M EMERKIN LMK VEERD EIA LK Q++  ET ES+QTP V+  DKGKN+VQE QP Q + SVASLSVQQLQDMI NSIRAQYG P Q    YSKPYT
Subjt:  MVEMERKINLLMKAVEERDLEIAYLKSQVQNKETVESNQTPTVRNNDKGKNIVQEGQPPQPA-SVASLSVQQLQDMIMNSIRAQYGRPVQNPLTYSKPYT

Query:  KRIDNLRMPTGYQPPKF
        KRIDNLRMP GYQPPKF
Subjt:  KRIDNLRMPTGYQPPKF

A0A5D3DIN4 Ty3-gypsy retrotransposon protein2.5e-3573.5Show/hide
Query:  MVEMERKINLLMKAVEERDLEIAYLKSQVQNKETVESNQTPTVRNNDKGKNIVQEGQPPQPA-SVASLSVQQLQDMIMNSIRAQYGRPVQNPLTYSKPYT
        MVEME+KIN LMK VEERD EIA LK Q++  ET ES++TP V+  DKGKN+VQE QP Q + SVASLSVQQLQDMI+NSIRAQYG P Q    YSKPYT
Subjt:  MVEMERKINLLMKAVEERDLEIAYLKSQVQNKETVESNQTPTVRNNDKGKNIVQEGQPPQPA-SVASLSVQQLQDMIMNSIRAQYGRPVQNPLTYSKPYT

Query:  KRIDNLRMPTGYQPPKF
        KRIDNLRMP GYQPPKF
Subjt:  KRIDNLRMPTGYQPPKF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGAGATGGAAAGAAAAATCAATCTCCTGATGAAGGCGGTAGAAGAAAGAGATCTTGAAATCGCCTACCTCAAAAGCCAAGTCCAAAACAAAGAAACGGTTGAATC
CAACCAAACCCCTACAGTAAGAAACAACGACAAGGGAAAAAATATTGTCCAAGAGGGGCAACCGCCTCAACCAGCTTCAGTTGCTTCTTTATCCGTCCAACAACTACAAG
ACATGATCATGAATTCTATCAGAGCTCAGTATGGCAGACCCGTTCAAAATCCTCTCACGTACTCCAAACCGTACACCAAGAGAATTGACAACTTGAGGATGCCCACAGGG
TACCAACCTCCAAAATTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTGGAGATGGAAAGAAAAATCAATCTCCTGATGAAGGCGGTAGAAGAAAGAGATCTTGAAATCGCCTACCTCAAAAGCCAAGTCCAAAACAAAGAAACGGTTGAATC
CAACCAAACCCCTACAGTAAGAAACAACGACAAGGGAAAAAATATTGTCCAAGAGGGGCAACCGCCTCAACCAGCTTCAGTTGCTTCTTTATCCGTCCAACAACTACAAG
ACATGATCATGAATTCTATCAGAGCTCAGTATGGCAGACCCGTTCAAAATCCTCTCACGTACTCCAAACCGTACACCAAGAGAATTGACAACTTGAGGATGCCCACAGGG
TACCAACCTCCAAAATTCTAG
Protein sequenceShow/hide protein sequence
MVEMERKINLLMKAVEERDLEIAYLKSQVQNKETVESNQTPTVRNNDKGKNIVQEGQPPQPASVASLSVQQLQDMIMNSIRAQYGRPVQNPLTYSKPYTKRIDNLRMPTG
YQPPKF