| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0026233.1 gag/pol protein [Cucumis melo var. makuwa] | 2.5e-126 | 57.02 | Show/hide |
Query: MKVHFNIAESNGASIDESSQVSIILETLPDSFLQFRSNVVMNKL-FNLTSLLNELQTFQSLIKIQGSKGEANVA--SRSYHRGSTSGTKIVASSSSNLRG
M VHFN+A N A IDE+SQVS ILE+LP+SFLQFRSN VMNK+ + LT+LLNELQTF+SL+KI+G KGEANVA +R +HRGSTSGTK + SSS N +
Subjt: MKVHFNIAESNGASIDESSQVSIILETLPDSFLQFRSNVVMNKL-FNLTSLLNELQTFQSLIKIQGSKGEANVA--SRSYHRGSTSGTKIVASSSSNLRG
Query: KKKNMKKVSKGKQADKVVAQKGKKVKDVVDKGKCFHCNKDGHWKRNCPKYIAEKKK--------------------------------------------
KK KK +G +A+ A+ KK K KG CF CN++GHWKRNCPKY+A+KKK
Subjt: KKKNMKKVSKGKQADKVVAQKGKKVKDVVDKGKCFHCNKDGHWKRNCPKYIAEKKK--------------------------------------------
Query: ---EDDYSRYGPIYLMHHKSEALEKFKEFKGEVENQLGKRVKTLRSDR-----------------------APGTPQQNGVSERRNRTLLDMVRSMMSYA
DDYSRYG +YLM HKSEALEKFKE+K EVEN L K +KT RSDR AP TPQQNGVSERRNRTLLDMVRSMMSYA
Subjt: ---EDDYSRYGPIYLMHHKSEALEKFKEFKGEVENQLGKRVKTLRSDR-----------------------APGTPQQNGVSERRNRTLLDMVRSMMSYA
Query: HLPSSFWGYAVETPVYILNSVPSKSVSETPFELWKGRKGSLRHFRIWGCPAHVLVTNPKKLDSRLKLCLLVGYQKETRGGLFYDPKEDKVFVSTNATFLK
HLP+SFWGYAV+T VYILN VPSKSVSETP +LW G KGSLRHFRIWGCPAHVL NPKKL+ R KLCL VGY K TRGG FYDPK++KVFVSTNATFL+
Subjt: HLPSSFWGYAVETPVYILNSVPSKSVSETPFELWKGRKGSLRHFRIWGCPAHVLVTNPKKLDSRLKLCLLVGYQKETRGGLFYDPKEDKVFVSTNATFLK
Query: EDHIRDHKPKCKVVLSALDGRLAKVANK---NTSTSTTVVDTSLSSQESPSQELSMPRRSWRV
EDHIR+HKP+ K+VL+ L + + + S VV S++ Q L PRRS RV
Subjt: EDHIRDHKPKCKVVLSALDGRLAKVANK---NTSTSTTVVDTSLSSQESPSQELSMPRRSWRV
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| KAA0051952.1 gag/pol protein [Cucumis melo var. makuwa] | 3.8e-130 | 57.67 | Show/hide |
Query: MKVHFNIAESNGASIDESSQVSIILETLPDSFLQFRSNVVMNKL-FNLTSLLNELQTFQSLIKIQGSKGEANVA--SRSYHRGSTSGTKIVASSSSNLRG
M VHFN+AE NGA IDE+SQVS ILE+LP+SFLQFRSN VMNK+ + LT+LLNELQTF+SL+KI+G KGEANVA +R +HRGSTSGTK + SSS N +
Subjt: MKVHFNIAESNGASIDESSQVSIILETLPDSFLQFRSNVVMNKL-FNLTSLLNELQTFQSLIKIQGSKGEANVA--SRSYHRGSTSGTKIVASSSSNLRG
Query: KKKNMKKVSKGKQADKVVAQKGKKVKDVVDKGKCFHCNKDGHWKRNCPKYIAEKKK--------------------------------------------
KK KK +G +A+ A+ KK K KG CFHCN++GHWKRNCPKY+AEKKK
Subjt: KKKNMKKVSKGKQADKVVAQKGKKVKDVVDKGKCFHCNKDGHWKRNCPKYIAEKKK--------------------------------------------
Query: ---EDDYSRYGPIYLMHHKSEALEKFKEFKGEVENQLGKRVKTLRSDR-----------------------APGTPQQNGVSERRNRTLLDMVRSMMSYA
DDYSRYG +YLM HKSEALEKFKE+K EVEN L K +KT RSDR PGTPQQNGVS+RRNRTLLDMVRSMMSY
Subjt: ---EDDYSRYGPIYLMHHKSEALEKFKEFKGEVENQLGKRVKTLRSDR-----------------------APGTPQQNGVSERRNRTLLDMVRSMMSYA
Query: HLPSSFWGYAVETPVYILNSVPSKSVSETPFELWKGRKGSLRHFRIWGCPAHVLVTNPKKLDSRLKLCLLVGYQKETRGGLFYDPKEDKVFVSTNATFLK
HLP+SFWGYAV+T VYILN VPSKSVS+TP +LW GRKGSLRHFRIWGCPAHVL NPKKL+ R KLCL VGY K TRGG FYDPK++KVFVSTNATFL+
Subjt: HLPSSFWGYAVETPVYILNSVPSKSVSETPFELWKGRKGSLRHFRIWGCPAHVLVTNPKKLDSRLKLCLLVGYQKETRGGLFYDPKEDKVFVSTNATFLK
Query: EDHIRDHKPKCKVVLSALDGRLAKVANK---NTSTSTTVVDTSLSSQESPSQELSMPRRSWRV
EDHIR+HKP+ K+VL+ L + + + S T VV S++ Q L PRRS RV
Subjt: EDHIRDHKPKCKVVLSALDGRLAKVANK---NTSTSTTVVDTSLSSQESPSQELSMPRRSWRV
|
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| KAA0058447.1 gag/pol protein [Cucumis melo var. makuwa] | 3.9e-127 | 56.59 | Show/hide |
Query: MKVHFNIAESNGASIDESSQVSIILETLPDSFLQFRSNVVMNKL-FNLTSLLNELQTFQSLIKIQGSKGEANVA--SRSYHRGSTSGTKIVASSSSNLRG
M VHFN+ E NGA IDE+SQVS ILE+LP+SFLQFRSN VMNK+ + LT+LLNELQTF+SL+KI+G KGEANVA +R +H+GSTSGTK + SSS N
Subjt: MKVHFNIAESNGASIDESSQVSIILETLPDSFLQFRSNVVMNKL-FNLTSLLNELQTFQSLIKIQGSKGEANVA--SRSYHRGSTSGTKIVASSSSNLRG
Query: KKKNMKKVSKGKQADKVVAQKGKKVKDVVDKGKCFHCNKDGHWKRNCPKYIAEKKK--------------------------------------------
KK KK +G +A+ A+ KK K KG CFHCN++GHWKRNCPKY+AEKKK
Subjt: KKKNMKKVSKGKQADKVVAQKGKKVKDVVDKGKCFHCNKDGHWKRNCPKYIAEKKK--------------------------------------------
Query: ---EDDYSRYGPIYLMHHKSEALEKFKEFKGEVENQLGKRVKTLRSDR-----------------------APGTPQQNGVSERRNRTLLDMVRSMMSYA
DDYSRYG +YLM HK EALEKFKE+K +VEN L K +KT RSDR APGTPQQNGVSERRNRTLLDMV+SM+SYA
Subjt: ---EDDYSRYGPIYLMHHKSEALEKFKEFKGEVENQLGKRVKTLRSDR-----------------------APGTPQQNGVSERRNRTLLDMVRSMMSYA
Query: HLPSSFWGYAVETPVYILNSVPSKSVSETPFELWKGRKGSLRHFRIWGCPAHVLVTNPKKLDSRLKLCLLVGYQKETRGGLFYDPKEDKVFVSTNATFLK
HLP+SFWGYAV+T VYILN VPSKS SETP +LW G KGSLRHFRIWGCPAHVL NPKKL+ KLCL VGY K TRGG FYDPK++KVFVSTNATFL+
Subjt: HLPSSFWGYAVETPVYILNSVPSKSVSETPFELWKGRKGSLRHFRIWGCPAHVLVTNPKKLDSRLKLCLLVGYQKETRGGLFYDPKEDKVFVSTNATFLK
Query: EDHIRDHKPKCKVVLSALDGRLAKVANK---NTSTSTTVVDTSLSSQESPSQELSMPRRSWRV
EDHIR+HKP+ K+VL+ L + + + + S T VV S++ Q L PRRS RV
Subjt: EDHIRDHKPKCKVVLSALDGRLAKVANK---NTSTSTTVVDTSLSSQESPSQELSMPRRSWRV
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| KAA0066490.1 gag/pol protein [Cucumis melo var. makuwa] | 7.7e-123 | 60.58 | Show/hide |
Query: MKVHFNIAESNGASIDESSQVSIILETLPDSFLQFRSNVVMNKL-FNLTSLLNELQTFQSLIKIQGSKGEANVA--SRSYHRGSTSGTKIVASSSSNLRG
M VHF++AE NGA IDE+SQVS ILE+LP+SFLQFRSN VMNK+ + LT+LLNELQTF+SL+KI+G KGEANVA +R +HRGSTSGTK + SSS N +
Subjt: MKVHFNIAESNGASIDESSQVSIILETLPDSFLQFRSNVVMNKL-FNLTSLLNELQTFQSLIKIQGSKGEANVA--SRSYHRGSTSGTKIVASSSSNLRG
Query: KKKNMKKVSKGKQADKVVAQKGKKVKDVVDKGKCFHCNKDGHWKRNCPKYIAEKKKEDDYSRYGPIYLMHHKSEALEKFKEFKGEVENQLGKRVKTLRSD
KK KK +G +A+ A+ KK K KG CFHCN++GHWKRNCPKY+AEKKK +ALEKFKE+K EVEN L K +KT RSD
Subjt: KKKNMKKVSKGKQADKVVAQKGKKVKDVVDKGKCFHCNKDGHWKRNCPKYIAEKKKEDDYSRYGPIYLMHHKSEALEKFKEFKGEVENQLGKRVKTLRSD
Query: R-----------------------APGTPQQNGVSERRNRTLLDMVRSMMSYAHLPSSFWGYAVETPVYILNSVPSKSVSETPFELWKGRKGSLRHFRIW
R APGTPQQNGVSERRNRTL DMVRSMMSYAHLP+SFWGYAV+T VYILN VPSKSV ETP +LW GRKGSLRHFRIW
Subjt: R-----------------------APGTPQQNGVSERRNRTLLDMVRSMMSYAHLPSSFWGYAVETPVYILNSVPSKSVSETPFELWKGRKGSLRHFRIW
Query: GCPAHVLVTNPKKLDSRLKLCLLVGYQKETRGGLFYDPKEDKVFVSTNATFLKEDHIRDHKPKCKVVLSALDGRLAKVANK---NTSTSTTVVDTSLSSQ
GC AHVL NPKKL+ R KLCL VGY K TRGG FYDPK++KVFVSTNATFL+EDHIR+HKP+ K+VL+ L + + + S VV S++
Subjt: GCPAHVLVTNPKKLDSRLKLCLLVGYQKETRGGLFYDPKEDKVFVSTNATFLKEDHIRDHKPKCKVVLSALDGRLAKVANK---NTSTSTTVVDTSLSSQ
Query: ESPSQELSMPRRSWRV
Q L PRRS RV
Subjt: ESPSQELSMPRRSWRV
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| TYJ96910.1 gag/pol protein [Cucumis melo var. makuwa] | 1.7e-117 | 50.48 | Show/hide |
Query: MKVHFNIAESNGASIDESSQVSIILETLPDSFLQFRSNVVMNKL-FNLTSLLNELQTFQSLIKIQGSKGEANVA--SRSYHRGSTSGTKIVASSSSNLRG
M VHFN+AE NGA IDE+S+VS IL++LP+SFLQFRSNVVMNK+ + LT+LLNELQTF+SL+KI+G KGEANVA +R +HRGSTSGTK + SSS N +
Subjt: MKVHFNIAESNGASIDESSQVSIILETLPDSFLQFRSNVVMNKL-FNLTSLLNELQTFQSLIKIQGSKGEANVA--SRSYHRGSTSGTKIVASSSSNLRG
Query: KKKNMKKVSKGKQADKV---VAQKGKKVKDVVDKGKCFHCNKDGHWKRNCPKYIAEKKK-----------------------------------------
KK +KG Q +KV A+ KK K KG FHCN++GHWKRNCPKY+AEKKK
Subjt: KKKNMKKVSKGKQADKV---VAQKGKKVKDVVDKGKCFHCNKDGHWKRNCPKYIAEKKK-----------------------------------------
Query: -------------------------------------------------------------EDDYSRYGPIYLMHHKSEALEKFKEFKGEVENQLGKRVK
DDYSRYG +YLM HKSEALEKFKE+K EVEN L K +K
Subjt: -------------------------------------------------------------EDDYSRYGPIYLMHHKSEALEKFKEFKGEVENQLGKRVK
Query: TLRSDR-----------------------APGTPQQNGVSERRNRTLLDMVRSMMSYAHLPSSFWGYAVETPVYILNSVPSKSVSETPFELWKGRKGSLR
T RSDR APGTPQQNGVSERRN+TLLDMV SMMSYAHLP+SFWGYAV+T VYILN VPSKSVSETP +LW GRKGSL
Subjt: TLRSDR-----------------------APGTPQQNGVSERRNRTLLDMVRSMMSYAHLPSSFWGYAVETPVYILNSVPSKSVSETPFELWKGRKGSLR
Query: HFRIWGCPAHVLVTNPKKLDSRLKLCLLVGYQKETRGGLFYDPKEDKVFVSTNATFLKEDHIRDHKPKCKVVLSALDGRLAKVANK---NTSTSTTVVDT
HFRI GCPAHVL N KKL+ R KLCL VGY K +RGG FYDPK++KV VSTNATFL+EDHIR+HKP+ K+VL+ L + + + S T+VV
Subjt: HFRIWGCPAHVLVTNPKKLDSRLKLCLLVGYQKETRGGLFYDPKEDKVFVSTNATFLKEDHIRDHKPKCKVVLSALDGRLAKVANK---NTSTSTTVVDT
Query: SLSSQESPSQELSMPRRSWRV
S++ Q L PRRS RV
Subjt: SLSSQESPSQELSMPRRSWRV
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SNP8 Gag/pol protein | 1.2e-126 | 57.02 | Show/hide |
Query: MKVHFNIAESNGASIDESSQVSIILETLPDSFLQFRSNVVMNKL-FNLTSLLNELQTFQSLIKIQGSKGEANVA--SRSYHRGSTSGTKIVASSSSNLRG
M VHFN+A N A IDE+SQVS ILE+LP+SFLQFRSN VMNK+ + LT+LLNELQTF+SL+KI+G KGEANVA +R +HRGSTSGTK + SSS N +
Subjt: MKVHFNIAESNGASIDESSQVSIILETLPDSFLQFRSNVVMNKL-FNLTSLLNELQTFQSLIKIQGSKGEANVA--SRSYHRGSTSGTKIVASSSSNLRG
Query: KKKNMKKVSKGKQADKVVAQKGKKVKDVVDKGKCFHCNKDGHWKRNCPKYIAEKKK--------------------------------------------
KK KK +G +A+ A+ KK K KG CF CN++GHWKRNCPKY+A+KKK
Subjt: KKKNMKKVSKGKQADKVVAQKGKKVKDVVDKGKCFHCNKDGHWKRNCPKYIAEKKK--------------------------------------------
Query: ---EDDYSRYGPIYLMHHKSEALEKFKEFKGEVENQLGKRVKTLRSDR-----------------------APGTPQQNGVSERRNRTLLDMVRSMMSYA
DDYSRYG +YLM HKSEALEKFKE+K EVEN L K +KT RSDR AP TPQQNGVSERRNRTLLDMVRSMMSYA
Subjt: ---EDDYSRYGPIYLMHHKSEALEKFKEFKGEVENQLGKRVKTLRSDR-----------------------APGTPQQNGVSERRNRTLLDMVRSMMSYA
Query: HLPSSFWGYAVETPVYILNSVPSKSVSETPFELWKGRKGSLRHFRIWGCPAHVLVTNPKKLDSRLKLCLLVGYQKETRGGLFYDPKEDKVFVSTNATFLK
HLP+SFWGYAV+T VYILN VPSKSVSETP +LW G KGSLRHFRIWGCPAHVL NPKKL+ R KLCL VGY K TRGG FYDPK++KVFVSTNATFL+
Subjt: HLPSSFWGYAVETPVYILNSVPSKSVSETPFELWKGRKGSLRHFRIWGCPAHVLVTNPKKLDSRLKLCLLVGYQKETRGGLFYDPKEDKVFVSTNATFLK
Query: EDHIRDHKPKCKVVLSALDGRLAKVANK---NTSTSTTVVDTSLSSQESPSQELSMPRRSWRV
EDHIR+HKP+ K+VL+ L + + + S VV S++ Q L PRRS RV
Subjt: EDHIRDHKPKCKVVLSALDGRLAKVANK---NTSTSTTVVDTSLSSQESPSQELSMPRRSWRV
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| A0A5A7U869 Gag/pol protein | 1.8e-130 | 57.67 | Show/hide |
Query: MKVHFNIAESNGASIDESSQVSIILETLPDSFLQFRSNVVMNKL-FNLTSLLNELQTFQSLIKIQGSKGEANVA--SRSYHRGSTSGTKIVASSSSNLRG
M VHFN+AE NGA IDE+SQVS ILE+LP+SFLQFRSN VMNK+ + LT+LLNELQTF+SL+KI+G KGEANVA +R +HRGSTSGTK + SSS N +
Subjt: MKVHFNIAESNGASIDESSQVSIILETLPDSFLQFRSNVVMNKL-FNLTSLLNELQTFQSLIKIQGSKGEANVA--SRSYHRGSTSGTKIVASSSSNLRG
Query: KKKNMKKVSKGKQADKVVAQKGKKVKDVVDKGKCFHCNKDGHWKRNCPKYIAEKKK--------------------------------------------
KK KK +G +A+ A+ KK K KG CFHCN++GHWKRNCPKY+AEKKK
Subjt: KKKNMKKVSKGKQADKVVAQKGKKVKDVVDKGKCFHCNKDGHWKRNCPKYIAEKKK--------------------------------------------
Query: ---EDDYSRYGPIYLMHHKSEALEKFKEFKGEVENQLGKRVKTLRSDR-----------------------APGTPQQNGVSERRNRTLLDMVRSMMSYA
DDYSRYG +YLM HKSEALEKFKE+K EVEN L K +KT RSDR PGTPQQNGVS+RRNRTLLDMVRSMMSY
Subjt: ---EDDYSRYGPIYLMHHKSEALEKFKEFKGEVENQLGKRVKTLRSDR-----------------------APGTPQQNGVSERRNRTLLDMVRSMMSYA
Query: HLPSSFWGYAVETPVYILNSVPSKSVSETPFELWKGRKGSLRHFRIWGCPAHVLVTNPKKLDSRLKLCLLVGYQKETRGGLFYDPKEDKVFVSTNATFLK
HLP+SFWGYAV+T VYILN VPSKSVS+TP +LW GRKGSLRHFRIWGCPAHVL NPKKL+ R KLCL VGY K TRGG FYDPK++KVFVSTNATFL+
Subjt: HLPSSFWGYAVETPVYILNSVPSKSVSETPFELWKGRKGSLRHFRIWGCPAHVLVTNPKKLDSRLKLCLLVGYQKETRGGLFYDPKEDKVFVSTNATFLK
Query: EDHIRDHKPKCKVVLSALDGRLAKVANK---NTSTSTTVVDTSLSSQESPSQELSMPRRSWRV
EDHIR+HKP+ K+VL+ L + + + S T VV S++ Q L PRRS RV
Subjt: EDHIRDHKPKCKVVLSALDGRLAKVANK---NTSTSTTVVDTSLSSQESPSQELSMPRRSWRV
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| A0A5A7UUN7 Gag/pol protein | 1.9e-127 | 56.59 | Show/hide |
Query: MKVHFNIAESNGASIDESSQVSIILETLPDSFLQFRSNVVMNKL-FNLTSLLNELQTFQSLIKIQGSKGEANVA--SRSYHRGSTSGTKIVASSSSNLRG
M VHFN+ E NGA IDE+SQVS ILE+LP+SFLQFRSN VMNK+ + LT+LLNELQTF+SL+KI+G KGEANVA +R +H+GSTSGTK + SSS N
Subjt: MKVHFNIAESNGASIDESSQVSIILETLPDSFLQFRSNVVMNKL-FNLTSLLNELQTFQSLIKIQGSKGEANVA--SRSYHRGSTSGTKIVASSSSNLRG
Query: KKKNMKKVSKGKQADKVVAQKGKKVKDVVDKGKCFHCNKDGHWKRNCPKYIAEKKK--------------------------------------------
KK KK +G +A+ A+ KK K KG CFHCN++GHWKRNCPKY+AEKKK
Subjt: KKKNMKKVSKGKQADKVVAQKGKKVKDVVDKGKCFHCNKDGHWKRNCPKYIAEKKK--------------------------------------------
Query: ---EDDYSRYGPIYLMHHKSEALEKFKEFKGEVENQLGKRVKTLRSDR-----------------------APGTPQQNGVSERRNRTLLDMVRSMMSYA
DDYSRYG +YLM HK EALEKFKE+K +VEN L K +KT RSDR APGTPQQNGVSERRNRTLLDMV+SM+SYA
Subjt: ---EDDYSRYGPIYLMHHKSEALEKFKEFKGEVENQLGKRVKTLRSDR-----------------------APGTPQQNGVSERRNRTLLDMVRSMMSYA
Query: HLPSSFWGYAVETPVYILNSVPSKSVSETPFELWKGRKGSLRHFRIWGCPAHVLVTNPKKLDSRLKLCLLVGYQKETRGGLFYDPKEDKVFVSTNATFLK
HLP+SFWGYAV+T VYILN VPSKS SETP +LW G KGSLRHFRIWGCPAHVL NPKKL+ KLCL VGY K TRGG FYDPK++KVFVSTNATFL+
Subjt: HLPSSFWGYAVETPVYILNSVPSKSVSETPFELWKGRKGSLRHFRIWGCPAHVLVTNPKKLDSRLKLCLLVGYQKETRGGLFYDPKEDKVFVSTNATFLK
Query: EDHIRDHKPKCKVVLSALDGRLAKVANK---NTSTSTTVVDTSLSSQESPSQELSMPRRSWRV
EDHIR+HKP+ K+VL+ L + + + + S T VV S++ Q L PRRS RV
Subjt: EDHIRDHKPKCKVVLSALDGRLAKVANK---NTSTSTTVVDTSLSSQESPSQELSMPRRSWRV
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| A0A5A7VH46 Gag/pol protein | 3.7e-123 | 60.58 | Show/hide |
Query: MKVHFNIAESNGASIDESSQVSIILETLPDSFLQFRSNVVMNKL-FNLTSLLNELQTFQSLIKIQGSKGEANVA--SRSYHRGSTSGTKIVASSSSNLRG
M VHF++AE NGA IDE+SQVS ILE+LP+SFLQFRSN VMNK+ + LT+LLNELQTF+SL+KI+G KGEANVA +R +HRGSTSGTK + SSS N +
Subjt: MKVHFNIAESNGASIDESSQVSIILETLPDSFLQFRSNVVMNKL-FNLTSLLNELQTFQSLIKIQGSKGEANVA--SRSYHRGSTSGTKIVASSSSNLRG
Query: KKKNMKKVSKGKQADKVVAQKGKKVKDVVDKGKCFHCNKDGHWKRNCPKYIAEKKKEDDYSRYGPIYLMHHKSEALEKFKEFKGEVENQLGKRVKTLRSD
KK KK +G +A+ A+ KK K KG CFHCN++GHWKRNCPKY+AEKKK +ALEKFKE+K EVEN L K +KT RSD
Subjt: KKKNMKKVSKGKQADKVVAQKGKKVKDVVDKGKCFHCNKDGHWKRNCPKYIAEKKKEDDYSRYGPIYLMHHKSEALEKFKEFKGEVENQLGKRVKTLRSD
Query: R-----------------------APGTPQQNGVSERRNRTLLDMVRSMMSYAHLPSSFWGYAVETPVYILNSVPSKSVSETPFELWKGRKGSLRHFRIW
R APGTPQQNGVSERRNRTL DMVRSMMSYAHLP+SFWGYAV+T VYILN VPSKSV ETP +LW GRKGSLRHFRIW
Subjt: R-----------------------APGTPQQNGVSERRNRTLLDMVRSMMSYAHLPSSFWGYAVETPVYILNSVPSKSVSETPFELWKGRKGSLRHFRIW
Query: GCPAHVLVTNPKKLDSRLKLCLLVGYQKETRGGLFYDPKEDKVFVSTNATFLKEDHIRDHKPKCKVVLSALDGRLAKVANK---NTSTSTTVVDTSLSSQ
GC AHVL NPKKL+ R KLCL VGY K TRGG FYDPK++KVFVSTNATFL+EDHIR+HKP+ K+VL+ L + + + S VV S++
Subjt: GCPAHVLVTNPKKLDSRLKLCLLVGYQKETRGGLFYDPKEDKVFVSTNATFLKEDHIRDHKPKCKVVLSALDGRLAKVANK---NTSTSTTVVDTSLSSQ
Query: ESPSQELSMPRRSWRV
Q L PRRS RV
Subjt: ESPSQELSMPRRSWRV
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| A0A5D3BAN6 Gag/pol protein | 8.0e-118 | 50.48 | Show/hide |
Query: MKVHFNIAESNGASIDESSQVSIILETLPDSFLQFRSNVVMNKL-FNLTSLLNELQTFQSLIKIQGSKGEANVA--SRSYHRGSTSGTKIVASSSSNLRG
M VHFN+AE NGA IDE+S+VS IL++LP+SFLQFRSNVVMNK+ + LT+LLNELQTF+SL+KI+G KGEANVA +R +HRGSTSGTK + SSS N +
Subjt: MKVHFNIAESNGASIDESSQVSIILETLPDSFLQFRSNVVMNKL-FNLTSLLNELQTFQSLIKIQGSKGEANVA--SRSYHRGSTSGTKIVASSSSNLRG
Query: KKKNMKKVSKGKQADKV---VAQKGKKVKDVVDKGKCFHCNKDGHWKRNCPKYIAEKKK-----------------------------------------
KK +KG Q +KV A+ KK K KG FHCN++GHWKRNCPKY+AEKKK
Subjt: KKKNMKKVSKGKQADKV---VAQKGKKVKDVVDKGKCFHCNKDGHWKRNCPKYIAEKKK-----------------------------------------
Query: -------------------------------------------------------------EDDYSRYGPIYLMHHKSEALEKFKEFKGEVENQLGKRVK
DDYSRYG +YLM HKSEALEKFKE+K EVEN L K +K
Subjt: -------------------------------------------------------------EDDYSRYGPIYLMHHKSEALEKFKEFKGEVENQLGKRVK
Query: TLRSDR-----------------------APGTPQQNGVSERRNRTLLDMVRSMMSYAHLPSSFWGYAVETPVYILNSVPSKSVSETPFELWKGRKGSLR
T RSDR APGTPQQNGVSERRN+TLLDMV SMMSYAHLP+SFWGYAV+T VYILN VPSKSVSETP +LW GRKGSL
Subjt: TLRSDR-----------------------APGTPQQNGVSERRNRTLLDMVRSMMSYAHLPSSFWGYAVETPVYILNSVPSKSVSETPFELWKGRKGSLR
Query: HFRIWGCPAHVLVTNPKKLDSRLKLCLLVGYQKETRGGLFYDPKEDKVFVSTNATFLKEDHIRDHKPKCKVVLSALDGRLAKVANK---NTSTSTTVVDT
HFRI GCPAHVL N KKL+ R KLCL VGY K +RGG FYDPK++KV VSTNATFL+EDHIR+HKP+ K+VL+ L + + + S T+VV
Subjt: HFRIWGCPAHVLVTNPKKLDSRLKLCLLVGYQKETRGGLFYDPKEDKVFVSTNATFLKEDHIRDHKPKCKVVLSALDGRLAKVANK---NTSTSTTVVDT
Query: SLSSQESPSQELSMPRRSWRV
S++ Q L PRRS RV
Subjt: SLSSQESPSQELSMPRRSWRV
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 3.0e-21 | 29.91 | Show/hide |
Query: DDYSRYGPIYLMHHKSEALEKFKEFKGEVENQLGKRVKTLRSDR-----------------------APGTPQQNGVSERRNRTLLDMVRSMMSYAHLPS
D ++ Y YL+ +KS+ F++F + E +V L D P TPQ NGVSER RT+ + R+M+S A L
Subjt: DDYSRYGPIYLMHHKSEALEKFKEFKGEVENQLGKRVKTLRSDR-----------------------APGTPQQNGVSERRNRTLLDMVRSMMSYAHLPS
Query: SFWGYAVETPVYILNSVPSKSV---SETPFELWKGRKGSLRHFRIWGCPAHVLVTNPK-KLDSRLKLCLLVGYQKETRGGLFYDPKEDKVFVSTNATFLK
SFWG AV T Y++N +PS+++ S+TP+E+W +K L+H R++G +V + N + K D + + VGY E G +D +K V+ + +
Subjt: SFWGYAVETPVYILNSVPSKSV---SETPFELWKGRKGSLRHFRIWGCPAHVLVTNPK-KLDSRLKLCLLVGYQKETRGGLFYDPKEDKVFVSTNATFLK
Query: EDHIRDHKPKCKVV
+ + K + V
Subjt: EDHIRDHKPKCKVV
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.3e-28 | 32.79 | Show/hide |
Query: DDYSRYGPIYLMHHKSEALEKFKEFKGEVENQLGKRVKTLRSDR-----------------------APGTPQQNGVSERRNRTLLDMVRSMMSYAHLPS
DD SR +Y++ K + + F++F VE + G+++K LRSD PGTPQ NGV+ER NRT+++ VRSM+ A LP
Subjt: DDYSRYGPIYLMHHKSEALEKFKEFKGEVENQLGKRVKTLRSDR-----------------------APGTPQQNGVSERRNRTLLDMVRSMMSYAHLPS
Query: SFWGYAVETPVYILNSVPSKSVS-ETPFELWKGRKGSLRHFRIWGCP--AHVLVTNPKKLDSRLKLCLLVGYQKETRGGLFYDPKEDKVFVSTNATFLKE
SFWG AV+T Y++N PS ++ E P +W ++ S H +++GC AHV KLD + C+ +GY E G +DP + KV S + F +E
Subjt: SFWGYAVETPVYILNSVPSKSVS-ETPFELWKGRKGSLRHFRIWGCP--AHVLVTNPKKLDSRLKLCLLVGYQKETRGGLFYDPKEDKVFVSTNATFLKE
Query: DHIR---DHKPKCKVVLSALDGRLAKVANKNTSTSTTVVDTSLSSQE
+R D K K + + +N TS +T + S ++
Subjt: DHIR---DHKPKCKVVLSALDGRLAKVANKNTSTSTTVVDTSLSSQE
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| Q12337 Transposon Ty2-GR1 Gag-Pol polyprotein | 1.8e-05 | 23.56 | Show/hide |
Query: HWKRNCPKYIAEKKKEDDYSRYGPIYLMHHKSE--ALEKFKEFKGEVENQLGKRVKTLRSDR-----------------------APGTPQQNGVSERRN
H ++ P Y D+ +R+ +Y +H + E L F ++NQ RV ++ DR + +GV+ER N
Subjt: HWKRNCPKYIAEKKKEDDYSRYGPIYLMHHKSE--ALEKFKEFKGEVENQLGKRVKTLRSDR-----------------------APGTPQQNGVSERRN
Query: RTLLDMVRSMMSYAHLPSSFWGYAVETPVYILNSVPSKSVSETPFELWKGRKGSLRHFRIWGCP-------AHVLVTNPKKLDSRLKLCLLVGY----QK
RTLL+ R+++ + LP+ W AVE I NS+ S K RK + +H + G ++ N DS++ + GY +
Subjt: RTLLDMVRSMMSYAHLPSSFWGYAVETPVYILNSVPSKSVSETPFELWKGRKGSLRHFRIWGCP-------AHVLVTNPKKLDSRLKLCLLVGY----QK
Query: ETRGGLFYDPKEDKVFVSTNATFLK
+ G + Y P K +TN L+
Subjt: ETRGGLFYDPKEDKVFVSTNATFLK
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 7.0e-18 | 26.67 | Show/hide |
Query: DDYSRYGPIYLMHHKSEALEKFKEFKGEVENQLGKRVKTLRSDRA---------------------PGTPQQNGVSERRNRTLLDMVRSMMSYAHLPSSF
D ++RY +Y + KS+ E F FK +EN+ R+ T SD P TP+ NG+SER++R +++ +++S+A +P ++
Subjt: DDYSRYGPIYLMHHKSEALEKFKEFKGEVENQLGKRVKTLRSDRA---------------------PGTPQQNGVSERRNRTLLDMVRSMMSYAHLPSSF
Query: WGYAVETPVYILNSVPSKSVS-ETPFELWKGRKGSLRHFRIWGCPAHVLVT--NPKKLDSRLKLCLLVGYQKETRGGLFYDPKEDKVFVSTNATF
W YA VY++N +P+ + E+PF+ G + R++GC + + N KLD + + C+ +GY L + ++++S + F
Subjt: WGYAVETPVYILNSVPSKSVS-ETPFELWKGRKGSLRHFRIWGCPAHVLVT--NPKKLDSRLKLCLLVGYQKETRGGLFYDPKEDKVFVSTNATF
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 2.6e-17 | 26.67 | Show/hide |
Query: DDYSRYGPIYLMHHKSEALEKFKEFKGEVENQLGKRVKTLRSDRA---------------------PGTPQQNGVSERRNRTLLDMVRSMMSYAHLPSSF
D ++RY +Y + KS+ + F FK VEN+ R+ TL SD P TP+ NG+SER++R +++M +++S+A +P ++
Subjt: DDYSRYGPIYLMHHKSEALEKFKEFKGEVENQLGKRVKTLRSDRA---------------------PGTPQQNGVSERRNRTLLDMVRSMMSYAHLPSSF
Query: WGYAVETPVYILNSVPSKSVS-ETPFELWKGRKGSLRHFRIWGCPAHVLVT--NPKKLDSRLKLCLLVGYQKETRGGLFYDPKEDKVFVSTNATF
W YA VY++N +P+ + ++PF+ G+ + +++GC + + N KL+ + K C +GY L +++ S + F
Subjt: WGYAVETPVYILNSVPSKSVS-ETPFELWKGRKGSLRHFRIWGCPAHVLVT--NPKKLDSRLKLCLLVGYQKETRGGLFYDPKEDKVFVSTNATF
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