; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0003820 (gene) of Snake gourd v1 genome

Gene IDTan0003820
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionhigh mobility group B protein 9
Genome locationLG01:116176721..116178632
RNA-Seq ExpressionTan0003820
SyntenyTan0003820
Gene Ontology termsGO:0010197 - polar nucleus fusion (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR001606 - ARID DNA-binding domain
IPR009071 - High mobility group box domain
IPR036431 - ARID DNA-binding domain superfamily
IPR036910 - High mobility group box domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004145526.1 high mobility group B protein 9 [Cucumis sativus]2.6e-17793.79Show/hide
Query:  MSPPARTKTWNGGGDKHYPPALATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYLEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA
        MSPPARTKTWNGG DKHYPP+LATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLY EVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA
Subjt:  MSPPARTKTWNGGGDKHYPPALATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYLEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA

Query:  SFVLRKHYLSLLYHYEQVYLFGRQGPICAPQAPFSFGSPTSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQPAP
        SFVLRKHYLSLLYHYEQVYLFGRQGPIC PQAPF FGSPTSENELALVEYTPKTTSFSPGPP+EVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHP+QP P
Subjt:  SFVLRKHYLSLLYHYEQVYLFGRQGPICAPQAPFSFGSPTSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQPAP

Query:  SDLRPESTNAIVPYTGGRHRHSGRRHRRSRRRGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRE
        SDLRP STNAIVPYTGGR+RHSGRRHRRSRR+GDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERY+RE
Subjt:  SDLRPESTNAIVPYTGGRHRHSGRRHRRSRRRGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRE

Query:  LKEYKEKLRQATDIHAANYPKH
        LKEYKEK+R  T++  ANY KH
Subjt:  LKEYKEKLRQATDIHAANYPKH

XP_008452910.1 PREDICTED: high mobility group B protein 9 [Cucumis melo]2.2e-17995.03Show/hide
Query:  MSPPARTKTWNGGGDKHYPPALATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYLEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA
        MSPPARTKTWNGG DKHYPP LATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLY EVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA
Subjt:  MSPPARTKTWNGGGDKHYPPALATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYLEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA

Query:  SFVLRKHYLSLLYHYEQVYLFGRQGPICAPQAPFSFGSPTSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQPAP
        SFVLRKHYLSLLYHYEQVYLFGRQGPIC PQAPFSFGSPTSENELALVEYTPKTTSFSPGPP+EVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQP P
Subjt:  SFVLRKHYLSLLYHYEQVYLFGRQGPICAPQAPFSFGSPTSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQPAP

Query:  SDLRPESTNAIVPYTGGRHRHSGRRHRRSRRRGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRE
        SDLRP STNAIVPYTGGRHRHSGRRHRRSRR+GDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERY+RE
Subjt:  SDLRPESTNAIVPYTGGRHRHSGRRHRRSRRRGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRE

Query:  LKEYKEKLRQATDIHAANYPKH
        LKEYKEK+R  TD+  ANY KH
Subjt:  LKEYKEKLRQATDIHAANYPKH

XP_022140929.1 high mobility group B protein 9 [Momordica charantia]3.8e-17693.79Show/hide
Query:  MSPPARTKTWNGGGDKHYPPALATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYLEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA
        MSPPAR+K+WN G DKHYP ALATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLY EVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA
Subjt:  MSPPARTKTWNGGGDKHYPPALATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYLEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA

Query:  SFVLRKHYLSLLYHYEQVYLFGRQGPICAPQAPFSFGSPTSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQPAP
        SFVLRKHYLSLLYHYEQVYLF RQGPIC PQAPFSFGSP+SENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQP+P
Subjt:  SFVLRKHYLSLLYHYEQVYLFGRQGPICAPQAPFSFGSPTSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQPAP

Query:  SDLRPESTNAIVPYTGGRHRHSGRRHRRSRRRGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRE
        S+LRP+S NAIVPYTGGR RHSGRRHRRSRR+GDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEER VYQNIGLKDKERYKRE
Subjt:  SDLRPESTNAIVPYTGGRHRHSGRRHRRSRRRGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRE

Query:  LKEYKEKLRQATDIHAANYPKH
        LKEYKEK+RQATDIH  NY KH
Subjt:  LKEYKEKLRQATDIHAANYPKH

XP_022975460.1 high mobility group B protein 9 isoform X2 [Cucurbita maxima]6.7e-17393.17Show/hide
Query:  MSPPARTKTWNGGGDKHYPPALATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYLEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA
        MSPPARTK+ NGG DK YPP LATHDEV+SDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLY EVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA
Subjt:  MSPPARTKTWNGGGDKHYPPALATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYLEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA

Query:  SFVLRKHYLSLLYHYEQVYLFGRQGPICAPQAPFSFGSPTSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQPAP
        SFVLRKHYLSLLYHYEQVYLF RQGPI APQAPFSFGSPTSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLV+VKLGSEVLRGVLYHPE+P P
Subjt:  SFVLRKHYLSLLYHYEQVYLFGRQGPICAPQAPFSFGSPTSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQPAP

Query:  SDLRPESTNAIVPYTGGRHRHSGRRHRRSRRRGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRE
        SDLRP+ TNAIVPYTG RHRHSGRRHRRSRR+GDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRE
Subjt:  SDLRPESTNAIVPYTGGRHRHSGRRHRRSRRRGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRE

Query:  LKEYKEKLRQAT-DIHAANYPK
        LKEYKEK+R A+ D+HAANY K
Subjt:  LKEYKEKLRQAT-DIHAANYPK

XP_038899499.1 high mobility group B protein 9-like [Benincasa hispida]9.4e-17593.17Show/hide
Query:  MSPPARTKTWNGGGDKHYPPALATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYLEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA
        MSPPA TK+WNGG DKHYPP LATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLY EVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA
Subjt:  MSPPARTKTWNGGGDKHYPPALATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYLEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA

Query:  SFVLRKHYLSLLYHYEQVYLFGRQGPICAPQAPFSFGSPTSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQPAP
        SFVLRKHYLSLLYHYEQVYLFGRQGPIC PQAPF  GSPTSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSE+LRGVLYHPEQP P
Subjt:  SFVLRKHYLSLLYHYEQVYLFGRQGPICAPQAPFSFGSPTSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQPAP

Query:  SDLRPESTNAIVPYTGGRHRHSGRRHRRSRRRGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRE
        SDLRP+STNAIVPYTGGR+RHSGRRHRRSRR+GDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEER VYQNIGLKDKERYKRE
Subjt:  SDLRPESTNAIVPYTGGRHRHSGRRHRRSRRRGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRE

Query:  LKEYKEKLRQATDIHAANYPKH
        LKEYKEK+RQA+D+    Y KH
Subjt:  LKEYKEKLRQATDIHAANYPKH

TrEMBL top hitse value%identityAlignment
A0A0A0L181 Uncharacterized protein1.3e-17793.79Show/hide
Query:  MSPPARTKTWNGGGDKHYPPALATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYLEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA
        MSPPARTKTWNGG DKHYPP+LATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLY EVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA
Subjt:  MSPPARTKTWNGGGDKHYPPALATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYLEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA

Query:  SFVLRKHYLSLLYHYEQVYLFGRQGPICAPQAPFSFGSPTSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQPAP
        SFVLRKHYLSLLYHYEQVYLFGRQGPIC PQAPF FGSPTSENELALVEYTPKTTSFSPGPP+EVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHP+QP P
Subjt:  SFVLRKHYLSLLYHYEQVYLFGRQGPICAPQAPFSFGSPTSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQPAP

Query:  SDLRPESTNAIVPYTGGRHRHSGRRHRRSRRRGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRE
        SDLRP STNAIVPYTGGR+RHSGRRHRRSRR+GDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERY+RE
Subjt:  SDLRPESTNAIVPYTGGRHRHSGRRHRRSRRRGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRE

Query:  LKEYKEKLRQATDIHAANYPKH
        LKEYKEK+R  T++  ANY KH
Subjt:  LKEYKEKLRQATDIHAANYPKH

A0A1S3BUE9 high mobility group B protein 91.0e-17995.03Show/hide
Query:  MSPPARTKTWNGGGDKHYPPALATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYLEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA
        MSPPARTKTWNGG DKHYPP LATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLY EVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA
Subjt:  MSPPARTKTWNGGGDKHYPPALATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYLEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA

Query:  SFVLRKHYLSLLYHYEQVYLFGRQGPICAPQAPFSFGSPTSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQPAP
        SFVLRKHYLSLLYHYEQVYLFGRQGPIC PQAPFSFGSPTSENELALVEYTPKTTSFSPGPP+EVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQP P
Subjt:  SFVLRKHYLSLLYHYEQVYLFGRQGPICAPQAPFSFGSPTSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQPAP

Query:  SDLRPESTNAIVPYTGGRHRHSGRRHRRSRRRGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRE
        SDLRP STNAIVPYTGGRHRHSGRRHRRSRR+GDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERY+RE
Subjt:  SDLRPESTNAIVPYTGGRHRHSGRRHRRSRRRGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRE

Query:  LKEYKEKLRQATDIHAANYPKH
        LKEYKEK+R  TD+  ANY KH
Subjt:  LKEYKEKLRQATDIHAANYPKH

A0A5A7VAK3 High mobility group B protein 91.0e-17995.03Show/hide
Query:  MSPPARTKTWNGGGDKHYPPALATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYLEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA
        MSPPARTKTWNGG DKHYPP LATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLY EVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA
Subjt:  MSPPARTKTWNGGGDKHYPPALATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYLEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA

Query:  SFVLRKHYLSLLYHYEQVYLFGRQGPICAPQAPFSFGSPTSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQPAP
        SFVLRKHYLSLLYHYEQVYLFGRQGPIC PQAPFSFGSPTSENELALVEYTPKTTSFSPGPP+EVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQP P
Subjt:  SFVLRKHYLSLLYHYEQVYLFGRQGPICAPQAPFSFGSPTSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQPAP

Query:  SDLRPESTNAIVPYTGGRHRHSGRRHRRSRRRGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRE
        SDLRP STNAIVPYTGGRHRHSGRRHRRSRR+GDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERY+RE
Subjt:  SDLRPESTNAIVPYTGGRHRHSGRRHRRSRRRGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRE

Query:  LKEYKEKLRQATDIHAANYPKH
        LKEYKEK+R  TD+  ANY KH
Subjt:  LKEYKEKLRQATDIHAANYPKH

A0A6J1CH52 high mobility group B protein 91.8e-17693.79Show/hide
Query:  MSPPARTKTWNGGGDKHYPPALATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYLEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA
        MSPPAR+K+WN G DKHYP ALATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLY EVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA
Subjt:  MSPPARTKTWNGGGDKHYPPALATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYLEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA

Query:  SFVLRKHYLSLLYHYEQVYLFGRQGPICAPQAPFSFGSPTSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQPAP
        SFVLRKHYLSLLYHYEQVYLF RQGPIC PQAPFSFGSP+SENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQP+P
Subjt:  SFVLRKHYLSLLYHYEQVYLFGRQGPICAPQAPFSFGSPTSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQPAP

Query:  SDLRPESTNAIVPYTGGRHRHSGRRHRRSRRRGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRE
        S+LRP+S NAIVPYTGGR RHSGRRHRRSRR+GDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEER VYQNIGLKDKERYKRE
Subjt:  SDLRPESTNAIVPYTGGRHRHSGRRHRRSRRRGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRE

Query:  LKEYKEKLRQATDIHAANYPKH
        LKEYKEK+RQATDIH  NY KH
Subjt:  LKEYKEKLRQATDIHAANYPKH

E5GCD0 High mobility group family1.0e-17995.03Show/hide
Query:  MSPPARTKTWNGGGDKHYPPALATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYLEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA
        MSPPARTKTWNGG DKHYPP LATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLY EVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA
Subjt:  MSPPARTKTWNGGGDKHYPPALATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYLEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA

Query:  SFVLRKHYLSLLYHYEQVYLFGRQGPICAPQAPFSFGSPTSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQPAP
        SFVLRKHYLSLLYHYEQVYLFGRQGPIC PQAPFSFGSPTSENELALVEYTPKTTSFSPGPP+EVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQP P
Subjt:  SFVLRKHYLSLLYHYEQVYLFGRQGPICAPQAPFSFGSPTSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQPAP

Query:  SDLRPESTNAIVPYTGGRHRHSGRRHRRSRRRGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRE
        SDLRP STNAIVPYTGGRHRHSGRRHRRSRR+GDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERY+RE
Subjt:  SDLRPESTNAIVPYTGGRHRHSGRRHRRSRRRGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRE

Query:  LKEYKEKLRQATDIHAANYPKH
        LKEYKEK+R  TD+  ANY KH
Subjt:  LKEYKEKLRQATDIHAANYPKH

SwissProt top hitse value%identityAlignment
Q68CP9 AT-rich interactive domain-containing protein 22.3e-1441.18Show/hide
Query:  IVFWDTLRRFHFMMNTKF-MIPVIGGKELDLHVLYLEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYLFGRQGPICAPQ
        + F D LR+FH    + F  IP +GGKELDLH LY  VT  GG  KV  + +W E+   F F  + ++A+F L+++YL  L  YE+V+ FG       P 
Subjt:  IVFWDTLRRFHFMMNTKF-MIPVIGGKELDLHVLYLEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYLFGRQGPICAPQ

Query:  AP
         P
Subjt:  AP

Q9LG02 Putative high mobility group B protein 111.2e-4236.04Show/hide
Query:  HDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYLEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYLFGRQ
        + +++ +P +FW+ LR FH   + KF IP++GGK LDLH L+ EVT RGG EKV+ +++ +EV   F F  T T+++FVLRK YL +L+ +E +Y F   
Subjt:  HDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYLEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYLFGRQ

Query:  GPICAPQAPFSFGSPTSENELALVEYTPKTTSFSP--GPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQPAPSDLRPESTNAIVPYTGGRHRHS
              QAP S      +    L+E +      S    P   +TG IDGKF+ GYL++ K+GSE L+G+LYH        + PE+               
Subjt:  GPICAPQAPFSFGSPTSENELALVEYTPKTTSFSP--GPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQPAPSDLRPESTNAIVPYTGGRHRHS

Query:  GRRHRRSRRRGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRELKEYK
        G++  +S +      PK  R+GYNFF AE+  ++K+    ++    K  G  W NLS  +R VY     +D +RYK E+ +Y+
Subjt:  GRRHRRSRRRGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRELKEYK

Q9LTT3 High mobility group B protein 102.4e-5644.44Show/hide
Query:  ATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYLEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYLFG
        A +D+++ +  +FW+ LR F  + +    +P +GG  LDLH L++EVT RGG E+VV ++KW+EV   F F  T TSASFVLRK+YL  L+  E VY   
Subjt:  ATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYLEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYLFG

Query:  RQGPICAPQAPFSFGSPTSENELALVEYTPKTTSFSPGPPA--EVTGTIDGKFDCGYLVTVKLGSEVLRGVLYH-PEQPAPSDLRPESTNAIVPYTGGRH
                + P S    T E   +L   +P        P    EV G IDGKFD GYLVT+KLGS+ L+GVLYH P+ P+ S    E+ +AIV       
Subjt:  RQGPICAPQAPFSFGSPTSENELALVEYTPKTTSFSPGPPA--EVTGTIDGKFDCGYLVTVKLGSEVLRGVLYH-PEQPAPSDLRPESTNAIVPYTGGRH

Query:  RHSGRRHRRSRRRG--DPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRELKEYK
        + S RRHR+  +    D   PK +RSGYNFFFAE++ +LK  Y  +ER  TK IG  W+NL+  E+ VYQ+ G+KD ERY+ E+ EYK
Subjt:  RHSGRRHRRSRRRG--DPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRELKEYK

Q9MAT6 High mobility group B protein 155.5e-6945.16Show/hide
Query:  ATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYLEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYLFG
        AT++ V++DP +F  +L R H ++ TKFM+P+IGG++LDLH L++EVT RGG  K++ E++W+EV + F F PT T+AS+VLRK+Y SLL +YEQ+Y F 
Subjt:  ATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYLEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYLFG

Query:  RQG--PICAPQAP-----FSFGSPTSENELALVEYTPK----TTSFSPGPPA--EVTGTIDGKFDCGYLVTVKLGSEVLRGVLYH-PEQPAPSDLRPEST
          G  P  + Q+P     F  G+     EL  + +TP+    T  F  G  A   V G IDGKF+ GYLVTV +GSE L+GVLY    Q   S   P+ +
Subjt:  RQG--PICAPQAP-----FSFGSPTSENELALVEYTPK----TTSFSPGPPA--EVTGTIDGKFDCGYLVTVKLGSEVLRGVLYH-PEQPAPSDLRPEST

Query:  NAIVPYT-----------GGRHRHSGRRHRRSRRRGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERY
        + ++P T           GG  +   RR +   +R DP+HPKPNRSGYNFFFAE+H +LK L+P ++R+ ++MIGE WN L+ +E+++YQ   ++DKERY
Subjt:  NAIVPYT-----------GGRHRHSGRRHRRSRRRGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERY

Query:  KRELKEYKEK
        + E+++Y+EK
Subjt:  KRELKEYKEK

Q9SGS2 High mobility group B protein 96.9e-11269.18Show/hide
Query:  KHYPPALATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYLEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHY
        K YP  LA H+ V+ D  VFWDTLRRFH +M+TKFMIPVIGGKELDLHVLY+EVTRRGG+EKVV EKKWREVG VF+FS TTTSASFVLRKHYL+LL+HY
Subjt:  KHYPPALATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYLEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHY

Query:  EQVYLFGRQGPICAPQAPFSFGSPTSENELALVEYTPKTTSF-SPGPPAE------VTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQPAPSDLRPES-
        EQV+LF  +GP+  P A F   +P++  E+ALVEYTP +  + +  PP++        GTI+GKFDCGYLV VKLGSE+L GVLYH  QP PS   P + 
Subjt:  EQVYLFGRQGPICAPQAPFSFGSPTSENELALVEYTPKTTSF-SPGPPAE------VTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQPAPSDLRPES-

Query:  -TNAIVPY--TGGRHRHSGRRHRRSRRRGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRELKEY
          NA+VPY  TG R R  G+R RRSRRR DPN+PKPNRSGYNFFFAEKH KLKSLYPN+EREFTK+IGESW+NLS EERMVYQ+IGLKDKERY+REL EY
Subjt:  -TNAIVPY--TGGRHRHSGRRHRRSRRRGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRELKEY

Query:  KEKLR
        +E LR
Subjt:  KEKLR

Arabidopsis top hitse value%identityAlignment
AT1G04880.1 HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain3.9e-7045.16Show/hide
Query:  ATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYLEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYLFG
        AT++ V++DP +F  +L R H ++ TKFM+P+IGG++LDLH L++EVT RGG  K++ E++W+EV + F F PT T+AS+VLRK+Y SLL +YEQ+Y F 
Subjt:  ATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYLEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYLFG

Query:  RQG--PICAPQAP-----FSFGSPTSENELALVEYTPK----TTSFSPGPPA--EVTGTIDGKFDCGYLVTVKLGSEVLRGVLYH-PEQPAPSDLRPEST
          G  P  + Q+P     F  G+     EL  + +TP+    T  F  G  A   V G IDGKF+ GYLVTV +GSE L+GVLY    Q   S   P+ +
Subjt:  RQG--PICAPQAP-----FSFGSPTSENELALVEYTPK----TTSFSPGPPA--EVTGTIDGKFDCGYLVTVKLGSEVLRGVLYH-PEQPAPSDLRPEST

Query:  NAIVPYT-----------GGRHRHSGRRHRRSRRRGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERY
        + ++P T           GG  +   RR +   +R DP+HPKPNRSGYNFFFAE+H +LK L+P ++R+ ++MIGE WN L+ +E+++YQ   ++DKERY
Subjt:  NAIVPYT-----------GGRHRHSGRRHRRSRRRGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERY

Query:  KRELKEYKEK
        + E+++Y+EK
Subjt:  KRELKEYKEK

AT1G55650.1 HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain8.2e-4436.04Show/hide
Query:  HDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYLEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYLFGRQ
        + +++ +P +FW+ LR FH   + KF IP++GGK LDLH L+ EVT RGG EKV+ +++ +EV   F F  T T+++FVLRK YL +L+ +E +Y F   
Subjt:  HDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYLEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYLFGRQ

Query:  GPICAPQAPFSFGSPTSENELALVEYTPKTTSFSP--GPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQPAPSDLRPESTNAIVPYTGGRHRHS
              QAP S      +    L+E +      S    P   +TG IDGKF+ GYL++ K+GSE L+G+LYH        + PE+               
Subjt:  GPICAPQAPFSFGSPTSENELALVEYTPKTTSFSP--GPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQPAPSDLRPESTNAIVPYTGGRHRHS

Query:  GRRHRRSRRRGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRELKEYK
        G++  +S +      PK  R+GYNFF AE+  ++K+    ++    K  G  W NLS  +R VY     +D +RYK E+ +Y+
Subjt:  GRRHRRSRRRGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRELKEYK

AT1G76110.1 HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain4.9e-11369.18Show/hide
Query:  KHYPPALATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYLEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHY
        K YP  LA H+ V+ D  VFWDTLRRFH +M+TKFMIPVIGGKELDLHVLY+EVTRRGG+EKVV EKKWREVG VF+FS TTTSASFVLRKHYL+LL+HY
Subjt:  KHYPPALATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYLEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHY

Query:  EQVYLFGRQGPICAPQAPFSFGSPTSENELALVEYTPKTTSF-SPGPPAE------VTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQPAPSDLRPES-
        EQV+LF  +GP+  P A F   +P++  E+ALVEYTP +  + +  PP++        GTI+GKFDCGYLV VKLGSE+L GVLYH  QP PS   P + 
Subjt:  EQVYLFGRQGPICAPQAPFSFGSPTSENELALVEYTPKTTSF-SPGPPAE------VTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQPAPSDLRPES-

Query:  -TNAIVPY--TGGRHRHSGRRHRRSRRRGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRELKEY
          NA+VPY  TG R R  G+R RRSRRR DPN+PKPNRSGYNFFFAEKH KLKSLYPN+EREFTK+IGESW+NLS EERMVYQ+IGLKDKERY+REL EY
Subjt:  -TNAIVPY--TGGRHRHSGRRHRRSRRRGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRELKEY

Query:  KEKLR
        +E LR
Subjt:  KEKLR

AT3G13350.1 HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain1.7e-5744.44Show/hide
Query:  ATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYLEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYLFG
        A +D+++ +  +FW+ LR F  + +    +P +GG  LDLH L++EVT RGG E+VV ++KW+EV   F F  T TSASFVLRK+YL  L+  E VY   
Subjt:  ATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYLEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYLFG

Query:  RQGPICAPQAPFSFGSPTSENELALVEYTPKTTSFSPGPPA--EVTGTIDGKFDCGYLVTVKLGSEVLRGVLYH-PEQPAPSDLRPESTNAIVPYTGGRH
                + P S    T E   +L   +P        P    EV G IDGKFD GYLVT+KLGS+ L+GVLYH P+ P+ S    E+ +AIV       
Subjt:  RQGPICAPQAPFSFGSPTSENELALVEYTPKTTSFSPGPPA--EVTGTIDGKFDCGYLVTVKLGSEVLRGVLYH-PEQPAPSDLRPESTNAIVPYTGGRH

Query:  RHSGRRHRRSRRRG--DPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRELKEYK
        + S RRHR+  +    D   PK +RSGYNFFFAE++ +LK  Y  +ER  TK IG  W+NL+  E+ VYQ+ G+KD ERY+ E+ EYK
Subjt:  RHSGRRHRRSRRRG--DPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRELKEYK

AT3G28730.1 high mobility group7.5e-0530.49Show/hide
Query:  RHRRSRRRGDPNHPKPNRSGYNFFFAEKHYKLKSLYPN-REREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRELKEYK
        + ++ +++ DPN PK   SG+ FF   +   +K  +P     E  K++G+ W  +S +++  Y+     DK+RYK E+ +YK
Subjt:  RHRRSRRRGDPNHPKPNRSGYNFFFAEKHYKLKSLYPN-REREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRELKEYK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCACCGCCGGCGAGGACTAAGACCTGGAACGGCGGCGGGGATAAGCATTACCCACCGGCGCTGGCCACCCATGATGAAGTTATTTCCGACCCCATTGTTTTTTGGGA
CACTTTGAGGCGTTTCCATTTTATGATGAACACAAAGTTCATGATACCTGTGATTGGAGGGAAGGAGCTTGACTTGCATGTTTTATATTTAGAGGTTACAAGAAGGGGCG
GCCATGAAAAGGTTGTGGCAGAGAAGAAATGGAGGGAAGTTGGAAGTGTCTTTAAGTTTTCTCCTACGACGACGAGTGCTTCGTTTGTATTGAGAAAACATTATCTAAGT
CTTCTGTATCATTACGAGCAAGTTTACTTGTTCGGCCGGCAGGGCCCCATTTGTGCCCCTCAAGCGCCATTCTCTTTTGGTAGCCCTACGAGTGAAAACGAATTGGCTCT
GGTGGAATATACTCCCAAAACAACGTCGTTTTCGCCTGGTCCTCCTGCTGAAGTAACTGGAACAATTGATGGGAAATTCGACTGTGGTTACCTTGTGACTGTGAAATTGG
GATCTGAGGTTCTGAGAGGAGTACTTTACCATCCAGAACAGCCAGCCCCATCGGATCTACGACCCGAGTCAACTAATGCCATTGTACCTTACACCGGTGGCAGACATCGA
CATTCTGGTCGACGACACCGGAGAAGTCGGAGAAGGGGAGACCCGAATCACCCTAAGCCAAACAGAAGTGGGTACAATTTCTTCTTTGCAGAGAAGCATTACAAGCTCAA
ATCTCTGTACCCAAACAGAGAGAGGGAGTTCACTAAGATGATTGGAGAGTCTTGGAACAATCTCAGCCCTGAAGAAAGGATGGTTTATCAAAACATTGGTCTGAAAGACA
AGGAAAGATACAAGAGAGAGTTGAAAGAGTACAAGGAGAAACTAAGGCAGGCAACTGATATTCATGCAGCTAACTATCCAAAACATGTATAG
mRNA sequenceShow/hide mRNA sequence
TTTCCGGCCACTCTGTTGACCGGTCATGTCACCGCCGGCGAGGACTAAGACCTGGAACGGCGGCGGGGATAAGCATTACCCACCGGCGCTGGCCACCCATGATGAAGTTA
TTTCCGACCCCATTGTTTTTTGGGACACTTTGAGGCGTTTCCATTTTATGATGAACACAAAGTTCATGATACCTGTGATTGGAGGGAAGGAGCTTGACTTGCATGTTTTA
TATTTAGAGGTTACAAGAAGGGGCGGCCATGAAAAGGTTGTGGCAGAGAAGAAATGGAGGGAAGTTGGAAGTGTCTTTAAGTTTTCTCCTACGACGACGAGTGCTTCGTT
TGTATTGAGAAAACATTATCTAAGTCTTCTGTATCATTACGAGCAAGTTTACTTGTTCGGCCGGCAGGGCCCCATTTGTGCCCCTCAAGCGCCATTCTCTTTTGGTAGCC
CTACGAGTGAAAACGAATTGGCTCTGGTGGAATATACTCCCAAAACAACGTCGTTTTCGCCTGGTCCTCCTGCTGAAGTAACTGGAACAATTGATGGGAAATTCGACTGT
GGTTACCTTGTGACTGTGAAATTGGGATCTGAGGTTCTGAGAGGAGTACTTTACCATCCAGAACAGCCAGCCCCATCGGATCTACGACCCGAGTCAACTAATGCCATTGT
ACCTTACACCGGTGGCAGACATCGACATTCTGGTCGACGACACCGGAGAAGTCGGAGAAGGGGAGACCCGAATCACCCTAAGCCAAACAGAAGTGGGTACAATTTCTTCT
TTGCAGAGAAGCATTACAAGCTCAAATCTCTGTACCCAAACAGAGAGAGGGAGTTCACTAAGATGATTGGAGAGTCTTGGAACAATCTCAGCCCTGAAGAAAGGATGGTT
TATCAAAACATTGGTCTGAAAGACAAGGAAAGATACAAGAGAGAGTTGAAAGAGTACAAGGAGAAACTAAGGCAGGCAACTGATATTCATGCAGCTAACTATCCAAAACA
TGTATAGCAGCATAGGAG
Protein sequenceShow/hide protein sequence
MSPPARTKTWNGGGDKHYPPALATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYLEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLS
LLYHYEQVYLFGRQGPICAPQAPFSFGSPTSENELALVEYTPKTTSFSPGPPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQPAPSDLRPESTNAIVPYTGGRHR
HSGRRHRRSRRRGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYKRELKEYKEKLRQATDIHAANYPKHV