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Tan0003822 (gene) of Snake gourd v1 genome

Gene IDTan0003822
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG03:63128963..63129788
RNA-Seq ExpressionTan0003822
SyntenyTan0003822
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595568.1 hypothetical protein SDJN03_12121, partial [Cucurbita argyrosperma subsp. sororia]5.3e-1276.92Show/hide
Query:  MSSSRFGISIPILMYVALRKPSLLFRDVSLLIADLIAVAASAIRFSRSLFRPTVDVSVSVSDRYS
        MSSSRFG +IPILM VALRKPSL+FRDVSL I DLIA+AASAIRFSRSL  P V VSV+ SD  S
Subjt:  MSSSRFGISIPILMYVALRKPSLLFRDVSLLIADLIAVAASAIRFSRSLFRPTVDVSVSVSDRYS

KAG6603548.1 hypothetical protein SDJN03_04157, partial [Cucurbita argyrosperma subsp. sororia]2.8e-1369.74Show/hide
Query:  MSSSRFGISIPILMYVALRKPSLLFRDVSLLIADLIAVAASAIRFSRSLFRPTVDVSVSVSDRYSPTSLMIVRLNR
        MSSSRFG SI ILM VALRK SL+FR VS+LI DLIAVAASAIRFSR   RPT    V +S+RYS  SLMI+R +R
Subjt:  MSSSRFGISIPILMYVALRKPSLLFRDVSLLIADLIAVAASAIRFSRSLFRPTVDVSVSVSDRYSPTSLMIVRLNR

KGN54430.1 hypothetical protein Csa_012790 [Cucumis sativus]1.5e-0658.67Show/hide
Query:  RFGISIPILMY-VALRKPSLLFRDVSLLIADLIAVAASAIRFSRSLFRPTVDVSVSVSD--RYSPTSLMIVRLNR
        RFG +IPILM  V LRK  LLFR  S  I DLIA+A+SAIRF R  FR ++ V  S +D  RYSP SLMI+R +R
Subjt:  RFGISIPILMY-VALRKPSLLFRDVSLLIADLIAVAASAIRFSRSLFRPTVDVSVSVSD--RYSPTSLMIVRLNR

TrEMBL top hitse value%identityAlignment
A0A0A0KXR7 Uncharacterized protein7.3e-0758.67Show/hide
Query:  RFGISIPILMY-VALRKPSLLFRDVSLLIADLIAVAASAIRFSRSLFRPTVDVSVSVSD--RYSPTSLMIVRLNR
        RFG +IPILM  V LRK  LLFR  S  I DLIA+A+SAIRF R  FR ++ V  S +D  RYSP SLMI+R +R
Subjt:  RFGISIPILMY-VALRKPSLLFRDVSLLIADLIAVAASAIRFSRSLFRPTVDVSVSVSD--RYSPTSLMIVRLNR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGTCTTCGAGATTTGGGATTTCGATCCCAATATTGATGTATGTGGCTCTCAGAAAGCCCTCCCTCCTCTTCCGTGACGTTTCGCTCTTGATCGCCGATCTCATCGC
CGTCGCCGCCTCCGCCATCCGCTTTTCCCGCTCGCTTTTCCGGCCAACCGTCGACGTTTCCGTCTCCGTCTCCGATAGGTACTCTCCGACGTCATTGATGATCGTTCGCC
TCAATCGTTGA
mRNA sequenceShow/hide mRNA sequence
CCAGTCCTTGGATTTGACGCAGAGTAGAATGAATTAGAAAAGAAACTTGAAAAAGTTAAAAACATCTGAGAGAAAGAGAGAGAGAGAGAGAGAGAGAGATTCAGAAGAAA
CTGAACTAGGGTTGCGTTACAGAAAAGGAATGTCGTCTTCGAGATTTGGGATTTCGATCCCAATATTGATGTATGTGGCTCTCAGAAAGCCCTCCCTCCTCTTCCGTGAC
GTTTCGCTCTTGATCGCCGATCTCATCGCCGTCGCCGCCTCCGCCATCCGCTTTTCCCGCTCGCTTTTCCGGCCAACCGTCGACGTTTCCGTCTCCGTCTCCGATAGGTA
CTCTCCGACGTCATTGATGATCGTTCGCCTCAATCGTTGATTCTTAATTAATATATGATGATCAGCGGCTCTGTTTCGGTTTTCTCTTCTTGATGATTTTGATTTGGTTT
GATTCTCAACAAATTTCAGGAGGATTTTCGTTTTCTTTCTTGAAATTTATGGAAAGTTAGGTCAAAATGTGTGTGAAATCTGAAGGAATCGATTATGGTTTTCTGAAGTG
ACTTCGATTTAGGAAGATGAAGTAATTTCAGATTCGTGTTGTATTTTTGGTAATAATGTTTGGCGCTAATACAATTGCTGCTGCTAAAACATAAATCAGAGATCAAGAGA
AAAATAGTTTTAAGGTCTATTTTGGTAATGAATTTAAGTCTTATTTTCAATTTAGTCTCGCGTTTTTCTGTTCAGTTTGTTTGTCTATTTTAGCTTCTGAACTTTATAAA
AATAACCATTTTGTCTCATATTTTTATTTTTTTTCGTTTAATAAATTGATAAGGTG
Protein sequenceShow/hide protein sequence
MSSSRFGISIPILMYVALRKPSLLFRDVSLLIADLIAVAASAIRFSRSLFRPTVDVSVSVSDRYSPTSLMIVRLNR