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Tan0003788 (gene) of Snake gourd v1 genome

Gene IDTan0003788
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionPlant self-incompatibility protein S1 family
Genome locationLG09:31027997..31028410
RNA-Seq ExpressionTan0003788
SyntenyTan0003788
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ABY56091.1 self-incompatibility protein 1 [Cucumis melo]4.1e-3957.66Show/hide
Query:  MDSSSTLALSVLLMLFTSLNGFEESISLLPETTVTTINKLAGPVLSVHCRSKDNDLGVHVLDRETSYSFTFRPNVWGTTLFSCSFVWVEGGAHNFAIYDF
        M SS  L  S+ L+L  SL+  +E ISLLPETTVT +N++ GP+L +HCRSK +DLGV+V+  + SYSF FRPNVWGTTLF C F WV+G  H F IYDF
Subjt:  MDSSSTLALSVLLMLFTSLNGFEESISLLPETTVTTINKLAGPVLSVHCRSKDNDLGVHVLDRETSYSFTFRPNVWGTTLFSCSFVWVEGGAHNFAIYDF

Query:  HRDANRCTDCRWEIYRDGPCLLHPKDTGTYNVCFPWN
         RD   CT+CRW +Y  GPCL H + + T   CFPWN
Subjt:  HRDANRCTDCRWEIYRDGPCLLHPKDTGTYNVCFPWN

ABY56092.1 self-incompatibility protein 2 [Cucumis melo]3.5e-3858.02Show/hide
Query:  LALSVLLMLFTSLNGFEESISLLPETTVTTINKLAGPVLSVHCRSKDNDLGVHVLDRETSYSFTFRPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDANR
        L  S+ L+L  SL+  +E ISLLPETTVT +N++ GP+L +HCRSK +DLGV+V+  + SYSF FRPNVWGTTLF C F WV+G  H F IYDF RD   
Subjt:  LALSVLLMLFTSLNGFEESISLLPETTVTTINKLAGPVLSVHCRSKDNDLGVHVLDRETSYSFTFRPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDANR

Query:  CTDCRWEIYRDGPCLLHPKDTGTYNVCFPWN
        CT+CRW +Y  GPCL H + + T   CFPWN
Subjt:  CTDCRWEIYRDGPCLLHPKDTGTYNVCFPWN

KAA0045871.1 putative mitochondrial protein [Cucumis melo var. makuwa]1.7e-2447.83Show/hide
Query:  MDSSSTLALSVLLMLFTSLNGFEESISLLPETTVTTINKLA-GPVLSVHCRSKDNDLGVHVLDRETSYSFTFRPNVWGTTLFSCSFVWVEGGAHN---FA
        M SS TLALS+L++   +L   + SI + P TTV  +N++  G  ++VHC+SK++DLGVHVL     YSF FRPN+ GTTLF CSF W   G H    F 
Subjt:  MDSSSTLALSVLLMLFTSLNGFEESISLLPETTVTTINKLA-GPVLSVHCRSKDNDLGVHVLDRETSYSFTFRPNVWGTTLFSCSFVWVEGGAHN---FA

Query:  IYDFHRDANRCTDCRWEIYRDGPCLLHPKDTGTYNVCF
        I+D  RDA +CT CRW I+    CL  PK+ G  ++C+
Subjt:  IYDFHRDANRCTDCRWEIYRDGPCLLHPKDTGTYNVCF

KAA0046095.1 self-incompatibility protein 1 [Cucumis melo var. makuwa]1.5e-3657.48Show/hide
Query:  VLLMLFTSLNGFEESISLLPETTVTTINKLAGPVLSVHCRSKDNDLGVHVLDRETSYSFTFRPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDANRCTDC
        + L+L  SL+  +E ISLLPETTV  +N++ GP+L +HCRSK +DLGV+V+  + SYSF F PN+WGTTLF C F WV+G  H F IYDF RD   CT+C
Subjt:  VLLMLFTSLNGFEESISLLPETTVTTINKLAGPVLSVHCRSKDNDLGVHVLDRETSYSFTFRPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDANRCTDC

Query:  RWEIYRDGPCLLHPKDTGTYNVCFPWN
        RW IY  GPCL H K + T   CFPWN
Subjt:  RWEIYRDGPCLLHPKDTGTYNVCFPWN

KAA0046284.1 self-incompatibility protein 1 [Cucumis melo var. makuwa]3.9e-3759.5Show/hide
Query:  TSLNGFEESISLLPETTVTTINKLAGPVLSVHCRSKDNDLGVHVLDRETSYSFTFRPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDANRCTDCRWEIYR
        TS +G  E ISLLPETTVT +N++ GP+L +HCRSK +DLGV+V+  + SYSF FRPN+WGTTLF C F WV+G  H F IYDF RD   CT+CRW +Y 
Subjt:  TSLNGFEESISLLPETTVTTINKLAGPVLSVHCRSKDNDLGVHVLDRETSYSFTFRPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDANRCTDCRWEIYR

Query:  DGPCLLHPKDTGTYNVCFPWN
         GPCL H + + T   CFPWN
Subjt:  DGPCLLHPKDTGTYNVCFPWN

TrEMBL top hitse value%identityAlignment
A0A5A7TT98 S-protein homolog1.9e-3759.5Show/hide
Query:  TSLNGFEESISLLPETTVTTINKLAGPVLSVHCRSKDNDLGVHVLDRETSYSFTFRPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDANRCTDCRWEIYR
        TS +G  E ISLLPETTVT +N++ GP+L +HCRSK +DLGV+V+  + SYSF FRPN+WGTTLF C F WV+G  H F IYDF RD   CT+CRW +Y 
Subjt:  TSLNGFEESISLLPETTVTTINKLAGPVLSVHCRSKDNDLGVHVLDRETSYSFTFRPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDANRCTDCRWEIYR

Query:  DGPCLLHPKDTGTYNVCFPWN
         GPCL H + + T   CFPWN
Subjt:  DGPCLLHPKDTGTYNVCFPWN

A0A5A7TWM4 Putative mitochondrial protein8.2e-2547.83Show/hide
Query:  MDSSSTLALSVLLMLFTSLNGFEESISLLPETTVTTINKLA-GPVLSVHCRSKDNDLGVHVLDRETSYSFTFRPNVWGTTLFSCSFVWVEGGAHN---FA
        M SS TLALS+L++   +L   + SI + P TTV  +N++  G  ++VHC+SK++DLGVHVL     YSF FRPN+ GTTLF CSF W   G H    F 
Subjt:  MDSSSTLALSVLLMLFTSLNGFEESISLLPETTVTTINKLA-GPVLSVHCRSKDNDLGVHVLDRETSYSFTFRPNVWGTTLFSCSFVWVEGGAHN---FA

Query:  IYDFHRDANRCTDCRWEIYRDGPCLLHPKDTGTYNVCF
        I+D  RDA +CT CRW I+    CL  PK+ G  ++C+
Subjt:  IYDFHRDANRCTDCRWEIYRDGPCLLHPKDTGTYNVCF

A0A5A7TXE8 S-protein homolog7.1e-3757.48Show/hide
Query:  VLLMLFTSLNGFEESISLLPETTVTTINKLAGPVLSVHCRSKDNDLGVHVLDRETSYSFTFRPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDANRCTDC
        + L+L  SL+  +E ISLLPETTV  +N++ GP+L +HCRSK +DLGV+V+  + SYSF F PN+WGTTLF C F WV+G  H F IYDF RD   CT+C
Subjt:  VLLMLFTSLNGFEESISLLPETTVTTINKLAGPVLSVHCRSKDNDLGVHVLDRETSYSFTFRPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDANRCTDC

Query:  RWEIYRDGPCLLHPKDTGTYNVCFPWN
        RW IY  GPCL H K + T   CFPWN
Subjt:  RWEIYRDGPCLLHPKDTGTYNVCFPWN

B0F817 S-protein homolog2.0e-3957.66Show/hide
Query:  MDSSSTLALSVLLMLFTSLNGFEESISLLPETTVTTINKLAGPVLSVHCRSKDNDLGVHVLDRETSYSFTFRPNVWGTTLFSCSFVWVEGGAHNFAIYDF
        M SS  L  S+ L+L  SL+  +E ISLLPETTVT +N++ GP+L +HCRSK +DLGV+V+  + SYSF FRPNVWGTTLF C F WV+G  H F IYDF
Subjt:  MDSSSTLALSVLLMLFTSLNGFEESISLLPETTVTTINKLAGPVLSVHCRSKDNDLGVHVLDRETSYSFTFRPNVWGTTLFSCSFVWVEGGAHNFAIYDF

Query:  HRDANRCTDCRWEIYRDGPCLLHPKDTGTYNVCFPWN
         RD   CT+CRW +Y  GPCL H + + T   CFPWN
Subjt:  HRDANRCTDCRWEIYRDGPCLLHPKDTGTYNVCFPWN

B0F818 S-protein homolog1.7e-3858.02Show/hide
Query:  LALSVLLMLFTSLNGFEESISLLPETTVTTINKLAGPVLSVHCRSKDNDLGVHVLDRETSYSFTFRPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDANR
        L  S+ L+L  SL+  +E ISLLPETTVT +N++ GP+L +HCRSK +DLGV+V+  + SYSF FRPNVWGTTLF C F WV+G  H F IYDF RD   
Subjt:  LALSVLLMLFTSLNGFEESISLLPETTVTTINKLAGPVLSVHCRSKDNDLGVHVLDRETSYSFTFRPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDANR

Query:  CTDCRWEIYRDGPCLLHPKDTGTYNVCFPWN
        CT+CRW +Y  GPCL H + + T   CFPWN
Subjt:  CTDCRWEIYRDGPCLLHPKDTGTYNVCFPWN

SwissProt top hitse value%identityAlignment
F4JLQ5 S-protein homolog 21.3e-1641.44Show/hide
Query:  TVTTINKLAGPV-LSVHCRSKDNDLGVHVLDRETSYSFTFRPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDA---NRCTD--CRWEIYRDGPCLLHPKD
        TV   N L   + L  HC+SKD+DLG   L    S+SF+F    +G TL+ CSF W    +H+F IY  HRD+   N+C    C W+I R+GPC  +  +
Subjt:  TVTTINKLAGPV-LSVHCRSKDNDLGVHVLDRETSYSFTFRPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDA---NRCTD--CRWEIYRDGPCLLHPKD

Query:  TGTYNVCFPWN
        T  +++C+PWN
Subjt:  TGTYNVCFPWN

F4JZG1 S-protein homolog 41.3e-1642.48Show/hide
Query:  ETTVTTINKLA-GPVLSVHCRSKDNDLGVHVLDRETSYSFTFRPN-VWGTTLFSCSFVWVEGGAHNFAIYDFHRDANR----CTDCRWEIYRDGPCLLHP
        ++ VT  N+L  G  L +HC+S D+DLG+ +L    S+SF FRP+ V G TLF C F W  G +  F IYD  RD  R    C  C W+I + GPC    
Subjt:  ETTVTTINKLA-GPVLSVHCRSKDNDLGVHVLDRETSYSFTFRPN-VWGTTLFSCSFVWVEGGAHNFAIYDFHRDANR----CTDCRWEIYRDGPCLLHP

Query:  KDTGTYNVCFPWN
         D   +N+C+ WN
Subjt:  KDTGTYNVCFPWN

O23020 S-protein homolog 51.8e-2448.57Show/hide
Query:  TTVTTINKLAGPVLSVHCRSKDNDLGVHVLDRETSYSFTFRPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDANRCTDCRWEIYRDGPCLLHPKDTGTYN
        T VT  N + GP L++HC+SK +DLG+HV+  +  Y F F+PN+W +TLF CSF W +    +F IYD  RD   C DC+WEI  DGPC L     G   
Subjt:  TTVTTINKLAGPVLSVHCRSKDNDLGVHVLDRETSYSFTFRPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDANRCTDCRWEIYRDGPCLLHPKDTGTYN

Query:  VCFPW
         CFPW
Subjt:  VCFPW

P0DN93 S-protein homolog 291.3e-1433.1Show/hide
Query:  MDSSSTLALSVLLMLF---TSLNGFEESISLLPETTVTTINKLA-GPVLSVHCRSKDNDLGVHVLDRETSYSFTFRPNVWGTTLFSCSFVWVEGGAHNFA
        M +SS + + + ++LF   +S +G+        +T VT  N ++    L++ CRSKD+DLG H+L    ++ + FRP+ + TTLF+C F+W       F 
Subjt:  MDSSSTLALSVLLMLF---TSLNGFEESISLLPETTVTTINKLA-GPVLSVHCRSKDNDLGVHVLDRETSYSFTFRPNVWGTTLFSCSFVWVEGGAHNFA

Query:  IYDFHRDANRCTDCRWEIYRDGPCLLHPKDTGTYNV----CFPWN
         Y   RD   C  C W I  D  C+     +G +N     C+PWN
Subjt:  IYDFHRDANRCTDCRWEIYRDGPCLLHPKDTGTYNV----CFPWN

Q9FMQ4 S-protein homolog 34.2e-1842.2Show/hide
Query:  VTTINKLA-GPVLSVHCRSKDNDLGVHVLDRETSYSFTFRPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDANR----CTDCRWEIYRDGPCLLHPKDTG
        V   N+L  G  L++HC+S D+DLG+ +L    S+SF FR ++ GTTLF C F W  G +  F IYD  RD  R    C +C W+I   GPC+    D  
Subjt:  VTTINKLA-GPVLSVHCRSKDNDLGVHVLDRETSYSFTFRPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDANR----CTDCRWEIYRDGPCLLHPKDTG

Query:  TYNVCFPWN
         +N+C+ WN
Subjt:  TYNVCFPWN

Arabidopsis top hitse value%identityAlignment
AT1G04645.1 Plant self-incompatibility protein S1 family1.2e-2548.57Show/hide
Query:  TTVTTINKLAGPVLSVHCRSKDNDLGVHVLDRETSYSFTFRPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDANRCTDCRWEIYRDGPCLLHPKDTGTYN
        T VT  N + GP L++HC+SK +DLG+HV+  +  Y F F+PN+W +TLF CSF W +    +F IYD  RD   C DC+WEI  DGPC L     G   
Subjt:  TTVTTINKLAGPVLSVHCRSKDNDLGVHVLDRETSYSFTFRPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDANRCTDCRWEIYRDGPCLLHPKDTGTYN

Query:  VCFPW
         CFPW
Subjt:  VCFPW

AT3G16970.1 Plant self-incompatibility protein S1 family9.2e-2141.27Show/hide
Query:  TSLNGFEESISLLPETTVTTINKLAGPV-LSVHCRSKDNDLGVHVLDRETSYSFTFRPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDAN----RCTDCR
        T  +GF+      P TTV   N L G + L  HC+SK++DLG   +    ++SF FRP+V+G TLF C F+W +   H F IY   RD       C  C 
Subjt:  TSLNGFEESISLLPETTVTTINKLAGPV-LSVHCRSKDNDLGVHVLDRETSYSFTFRPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDAN----RCTDCR

Query:  WEIYRDGPCLLHPKDTGTYNVCFPWN
        W+I +DGPC L+ K++  ++VC PWN
Subjt:  WEIYRDGPCLLHPKDTGTYNVCFPWN

AT4G16195.1 Plant self-incompatibility protein S1 family9.5e-1841.44Show/hide
Query:  TVTTINKLAGPV-LSVHCRSKDNDLGVHVLDRETSYSFTFRPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDA---NRCTD--CRWEIYRDGPCLLHPKD
        TV   N L   + L  HC+SKD+DLG   L    S+SF+F    +G TL+ CSF W    +H+F IY  HRD+   N+C    C W+I R+GPC  +  +
Subjt:  TVTTINKLAGPV-LSVHCRSKDNDLGVHVLDRETSYSFTFRPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDA---NRCTD--CRWEIYRDGPCLLHPKD

Query:  TGTYNVCFPWN
        T  +++C+PWN
Subjt:  TGTYNVCFPWN

AT5G12060.1 Plant self-incompatibility protein S1 family3.0e-1942.2Show/hide
Query:  VTTINKLA-GPVLSVHCRSKDNDLGVHVLDRETSYSFTFRPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDANR----CTDCRWEIYRDGPCLLHPKDTG
        V   N+L  G  L++HC+S D+DLG+ +L    S+SF FR ++ GTTLF C F W  G +  F IYD  RD  R    C +C W+I   GPC+    D  
Subjt:  VTTINKLA-GPVLSVHCRSKDNDLGVHVLDRETSYSFTFRPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDANR----CTDCRWEIYRDGPCLLHPKDTG

Query:  TYNVCFPWN
         +N+C+ WN
Subjt:  TYNVCFPWN

AT5G12070.1 Plant self-incompatibility protein S1 family9.5e-1842.48Show/hide
Query:  ETTVTTINKLA-GPVLSVHCRSKDNDLGVHVLDRETSYSFTFRPN-VWGTTLFSCSFVWVEGGAHNFAIYDFHRDANR----CTDCRWEIYRDGPCLLHP
        ++ VT  N+L  G  L +HC+S D+DLG+ +L    S+SF FRP+ V G TLF C F W  G +  F IYD  RD  R    C  C W+I + GPC    
Subjt:  ETTVTTINKLA-GPVLSVHCRSKDNDLGVHVLDRETSYSFTFRPN-VWGTTLFSCSFVWVEGGAHNFAIYDFHRDANR----CTDCRWEIYRDGPCLLHP

Query:  KDTGTYNVCFPWN
         D   +N+C+ WN
Subjt:  KDTGTYNVCFPWN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTCATCGTCAACACTAGCACTTTCTGTCTTGCTAATGTTATTTACAAGTCTAAATGGTTTTGAAGAATCAATCTCACTTCTTCCAGAAACTACAGTGACAACGAT
TAATAAACTGGCCGGCCCAGTGTTGAGCGTTCACTGTAGATCAAAGGATAATGACTTGGGAGTCCATGTTTTAGATCGGGAAACAAGCTACTCCTTTACCTTTAGACCCA
ATGTTTGGGGGACAACGTTGTTTTCTTGTAGTTTTGTATGGGTGGAAGGTGGGGCCCACAACTTCGCTATCTATGACTTTCACAGAGATGCAAATCGTTGCACTGATTGC
AGATGGGAAATTTATCGAGATGGCCCTTGTTTGTTGCACCCGAAAGACACTGGAACTTATAATGTTTGCTTTCCTTGGAACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATTCATCGTCAACACTAGCACTTTCTGTCTTGCTAATGTTATTTACAAGTCTAAATGGTTTTGAAGAATCAATCTCACTTCTTCCAGAAACTACAGTGACAACGAT
TAATAAACTGGCCGGCCCAGTGTTGAGCGTTCACTGTAGATCAAAGGATAATGACTTGGGAGTCCATGTTTTAGATCGGGAAACAAGCTACTCCTTTACCTTTAGACCCA
ATGTTTGGGGGACAACGTTGTTTTCTTGTAGTTTTGTATGGGTGGAAGGTGGGGCCCACAACTTCGCTATCTATGACTTTCACAGAGATGCAAATCGTTGCACTGATTGC
AGATGGGAAATTTATCGAGATGGCCCTTGTTTGTTGCACCCGAAAGACACTGGAACTTATAATGTTTGCTTTCCTTGGAACTAG
Protein sequenceShow/hide protein sequence
MDSSSTLALSVLLMLFTSLNGFEESISLLPETTVTTINKLAGPVLSVHCRSKDNDLGVHVLDRETSYSFTFRPNVWGTTLFSCSFVWVEGGAHNFAIYDFHRDANRCTDC
RWEIYRDGPCLLHPKDTGTYNVCFPWN