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Tan0003746 (gene) of Snake gourd v1 genome

Gene IDTan0003746
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionPlant self-incompatibility protein S1 family
Genome locationLG09:29757637..29758050
RNA-Seq ExpressionTan0003746
SyntenyTan0003746
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ABY56091.1 self-incompatibility protein 1 [Cucumis melo]3.5e-3855.47Show/hide
Query:  MDSSSTLALSVLVMLFPGLNGFEESISLLPETTLTTINKLVGPVLSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTLFSCSFVWVEGGAHNFAIYDF
        M SS  L  S+ ++L   L+  +E ISLLPETT+T +N++ GP+L +HCRSK +DLGV+V+  + SYSF FRPNVWGTTLF C F WV+G  H F IYDF
Subjt:  MDSSSTLALSVLVMLFPGLNGFEESISLLPETTLTTINKLVGPVLSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTLFSCSFVWVEGGAHNFAIYDF

Query:  HRDANRCTDCRWEIYRDGPCLLHPKDTGTYNVCFPWN
         RD   CT+CRW +Y  GPCL H + + T   CFPWN
Subjt:  HRDANRCTDCRWEIYRDGPCLLHPKDTGTYNVCFPWN

ABY56092.1 self-incompatibility protein 2 [Cucumis melo]5.0e-3755.73Show/hide
Query:  LALSVLVMLFPGLNGFEESISLLPETTLTTINKLVGPVLSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDANR
        L  S+ ++L   L+  +E ISLLPETT+T +N++ GP+L +HCRSK +DLGV+V+  + SYSF FRPNVWGTTLF C F WV+G  H F IYDF RD   
Subjt:  LALSVLVMLFPGLNGFEESISLLPETTLTTINKLVGPVLSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDANR

Query:  CTDCRWEIYRDGPCLLHPKDTGTYNVCFPWN
        CT+CRW +Y  GPCL H + + T   CFPWN
Subjt:  CTDCRWEIYRDGPCLLHPKDTGTYNVCFPWN

KAA0045871.1 putative mitochondrial protein [Cucumis melo var. makuwa]1.3e-2447.1Show/hide
Query:  MDSSSTLALSVLVMLFPGLNGFEESISLLPETTLTTINKL-VGPVLSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTLFSCSFVWVEGGAHN---FA
        M SS TLALS+L++    L   + SI + P TT+  +N++  G  ++VHC+SK++DLGVHVL     YSF FRPN+ GTTLF CSF W   G H    F 
Subjt:  MDSSSTLALSVLVMLFPGLNGFEESISLLPETTLTTINKL-VGPVLSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTLFSCSFVWVEGGAHN---FA

Query:  IYDFHRDANRCTDCRWEIYRDGPCLLHPKDTGTYNVCF
        I+D  RDA +CT CRW I+    CL  PK+ G  ++C+
Subjt:  IYDFHRDANRCTDCRWEIYRDGPCLLHPKDTGTYNVCF

KAA0046095.1 self-incompatibility protein 1 [Cucumis melo var. makuwa]1.9e-3656.69Show/hide
Query:  LVMLFP-GLNGFEESISLLPETTLTTINKLVGPVLSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDANRCTDC
        + +L P  L+  +E ISLLPETT+  +N++ GP+L +HCRSK +DLGV+V+ P+ SYSF F PN+WGTTLF C F WV+G  H F IYDF RD   CT+C
Subjt:  LVMLFP-GLNGFEESISLLPETTLTTINKLVGPVLSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDANRCTDC

Query:  RWEIYRDGPCLLHPKDTGTYNVCFPWN
        RW IY  GPCL H K + T   CFPWN
Subjt:  RWEIYRDGPCLLHPKDTGTYNVCFPWN

KAA0046284.1 self-incompatibility protein 1 [Cucumis melo var. makuwa]4.3e-3658.47Show/hide
Query:  NGFEESISLLPETTLTTINKLVGPVLSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDANRCTDCRWEIYRDGP
        +G  E ISLLPETT+T +N++ GP+L +HCRSK +DLGV+V+  + SYSF FRPN+WGTTLF C F WV+G  H F IYDF RD   CT+CRW +Y  GP
Subjt:  NGFEESISLLPETTLTTINKLVGPVLSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDANRCTDCRWEIYRDGP

Query:  CLLHPKDTGTYNVCFPWN
        CL H + + T   CFPWN
Subjt:  CLLHPKDTGTYNVCFPWN

TrEMBL top hitse value%identityAlignment
A0A5A7TT98 S-protein homolog2.1e-3658.47Show/hide
Query:  NGFEESISLLPETTLTTINKLVGPVLSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDANRCTDCRWEIYRDGP
        +G  E ISLLPETT+T +N++ GP+L +HCRSK +DLGV+V+  + SYSF FRPN+WGTTLF C F WV+G  H F IYDF RD   CT+CRW +Y  GP
Subjt:  NGFEESISLLPETTLTTINKLVGPVLSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDANRCTDCRWEIYRDGP

Query:  CLLHPKDTGTYNVCFPWN
        CL H + + T   CFPWN
Subjt:  CLLHPKDTGTYNVCFPWN

A0A5A7TWM4 Putative mitochondrial protein6.2e-2547.1Show/hide
Query:  MDSSSTLALSVLVMLFPGLNGFEESISLLPETTLTTINKL-VGPVLSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTLFSCSFVWVEGGAHN---FA
        M SS TLALS+L++    L   + SI + P TT+  +N++  G  ++VHC+SK++DLGVHVL     YSF FRPN+ GTTLF CSF W   G H    F 
Subjt:  MDSSSTLALSVLVMLFPGLNGFEESISLLPETTLTTINKL-VGPVLSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTLFSCSFVWVEGGAHN---FA

Query:  IYDFHRDANRCTDCRWEIYRDGPCLLHPKDTGTYNVCF
        I+D  RDA +CT CRW I+    CL  PK+ G  ++C+
Subjt:  IYDFHRDANRCTDCRWEIYRDGPCLLHPKDTGTYNVCF

A0A5A7TXE8 S-protein homolog9.3e-3756.69Show/hide
Query:  LVMLFP-GLNGFEESISLLPETTLTTINKLVGPVLSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDANRCTDC
        + +L P  L+  +E ISLLPETT+  +N++ GP+L +HCRSK +DLGV+V+ P+ SYSF F PN+WGTTLF C F WV+G  H F IYDF RD   CT+C
Subjt:  LVMLFP-GLNGFEESISLLPETTLTTINKLVGPVLSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDANRCTDC

Query:  RWEIYRDGPCLLHPKDTGTYNVCFPWN
        RW IY  GPCL H K + T   CFPWN
Subjt:  RWEIYRDGPCLLHPKDTGTYNVCFPWN

B0F817 S-protein homolog1.7e-3855.47Show/hide
Query:  MDSSSTLALSVLVMLFPGLNGFEESISLLPETTLTTINKLVGPVLSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTLFSCSFVWVEGGAHNFAIYDF
        M SS  L  S+ ++L   L+  +E ISLLPETT+T +N++ GP+L +HCRSK +DLGV+V+  + SYSF FRPNVWGTTLF C F WV+G  H F IYDF
Subjt:  MDSSSTLALSVLVMLFPGLNGFEESISLLPETTLTTINKLVGPVLSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTLFSCSFVWVEGGAHNFAIYDF

Query:  HRDANRCTDCRWEIYRDGPCLLHPKDTGTYNVCFPWN
         RD   CT+CRW +Y  GPCL H + + T   CFPWN
Subjt:  HRDANRCTDCRWEIYRDGPCLLHPKDTGTYNVCFPWN

B0F818 S-protein homolog2.4e-3755.73Show/hide
Query:  LALSVLVMLFPGLNGFEESISLLPETTLTTINKLVGPVLSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDANR
        L  S+ ++L   L+  +E ISLLPETT+T +N++ GP+L +HCRSK +DLGV+V+  + SYSF FRPNVWGTTLF C F WV+G  H F IYDF RD   
Subjt:  LALSVLVMLFPGLNGFEESISLLPETTLTTINKLVGPVLSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDANR

Query:  CTDCRWEIYRDGPCLLHPKDTGTYNVCFPWN
        CT+CRW +Y  GPCL H + + T   CFPWN
Subjt:  CTDCRWEIYRDGPCLLHPKDTGTYNVCFPWN

SwissProt top hitse value%identityAlignment
F4JLQ5 S-protein homolog 29.3e-1841.18Show/hide
Query:  SLLPETTLTT-INKLVGPVLSV--HCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDA---NRCTD--CRWEIYRDG
        S+ P +  T  IN  +G  L++  HC+SKD+DLG   L P  S+SF+F    +G TL+ CSF W    +H+F IY  HRD+   N+C    C W+I R+G
Subjt:  SLLPETTLTT-INKLVGPVLSV--HCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDA---NRCTD--CRWEIYRDG

Query:  PCLLHPKDTGTYNVCFPWN
        PC  +  +T  +++C+PWN
Subjt:  PCLLHPKDTGTYNVCFPWN

F4JZG1 S-protein homolog 46.0e-1742.48Show/hide
Query:  ETTLTTINKL-VGPVLSVHCRSKDNDLGVHVLDPETSYSFTFRPN-VWGTTLFSCSFVWVEGGAHNFAIYDFHRDANR----CTDCRWEIYRDGPCLLHP
        ++ +T  N+L  G  L +HC+S D+DLG+ +L P  S+SF FRP+ V G TLF C F W  G +  F IYD  RD  R    C  C W+I + GPC    
Subjt:  ETTLTTINKL-VGPVLSVHCRSKDNDLGVHVLDPETSYSFTFRPN-VWGTTLFSCSFVWVEGGAHNFAIYDFHRDANR----CTDCRWEIYRDGPCLLHP

Query:  KDTGTYNVCFPWN
         D   +N+C+ WN
Subjt:  KDTGTYNVCFPWN

O23020 S-protein homolog 51.1e-2347.62Show/hide
Query:  TTLTTINKLVGPVLSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDANRCTDCRWEIYRDGPCLLHPKDTGTYN
        T +T  N + GP L++HC+SK +DLG+HV+  +  Y F F+PN+W +TLF CSF W +    +F IYD  RD   C DC+WEI  DGPC L     G   
Subjt:  TTLTTINKLVGPVLSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDANRCTDCRWEIYRDGPCLLHPKDTGTYN

Query:  VCFPW
         CFPW
Subjt:  VCFPW

P0DN93 S-protein homolog 292.1e-1432.24Show/hide
Query:  MDSSSTLALSVLVMLF------PGLNGFEESI-----SLLPETTLTTINKLVGPVLSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTLFSCSFVWVE
        M +SS + + + ++LF       G N F +++     ++ P+TTLT           + CRSKD+DLG H+L    ++ + FRP+ + TTLF+C F+W  
Subjt:  MDSSSTLALSVLVMLF------PGLNGFEESI-----SLLPETTLTTINKLVGPVLSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTLFSCSFVWVE

Query:  GGAHNFAIYDFHRDANRCTDCRWEIYRDGPCLLHPKDTGTYNV----CFPWN
             F  Y   RD   C  C W I  D  C+     +G +N     C+PWN
Subjt:  GGAHNFAIYDFHRDANRCTDCRWEIYRDGPCLLHPKDTGTYNV----CFPWN

Q9FMQ4 S-protein homolog 34.9e-1944Show/hide
Query:  GPVLSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDANR----CTDCRWEIYRDGPCLLHPKDTGTYNVCFPWN
        G  L++HC+S D+DLG+ +L P  S+SF FR ++ GTTLF C F W  G +  F IYD  RD  R    C +C W+I   GPC+    D   +N+C+ WN
Subjt:  GPVLSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDANR----CTDCRWEIYRDGPCLLHPKDTGTYNVCFPWN

Arabidopsis top hitse value%identityAlignment
AT1G04645.1 Plant self-incompatibility protein S1 family8.1e-2547.62Show/hide
Query:  TTLTTINKLVGPVLSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDANRCTDCRWEIYRDGPCLLHPKDTGTYN
        T +T  N + GP L++HC+SK +DLG+HV+  +  Y F F+PN+W +TLF CSF W +    +F IYD  RD   C DC+WEI  DGPC L     G   
Subjt:  TTLTTINKLVGPVLSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDANRCTDCRWEIYRDGPCLLHPKDTGTYN

Query:  VCFPW
         CFPW
Subjt:  VCFPW

AT3G16970.1 Plant self-incompatibility protein S1 family4.6e-2042.48Show/hide
Query:  PETTLTTINKLVGPV-LSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDAN----RCTDCRWEIYRDGPCLLHP
        P TT+   N L G + L  HC+SK++DLG   +    ++SF FRP+V+G TLF C F+W +   H F IY   RD       C  C W+I +DGPC L+ 
Subjt:  PETTLTTINKLVGPV-LSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDAN----RCTDCRWEIYRDGPCLLHP

Query:  KDTGTYNVCFPWN
        K++  ++VC PWN
Subjt:  KDTGTYNVCFPWN

AT4G16195.1 Plant self-incompatibility protein S1 family6.6e-1941.18Show/hide
Query:  SLLPETTLTT-INKLVGPVLSV--HCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDA---NRCTD--CRWEIYRDG
        S+ P +  T  IN  +G  L++  HC+SKD+DLG   L P  S+SF+F    +G TL+ CSF W    +H+F IY  HRD+   N+C    C W+I R+G
Subjt:  SLLPETTLTT-INKLVGPVLSV--HCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDA---NRCTD--CRWEIYRDG

Query:  PCLLHPKDTGTYNVCFPWN
        PC  +  +T  +++C+PWN
Subjt:  PCLLHPKDTGTYNVCFPWN

AT5G12060.1 Plant self-incompatibility protein S1 family3.5e-2044Show/hide
Query:  GPVLSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDANR----CTDCRWEIYRDGPCLLHPKDTGTYNVCFPWN
        G  L++HC+S D+DLG+ +L P  S+SF FR ++ GTTLF C F W  G +  F IYD  RD  R    C +C W+I   GPC+    D   +N+C+ WN
Subjt:  GPVLSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDANR----CTDCRWEIYRDGPCLLHPKDTGTYNVCFPWN

AT5G12070.1 Plant self-incompatibility protein S1 family4.3e-1842.48Show/hide
Query:  ETTLTTINKL-VGPVLSVHCRSKDNDLGVHVLDPETSYSFTFRPN-VWGTTLFSCSFVWVEGGAHNFAIYDFHRDANR----CTDCRWEIYRDGPCLLHP
        ++ +T  N+L  G  L +HC+S D+DLG+ +L P  S+SF FRP+ V G TLF C F W  G +  F IYD  RD  R    C  C W+I + GPC    
Subjt:  ETTLTTINKL-VGPVLSVHCRSKDNDLGVHVLDPETSYSFTFRPN-VWGTTLFSCSFVWVEGGAHNFAIYDFHRDANR----CTDCRWEIYRDGPCLLHP

Query:  KDTGTYNVCFPWN
         D   +N+C+ WN
Subjt:  KDTGTYNVCFPWN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTCATCGTCAACACTAGCACTTTCCGTCTTGGTAATGTTATTTCCAGGTCTAAATGGTTTTGAAGAATCAATCTCACTTCTGCCAGAAACTACATTGACAACTAT
TAATAAACTGGTCGGCCCAGTGTTGAGCGTTCACTGTAGATCAAAGGATAATGACTTGGGAGTCCATGTTTTAGATCCAGAAACAAGCTACTCCTTTACCTTTAGACCCA
ATGTTTGGGGCACAACGTTATTTTCTTGTAGCTTTGTATGGGTGGAAGGTGGGGCCCACAACTTCGCTATCTATGACTTTCACAGAGATGCAAATCGTTGCACTGATTGC
AGATGGGAAATTTATCGAGATGGCCCTTGTTTGTTGCACCCGAAAGACACTGGAACTTATAATGTTTGCTTTCCTTGGAACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATTCATCGTCAACACTAGCACTTTCCGTCTTGGTAATGTTATTTCCAGGTCTAAATGGTTTTGAAGAATCAATCTCACTTCTGCCAGAAACTACATTGACAACTAT
TAATAAACTGGTCGGCCCAGTGTTGAGCGTTCACTGTAGATCAAAGGATAATGACTTGGGAGTCCATGTTTTAGATCCAGAAACAAGCTACTCCTTTACCTTTAGACCCA
ATGTTTGGGGCACAACGTTATTTTCTTGTAGCTTTGTATGGGTGGAAGGTGGGGCCCACAACTTCGCTATCTATGACTTTCACAGAGATGCAAATCGTTGCACTGATTGC
AGATGGGAAATTTATCGAGATGGCCCTTGTTTGTTGCACCCGAAAGACACTGGAACTTATAATGTTTGCTTTCCTTGGAACTAG
Protein sequenceShow/hide protein sequence
MDSSSTLALSVLVMLFPGLNGFEESISLLPETTLTTINKLVGPVLSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDANRCTDC
RWEIYRDGPCLLHPKDTGTYNVCFPWN