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Tan0003735 (gene) of Snake gourd v1 genome

Gene IDTan0003735
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionconserved peptide upstream open reading frame 33
Genome locationLG11:5411103..5413468
RNA-Seq ExpressionTan0003735
SyntenyTan0003735
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7016183.1 hypothetical protein SDJN02_21287, partial [Cucurbita argyrosperma subsp. argyrosperma]7.3e-1595.45Show/hide
Query:  VFETDEELGNNRAGGVMGFCISPLGTPARLLWSTSFFRHKLMIF
        VFETDE LGNNRAG VMGFCISPLGTPARLLWSTSFFRHKLMIF
Subjt:  VFETDEELGNNRAGGVMGFCISPLGTPARLLWSTSFFRHKLMIF

KAG7033126.1 hypothetical protein SDJN02_07179, partial [Cucurbita argyrosperma subsp. argyrosperma]3.2e-1869.44Show/hide
Query:  LWKFRNLFNLTMRSSCAGPPMGSNIFTEVFETDEELGNNRAGGVMGFCISPLGTPARLLWSTSFFRHKLMIF
        LW F  + N  +RS             EVFETDEELGNNRAGGVMGFC+SPLGTPARLLWSTSFFRHKLMIF
Subjt:  LWKFRNLFNLTMRSSCAGPPMGSNIFTEVFETDEELGNNRAGGVMGFCISPLGTPARLLWSTSFFRHKLMIF

PHU27564.1 hypothetical protein BC332_05896 [Capsicum chinense]6.8e-0589.29Show/hide
Query:  MGFCISPLGTPARLLWSTSFFRHKLMIF
        MGFCI PL TPARLLWSTSFFRHKLM+F
Subjt:  MGFCISPLGTPARLLWSTSFFRHKLMIF

PIN00164.1 hypothetical protein CDL12_27332 [Handroanthus impetiginosus]5.2e-0586.21Show/hide
Query:  VMGFCISPLGTPARLLWSTSFFRHKLMIF
        +MGFCI PL TPARLLWSTSFFRHKLM+F
Subjt:  VMGFCISPLGTPARLLWSTSFFRHKLMIF

XP_030447493.1 deoxynucleoside triphosphate triphosphohydrolase SAMHD1 homolog [Syzygium oleosum]2.5e-0780Show/hide
Query:  EELGNNRAG-GVMGFCISPLGTPARLLWSTSFFRHKLMIF
        EELG    G GVMGFCI PL TPARLLWSTSFFRHKLM+F
Subjt:  EELGNNRAG-GVMGFCISPLGTPARLLWSTSFFRHKLMIF

TrEMBL top hitse value%identityAlignment
A0A2G3D9B2 Uncharacterized protein3.3e-0589.29Show/hide
Query:  MGFCISPLGTPARLLWSTSFFRHKLMIF
        MGFCI PL TPARLLWSTSFFRHKLM+F
Subjt:  MGFCISPLGTPARLLWSTSFFRHKLMIF

A0A2G9G4C3 Uncharacterized protein2.5e-0586.21Show/hide
Query:  VMGFCISPLGTPARLLWSTSFFRHKLMIF
        +MGFCI PL TPARLLWSTSFFRHKLM+F
Subjt:  VMGFCISPLGTPARLLWSTSFFRHKLMIF

A0A2G9GBV9 Uncharacterized protein2.8e-0479.31Show/hide
Query:  VMGFCISPLGTPARLLWSTSFFRHKLMIF
        +MGFCI PL TPARLLW +SFFRHKLM+F
Subjt:  VMGFCISPLGTPARLLWSTSFFRHKLMIF

A0A2I4FCK2 uncharacterized protein LOC1089975122.8e-0434.38Show/hide
Query:  LNDGLPTSLNICKKGVVTNFCCLLCRKKVESVTHTFW-----MDFW----SPLDFWG---------WM--IKTLSNENLSKAITILWSLWKFRNLF
        LN+ LPTS+N+ K+ V+ +  C +CR++ E V H  W      D W    SP+  W          WM  IK LS + L + + I+  +W  RN F
Subjt:  LNDGLPTSLNICKKGVVTNFCCLLCRKKVESVTHTFW-----MDFW----SPLDFWG---------WM--IKTLSNENLSKAITILWSLWKFRNLF

A2NW02 A.thaliana homeobox gene Athb-1 mRNA7.4e-0582.76Show/hide
Query:  VMGFCISPLGTPARLLWSTSFFRHKLMIF
        +MGFCI PL +PARLLWSTSFFRHK+MIF
Subjt:  VMGFCISPLGTPARLLWSTSFFRHKLMIF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G01472.1 conserved peptide upstream open reading frame 331.9e-0885.71Show/hide
Query:  MGFCISPLGTPARLLWSTSFFRHKLMIF
        MGFCI PL +PARLLWSTSFFRHK+MIF
Subjt:  MGFCISPLGTPARLLWSTSFFRHKLMIF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTAACGACGGTCTCCCTACCTCCCTTAATATTTGCAAAAAAGGGGTTGTGACTAACTTTTGTTGTTTGCTTTGCAGGAAAAAGGTGGAGTCTGTCACTCACACTTT
CTGGATGGATTTTTGGTCTCCTCTTGACTTTTGGGGTTGGATGATAAAGACTCTTAGTAACGAAAACCTTTCCAAGGCTATCACTATTTTGTGGAGTCTTTGGAAATTTC
GAAATCTCTTCAATCTCACTATGCGTTCTTCCTGTGCAGGTCCACCTATGGGTTCGAATATATTCACAGAGGTTTTCGAGACTGACGAAGAGCTGGGTAATAACAGAGCT
GGTGGTGTGATGGGGTTTTGTATTTCTCCATTGGGAACACCGGCTAGGTTACTGTGGAGCACCAGCTTCTTCCGCCACAAGCTCATGATTTTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGCTTAACGACGGTCTCCCTACCTCCCTTAATATTTGCAAAAAAGGGGTTGTGACTAACTTTTGTTGTTTGCTTTGCAGGAAAAAGGTGGAGTCTGTCACTCACACTTT
CTGGATGGATTTTTGGTCTCCTCTTGACTTTTGGGGTTGGATGATAAAGACTCTTAGTAACGAAAACCTTTCCAAGGCTATCACTATTTTGTGGAGTCTTTGGAAATTTC
GAAATCTCTTCAATCTCACTATGCGTTCTTCCTGTGCAGGTCCACCTATGGGTTCGAATATATTCACAGAGGTTTTCGAGACTGACGAAGAGCTGGGTAATAACAGAGCT
GGTGGTGTGATGGGGTTTTGTATTTCTCCATTGGGAACACCGGCTAGGTTACTGTGGAGCACCAGCTTCTTCCGCCACAAGCTCATGATTTTCTAA
Protein sequenceShow/hide protein sequence
MLNDGLPTSLNICKKGVVTNFCCLLCRKKVESVTHTFWMDFWSPLDFWGWMIKTLSNENLSKAITILWSLWKFRNLFNLTMRSSCAGPPMGSNIFTEVFETDEELGNNRA
GGVMGFCISPLGTPARLLWSTSFFRHKLMIF